| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is 87199264
Identifier: 87199264
GI number: 87199264
Start: 1292770
End: 1293186
Strand: Direct
Name: 87199264
Synonym: Saro_1243
Alternate gene names: NA
Gene position: 1292770-1293186 (Clockwise)
Preceding gene: 87199263
Following gene: 87199265
Centisome position: 36.3
GC content: 66.67
Gene sequence:
>417_bases GTGCCCGGCTGTCCAACCGCCTGGTGCCGCGGGCGGTCGTTGCCCCGGTCAGTTGTCCGAACGATCGCGACGTTGCTGGC GGCTATCCTGACCGGACTGGCGCCCTGCCTGACGTGCGGATTGCCGACCCTGCTGGTCGCCCTGCTGGCCCATGCCATCG CTCTGCTGATTCTGCTGGCCACTCTGATCGGAGCCGCCCTGCTGGCCGCTACGGCTGCCCTGCTGATCCTGCTGCCCGCT CCGGTGCGAGCCGCCCTGCTGTGCCATGTTGCGTTCGCGCTGGGGGCCATCCTGCTGGTGACCAAGCTCGTTTCCGTTCT TGTTGTGCATCGTCTCTCTCCGCTTGGGGCCTCGATCCGGGCCCATGCCAGATTAACCGGAGCGGGCCGCGCATGTTCCG CAACTCATGGAAACTAA
Upstream 100 bases:
>100_bases GGTTGAATTTATGCATCTCTGGGGTGGTGAGGCTTTTGCGATTGCAAAGCGGCGGGACTTCCCGGGAACTGAGGGAAGTC CCGCCGCGCGCCGGGTCTAG
Downstream 100 bases:
>100_bases AAGACCTTTCGTCGCGTCCTGGGGCGGGATGATCCTTTGGCAGGGGTGGGTAGGGGGCCGTTGCTTGACCGGACCGCCAA ACTGGACTAGGGGCCCGCAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 138; Mature: 137
Protein sequence:
>138_residues MPGCPTAWCRGRSLPRSVVRTIATLLAAILTGLAPCLTCGLPTLLVALLAHAIALLILLATLIGAALLAATAALLILLPA PVRAALLCHVAFALGAILLVTKLVSVLVVHRLSPLGASIRAHARLTGAGRACSATHGN
Sequences:
>Translated_138_residues MPGCPTAWCRGRSLPRSVVRTIATLLAAILTGLAPCLTCGLPTLLVALLAHAIALLILLATLIGAALLAATAALLILLPA PVRAALLCHVAFALGAILLVTKLVSVLVVHRLSPLGASIRAHARLTGAGRACSATHGN >Mature_137_residues PGCPTAWCRGRSLPRSVVRTIATLLAAILTGLAPCLTCGLPTLLVALLAHAIALLILLATLIGAALLAATAALLILLPAP VRAALLCHVAFALGAILLVTKLVSVLVVHRLSPLGASIRAHARLTGAGRACSATHGN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13925; Mature: 13794
Theoretical pI: Translated: 11.97; Mature: 11.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.3 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 4.4 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPGCPTAWCRGRSLPRSVVRTIATLLAAILTGLAPCLTCGLPTLLVALLAHAIALLILLA CCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHH TLIGAALLAATAALLILLPAPVRAALLCHVAFALGAILLVTKLVSVLVVHRLSPLGASIR HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH AHARLTGAGRACSATHGN HHHHHCCCCCCCCCCCCC >Mature Secondary Structure PGCPTAWCRGRSLPRSVVRTIATLLAAILTGLAPCLTCGLPTLLVALLAHAIALLILLA CCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHH TLIGAALLAATAALLILLPAPVRAALLCHVAFALGAILLVTKLVSVLVVHRLSPLGASIR HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH AHARLTGAGRACSATHGN HHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA