| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is ampG4 [H]
Identifier: 87199319
GI number: 87199319
Start: 1342714
End: 1344042
Strand: Direct
Name: ampG4 [H]
Synonym: Saro_1298
Alternate gene names: 87199319
Gene position: 1342714-1344042 (Clockwise)
Preceding gene: 87199316
Following gene: 87199324
Centisome position: 37.7
GC content: 66.37
Gene sequence:
>1329_bases ATGAGCGCAGAGACGGCAGACGAGCGTAGCCTGTGGGATTCGGTGCGGCCCTATCTTGAAAAGGAATCGCTGGCCGCCTT CTTCCTCGGCGTATCCTCGGGCTTTCCCTATGCGATGATCGGCGCGACGCTGACGACGCGGCTGGCGCAGGACGGGATCG ACAAGAAGACCGTTACCGCCTTCACGCTGGCTTTCCTCGTCTACAACCTCAAGGTCTTCTGGGCCTGGCTGGTCGATGGC GTGCGCCTGCCGTTGCTGGGCAGGCTGGGGCAGCGCGTTTCGTGGATGCTGCTGGCAGGGTCGCTGGTCATGGCGGCGGT CGCCAACCTTGCGCTGGTCGATCCGGCGGCGGACCTTGGCGCGACGGTGCTTGCCGCCGTGCTGGTAGGCGTTGCGGGCG CGACGTTCGACATCGTGATCGACGCCTATCGCATCGAGACATTGAAGCCATATCAGCTCGGCACCGGTTCGGGCATGAGT CAGTACGGCTGGCGCATCGGTTCGGCCGGGGCGGGCGCGCTGGCGCTGATCGTGGCCGGGCGTTCGGGGTGGAGCGCGGC CTATCTTGCCTGCGCGCTCTTCGCGCTGCCCGCCATGCTTACCGCGCTGTTCCTGGGAGAACCCGCACGGCACCGCGAGC CGACCAGGCGGAAAGGCGTGGGCGAGGTCGTGGCATCGATCATCGGCCCGTTCGGCGAGTTCTTCCGCCGGCACGGCGCG TGGCTCGTCCTGCTGTTCATCCTCGTCCACAAGGTCGGCGACACGCTGGCGAACCTGACCTTCCGCCTGTTGTTCGACGA CCTCGGCTTCACCAACGACGAAATCGCCATCTGGGACGTGGGCGTGGGCTTCTGGGCCTACCTGATCGGCGTGTTCATCG GCGGCGTGGCCTATGCCCGGATGGGACTCAAGCGCTCTGTCCTTCTGGCGCTGGTGCTGATGGCGGTGTCGAACCTGTCG TTCGCGGCGCTCGCGGCGGCTGGTCATTCCAACATCGGCATGGCGGGCGCCATCGGCTTCGAAAACATGGCCTCGGGTTA TGGCGGCGTCGTCGTGGTCGCCTATTTCTCGGCGCTGTGCGACCTGCGCTACACCGCCGCGCAATACGCGCTGATTTCGG CCGGGGCGAGCGTGGTCGGACGTTTCGCCACCGGGACCACAGCGGGCGCGTTGATCGAGGGCATGGGCTACGTGAACTTC TACCTGCTTACGACCGTGCTGGCGCTGCCGGGCATCGTGCTGTTCTGGTGGATGAGCCGCAGCGGCCTGGTCGATGCGGC GATGGGCACGGCCGGCGAAGAGAAGTCGGACGCCGATCCGCTTACCTGA
Upstream 100 bases:
>100_bases TACGCGAGATCGCGCAATCCGTCACCCCGAGTCATCTGCATCTGGCGCCACGCGAATTGGCCGCTAGTCTGCCGCCAGCA ACGAGGGAGCAAAAGCGTCG
Downstream 100 bases:
>100_bases ACTCCAACCTTCGCTCGACACGAACGGCAGGTCAGTCGGGAATCTCTTCGTTCAGGCGCAGCACTTCGCCTGCGAGGTAG AGTGAGCCGACGATCAGGAC
Product: major facilitator transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 442; Mature: 441
Protein sequence:
>442_residues MSAETADERSLWDSVRPYLEKESLAAFFLGVSSGFPYAMIGATLTTRLAQDGIDKKTVTAFTLAFLVYNLKVFWAWLVDG VRLPLLGRLGQRVSWMLLAGSLVMAAVANLALVDPAADLGATVLAAVLVGVAGATFDIVIDAYRIETLKPYQLGTGSGMS QYGWRIGSAGAGALALIVAGRSGWSAAYLACALFALPAMLTALFLGEPARHREPTRRKGVGEVVASIIGPFGEFFRRHGA WLVLLFILVHKVGDTLANLTFRLLFDDLGFTNDEIAIWDVGVGFWAYLIGVFIGGVAYARMGLKRSVLLALVLMAVSNLS FAALAAAGHSNIGMAGAIGFENMASGYGGVVVVAYFSALCDLRYTAAQYALISAGASVVGRFATGTTAGALIEGMGYVNF YLLTTVLALPGIVLFWWMSRSGLVDAAMGTAGEEKSDADPLT
Sequences:
>Translated_442_residues MSAETADERSLWDSVRPYLEKESLAAFFLGVSSGFPYAMIGATLTTRLAQDGIDKKTVTAFTLAFLVYNLKVFWAWLVDG VRLPLLGRLGQRVSWMLLAGSLVMAAVANLALVDPAADLGATVLAAVLVGVAGATFDIVIDAYRIETLKPYQLGTGSGMS QYGWRIGSAGAGALALIVAGRSGWSAAYLACALFALPAMLTALFLGEPARHREPTRRKGVGEVVASIIGPFGEFFRRHGA WLVLLFILVHKVGDTLANLTFRLLFDDLGFTNDEIAIWDVGVGFWAYLIGVFIGGVAYARMGLKRSVLLALVLMAVSNLS FAALAAAGHSNIGMAGAIGFENMASGYGGVVVVAYFSALCDLRYTAAQYALISAGASVVGRFATGTTAGALIEGMGYVNF YLLTTVLALPGIVLFWWMSRSGLVDAAMGTAGEEKSDADPLT >Mature_441_residues SAETADERSLWDSVRPYLEKESLAAFFLGVSSGFPYAMIGATLTTRLAQDGIDKKTVTAFTLAFLVYNLKVFWAWLVDGV RLPLLGRLGQRVSWMLLAGSLVMAAVANLALVDPAADLGATVLAAVLVGVAGATFDIVIDAYRIETLKPYQLGTGSGMSQ YGWRIGSAGAGALALIVAGRSGWSAAYLACALFALPAMLTALFLGEPARHREPTRRKGVGEVVASIIGPFGEFFRRHGAW LVLLFILVHKVGDTLANLTFRLLFDDLGFTNDEIAIWDVGVGFWAYLIGVFIGGVAYARMGLKRSVLLALVLMAVSNLSF AALAAAGHSNIGMAGAIGFENMASGYGGVVVVAYFSALCDLRYTAAQYALISAGASVVGRFATGTTAGALIEGMGYVNFY LLTTVLALPGIVLFWWMSRSGLVDAAMGTAGEEKSDADPLT
Specific function: Probably Acts As A Permease In The Beta-Lactamase Induction System And In Peptidoglycan Recycling. [C]
COG id: COG0477
COG function: function code GEPR; Permeases of the major facilitator superfamily
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily [H]
Homologues:
Organism=Escherichia coli, GI1786636, Length=402, Percent_Identity=31.592039800995, Blast_Score=193, Evalue=2e-50,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 46693; Mature: 46562
Theoretical pI: Translated: 6.53; Mature: 6.53
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAETADERSLWDSVRPYLEKESLAAFFLGVSSGFPYAMIGATLTTRLAQDGIDKKTVTA CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHH FTLAFLVYNLKVFWAWLVDGVRLPLLGRLGQRVSWMLLAGSLVMAAVANLALVDPAADLG HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH ATVLAAVLVGVAGATFDIVIDAYRIETLKPYQLGTGSGMSQYGWRIGSAGAGALALIVAG HHHHHHHHHHHCCCHHHHEEEHHHHCCCCCEECCCCCCCHHHCCCCCCCCCCEEEEEEEC RSGWSAAYLACALFALPAMLTALFLGEPARHREPTRRKGVGEVVASIIGPFGEFFRRHGA CCCCHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCHHHCCHHHHHHHHHHHHHHHHHHCCH WLVLLFILVHKVGDTLANLTFRLLFDDLGFTNDEIAIWDVGVGFWAYLIGVFIGGVAYAR HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHH MGLKRSVLLALVLMAVSNLSFAALAAAGHSNIGMAGAIGFENMASGYGGVVVVAYFSALC HHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHH DLRYTAAQYALISAGASVVGRFATGTTAGALIEGMGYVNFYLLTTVLALPGIVLFWWMSR HHHHHHHHHHHHHHCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC SGLVDAAMGTAGEEKSDADPLT CCCHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure SAETADERSLWDSVRPYLEKESLAAFFLGVSSGFPYAMIGATLTTRLAQDGIDKKTVTA CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHH FTLAFLVYNLKVFWAWLVDGVRLPLLGRLGQRVSWMLLAGSLVMAAVANLALVDPAADLG HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH ATVLAAVLVGVAGATFDIVIDAYRIETLKPYQLGTGSGMSQYGWRIGSAGAGALALIVAG HHHHHHHHHHHCCCHHHHEEEHHHHCCCCCEECCCCCCCHHHCCCCCCCCCCEEEEEEEC RSGWSAAYLACALFALPAMLTALFLGEPARHREPTRRKGVGEVVASIIGPFGEFFRRHGA CCCCHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCHHHCCHHHHHHHHHHHHHHHHHHCCH WLVLLFILVHKVGDTLANLTFRLLFDDLGFTNDEIAIWDVGVGFWAYLIGVFIGGVAYAR HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHH MGLKRSVLLALVLMAVSNLSFAALAAAGHSNIGMAGAIGFENMASGYGGVVVVAYFSALC HHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHH DLRYTAAQYALISAGASVVGRFATGTTAGALIEGMGYVNFYLLTTVLALPGIVLFWWMSR HHHHHHHHHHHHHHCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC SGLVDAAMGTAGEEKSDADPLT CCCHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11557893 [H]