| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
Click here to switch to the map view.
The map label for this gene is tam [H]
Identifier: 87199299
GI number: 87199299
Start: 1318409
End: 1319236
Strand: Direct
Name: tam [H]
Synonym: Saro_1278
Alternate gene names: 87199299
Gene position: 1318409-1319236 (Clockwise)
Preceding gene: 87199297
Following gene: 87199300
Centisome position: 37.02
GC content: 67.39
Gene sequence:
>828_bases ATGACGAACATCGCGGATTGGGAGGGCGGCGTTGGCCGCAACTGGGCGGCACAGTGGAGGCGGACCGACGCGACCTTCGC GCAGCTGACGCCGCGCCTGCTCAATGCCATTGCGGCAGAGCCGGGCCGCCGCGTGGTCGACATAGGCTGCGGCGCCGGCG AAGTTTCGCTGGCGGTCGCGCGCGCCCGGCCGCAGGCGCAGGTCATCGGCGTCGACGTTTCACCAGACCTGGTGGATGCG GCGCGCGGACGGGCCGGCGCCTTGCCCAATCTCTCGTTCGAACTGGCCGATGCCTCGTCTTGGACTTCGCCGCAGGGCGC GCCCGATCTTTACGTATCGCGCCACGGCGTGATGTTCTTCCCCGATCCTCCGGCGGCCTTCGCGCATCTTGCGTCCGTCG CCGCACCGGACGCACGCTTGGTCTTCACCTGTTTTCGCGCGGCGAAGGAAAATGCCTGGGCCACCGGGATCGCCAATCTG CTGCCGCCTGCCGAGGTGCCGTCGCTACCCTTTCCTCCCGGACCATTCGCGTTTGCCGATCCGGAGCACGTCCGCCGCTG CCTCAAGGGCTGGCGCGACCTGGCCTTCACCCCGGTCGATTTCGCTTATGTCGCGGGCGAGGGAGAGCATGCCGTGGCCG AAGCCATGGCGCTGTTCCAGCGAATCGGACCCTCCGCATTCGCCTTGCGGACCCTGCCCGAAGCGGAGCGCGCGACCTTC GAAAAGCGCCTGCTCGAATTCGTAGAGGCGCACCATCAAGGCGGGCAGGTGACATTCCCTGCCGCAGCATGGCTAATTAC CGCCACGTCCGATCACGATGATGGATGA
Upstream 100 bases:
>100_bases GGGACCTGAACCGATGGTCTGCCTCATGGCCCTGAGTCGCAAGCAGAATCGCCCGCGCTTGCCGCTTGTGCGACCCGCTC CGTCGTCCTAGCCTCGATCC
Downstream 100 bases:
>100_bases AACGTGCTTGTAGCGCGCCGAACGCTCGCCTAATCGGCGGGGCATGACTTCGACGAACGAAATCCGCCGGTCCTTCCTCG AATACTTCGGCTCGAACGGG
Product: putative methyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 275; Mature: 274
Protein sequence:
>275_residues MTNIADWEGGVGRNWAAQWRRTDATFAQLTPRLLNAIAAEPGRRVVDIGCGAGEVSLAVARARPQAQVIGVDVSPDLVDA ARGRAGALPNLSFELADASSWTSPQGAPDLYVSRHGVMFFPDPPAAFAHLASVAAPDARLVFTCFRAAKENAWATGIANL LPPAEVPSLPFPPGPFAFADPEHVRRCLKGWRDLAFTPVDFAYVAGEGEHAVAEAMALFQRIGPSAFALRTLPEAERATF EKRLLEFVEAHHQGGQVTFPAAAWLITATSDHDDG
Sequences:
>Translated_275_residues MTNIADWEGGVGRNWAAQWRRTDATFAQLTPRLLNAIAAEPGRRVVDIGCGAGEVSLAVARARPQAQVIGVDVSPDLVDA ARGRAGALPNLSFELADASSWTSPQGAPDLYVSRHGVMFFPDPPAAFAHLASVAAPDARLVFTCFRAAKENAWATGIANL LPPAEVPSLPFPPGPFAFADPEHVRRCLKGWRDLAFTPVDFAYVAGEGEHAVAEAMALFQRIGPSAFALRTLPEAERATF EKRLLEFVEAHHQGGQVTFPAAAWLITATSDHDDG >Mature_274_residues TNIADWEGGVGRNWAAQWRRTDATFAQLTPRLLNAIAAEPGRRVVDIGCGAGEVSLAVARARPQAQVIGVDVSPDLVDAA RGRAGALPNLSFELADASSWTSPQGAPDLYVSRHGVMFFPDPPAAFAHLASVAAPDARLVFTCFRAAKENAWATGIANLL PPAEVPSLPFPPGPFAFADPEHVRRCLKGWRDLAFTPVDFAYVAGEGEHAVAEAMALFQRIGPSAFALRTLPEAERATFE KRLLEFVEAHHQGGQVTFPAAAWLITATSDHDDG
Specific function: Catalyzes the S-adenosylmethionine monomethyl esterification of trans-aconitate [H]
COG id: COG0500
COG function: function code QR; SAM-dependent methyltransferases
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the methyltransferase superfamily. Tam family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013216 - InterPro: IPR023149 [H]
Pfam domain/function: PF08241 Methyltransf_11 [H]
EC number: =2.1.1.144 [H]
Molecular weight: Translated: 29402; Mature: 29271
Theoretical pI: Translated: 5.32; Mature: 5.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNIADWEGGVGRNWAAQWRRTDATFAQLTPRLLNAIAAEPGRRVVDIGCGAGEVSLAVA CCCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHEEEE RARPQAQVIGVDVSPDLVDAARGRAGALPNLSFELADASSWTSPQGAPDLYVSRHGVMFF CCCCCEEEEEECCCCHHHHHHCCCCCCCCCCEEEECCCCCCCCCCCCCCEEEECCCEEEE PDPPAAFAHLASVAAPDARLVFTCFRAAKENAWATGIANLLPPAEVPSLPFPPGPFAFAD CCCCHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCC PEHVRRCLKGWRDLAFTPVDFAYVAGEGEHAVAEAMALFQRIGPSAFALRTLPEAERATF HHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCCHHHHHCCCCHHHHHH EKRLLEFVEAHHQGGQVTFPAAAWLITATSDHDDG HHHHHHHHHHHCCCCCEEECCEEEEEEECCCCCCC >Mature Secondary Structure TNIADWEGGVGRNWAAQWRRTDATFAQLTPRLLNAIAAEPGRRVVDIGCGAGEVSLAVA CCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHEEEE RARPQAQVIGVDVSPDLVDAARGRAGALPNLSFELADASSWTSPQGAPDLYVSRHGVMFF CCCCCEEEEEECCCCHHHHHHCCCCCCCCCCEEEECCCCCCCCCCCCCCEEEECCCEEEE PDPPAAFAHLASVAAPDARLVFTCFRAAKENAWATGIANLLPPAEVPSLPFPPGPFAFAD CCCCHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCC PEHVRRCLKGWRDLAFTPVDFAYVAGEGEHAVAEAMALFQRIGPSAFALRTLPEAERATF HHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCCHHHHHCCCCHHHHHH EKRLLEFVEAHHQGGQVTFPAAAWLITATSDHDDG HHHHHHHHHHHCCCCCEEECCEEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11214968 [H]