| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is blh [H]
Identifier: 87199227
GI number: 87199227
Start: 1252859
End: 1253782
Strand: Reverse
Name: blh [H]
Synonym: Saro_1205
Alternate gene names: 87199227
Gene position: 1253782-1252859 (Counterclockwise)
Preceding gene: 87199234
Following gene: 87199226
Centisome position: 35.2
GC content: 65.04
Gene sequence:
>924_bases ATGACCGACCTGTACCTCTCCGTCGCCACCGCGCAAATCAACGCCGCGCAGGCAAAGGGCCAGGTGCCTGTCATCAGGAC CTTTTTTGACGAAGCGACCTTCACCGCCACCCATGTCGTGCACGATCCCGCGACGCGCAGGGCCGCGATCATCGATTCCG TCCTCGACTTCGACCAGCCGTCGGGGCGAACGAGCCATGCCTCGGCTGACGCCATCATTTCCTATGTCCGCGAGGAAGGC CTCGTCGTCGACTGGCTGCTCGAAACGCACGCCCATGCCGACCATCTTTCCGCCGCGCCCTATCTCAAGGAGGCGCTTGG CGGCACGATCGCCATCGGCTCGGCGATTCGGACCGTCCAGAAAGTGTTCGGCACGGTCTTCAACGAAGGCCCCGGCTTTG CCCGCGACGGCAGCCAGTTCGACGCGCTGATGGACGATGGCGACCGCTTCCGCGTGGGCACCATCGAAGCCATTGCGCTC CACGTTCCCGGCCACACCCCGGCTTGCCTTGCCTACGTCATCGGCGATGCGGTCTTCGTCGGCGATACCCTCTTCATGCC CGACTACGGCACGGCCCGCGCCGATTTTCCCGGCGGCGACGCGCGCACGCTCTACCGCTCGATCCGGCGACTGATGCAAT TGCCCTCCGAAACGCGCGTGTTCCTTTGCCACGATTACAAGGCGCCCAATCGCGACGGCTTCGTCTGGGAAACCACCATC GGCGCGGAACGGACCGCCAACGTCCACGTGCATGAAGGCGTGGCCGAAGACGATTTCGTGGCGATGCGCGAAGCTCGGGA TGCGACGCTCGGGATGCCGCGCCTGATACTCCCGTCGATCCAGGTCAACATGCGCGCCGGTCACCTTCCCGAACCGGACA CGAACGGGGTGCGCTACCTCAAGCTGCCGGTGGACCTGCTGTGA
Upstream 100 bases:
>100_bases CGGGTCACACAAGAGAGGCGGCGCCCGTGGCACTTGATTATATGATATTTTTCTTATATTCAATCTATCGAATATAAATG ACCTGCCGGAGCATCAGCCA
Downstream 100 bases:
>100_bases TCCTGCTCGATCTGCAACACCTGCTCGCCAGCCTTTCGGGCGTCCTCGTCGGGTTCGTCCTCGGGCTGGTCGGAGGCGGC GGCTCGATCCTCGCGGTGCC
Product: beta-lactamase-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 307; Mature: 306
Protein sequence:
>307_residues MTDLYLSVATAQINAAQAKGQVPVIRTFFDEATFTATHVVHDPATRRAAIIDSVLDFDQPSGRTSHASADAIISYVREEG LVVDWLLETHAHADHLSAAPYLKEALGGTIAIGSAIRTVQKVFGTVFNEGPGFARDGSQFDALMDDGDRFRVGTIEAIAL HVPGHTPACLAYVIGDAVFVGDTLFMPDYGTARADFPGGDARTLYRSIRRLMQLPSETRVFLCHDYKAPNRDGFVWETTI GAERTANVHVHEGVAEDDFVAMREARDATLGMPRLILPSIQVNMRAGHLPEPDTNGVRYLKLPVDLL
Sequences:
>Translated_307_residues MTDLYLSVATAQINAAQAKGQVPVIRTFFDEATFTATHVVHDPATRRAAIIDSVLDFDQPSGRTSHASADAIISYVREEG LVVDWLLETHAHADHLSAAPYLKEALGGTIAIGSAIRTVQKVFGTVFNEGPGFARDGSQFDALMDDGDRFRVGTIEAIAL HVPGHTPACLAYVIGDAVFVGDTLFMPDYGTARADFPGGDARTLYRSIRRLMQLPSETRVFLCHDYKAPNRDGFVWETTI GAERTANVHVHEGVAEDDFVAMREARDATLGMPRLILPSIQVNMRAGHLPEPDTNGVRYLKLPVDLL >Mature_306_residues TDLYLSVATAQINAAQAKGQVPVIRTFFDEATFTATHVVHDPATRRAAIIDSVLDFDQPSGRTSHASADAIISYVREEGL VVDWLLETHAHADHLSAAPYLKEALGGTIAIGSAIRTVQKVFGTVFNEGPGFARDGSQFDALMDDGDRFRVGTIEAIALH VPGHTPACLAYVIGDAVFVGDTLFMPDYGTARADFPGGDARTLYRSIRRLMQLPSETRVFLCHDYKAPNRDGFVWETTIG AERTANVHVHEGVAEDDFVAMREARDATLGMPRLILPSIQVNMRAGHLPEPDTNGVRYLKLPVDLL
Specific function: Unknown
COG id: COG0491
COG function: function code R; Zn-dependent hydrolases, including glyoxylases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-B beta-lactamase family [H]
Homologues:
Organism=Homo sapiens, GI41327741, Length=290, Percent_Identity=28.9655172413793, Blast_Score=107, Evalue=2e-23, Organism=Caenorhabditis elegans, GI17538952, Length=268, Percent_Identity=25.3731343283582, Blast_Score=86, Evalue=2e-17, Organism=Drosophila melanogaster, GI221330176, Length=266, Percent_Identity=30.0751879699248, Blast_Score=104, Evalue=7e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005939 - InterPro: IPR001279 [H]
Pfam domain/function: PF04273 DUF442; PF00753 Lactamase_B [H]
EC number: NA
Molecular weight: Translated: 33472; Mature: 33341
Theoretical pI: Translated: 5.32; Mature: 5.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDLYLSVATAQINAAQAKGQVPVIRTFFDEATFTATHVVHDPATRRAAIIDSVLDFDQP CCCEEEEEEEEEEEHHHHCCCCCCHHHHHCCCCEEEEEEEECCCHHHHHHHHHHHCCCCC SGRTSHASADAIISYVREEGLVVDWLLETHAHADHLSAAPYLKEALGGTIAIGSAIRTVQ CCCCCCCHHHHHHHHHHHCCCEEEEHHHHCCCHHHCCCCHHHHHHCCCEEEHHHHHHHHH KVFGTVFNEGPGFARDGSQFDALMDDGDRFRVGTIEAIALHVPGHTPACLAYVIGDAVFV HHHHHHHCCCCCCCCCCCHHHHHHCCCCEEEEEEEEEEEEECCCCCHHHHHHHHHCHHEE GDTLFMPDYGTARADFPGGDARTLYRSIRRLMQLPSETRVFLCHDYKAPNRDGFVWETTI CCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCEEEEEEC GAERTANVHVHEGVAEDDFVAMREARDATLGMPRLILPSIQVNMRAGHLPEPDTNGVRYL CCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCEECCCEEEEEECCCCCCCCCCCEEEE KLPVDLL EECCCCC >Mature Secondary Structure TDLYLSVATAQINAAQAKGQVPVIRTFFDEATFTATHVVHDPATRRAAIIDSVLDFDQP CCEEEEEEEEEEEHHHHCCCCCCHHHHHCCCCEEEEEEEECCCHHHHHHHHHHHCCCCC SGRTSHASADAIISYVREEGLVVDWLLETHAHADHLSAAPYLKEALGGTIAIGSAIRTVQ CCCCCCCHHHHHHHHHHHCCCEEEEHHHHCCCHHHCCCCHHHHHHCCCEEEHHHHHHHHH KVFGTVFNEGPGFARDGSQFDALMDDGDRFRVGTIEAIALHVPGHTPACLAYVIGDAVFV HHHHHHHCCCCCCCCCCCHHHHHHCCCCEEEEEEEEEEEEECCCCCHHHHHHHHHCHHEE GDTLFMPDYGTARADFPGGDARTLYRSIRRLMQLPSETRVFLCHDYKAPNRDGFVWETTI CCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCEEEEEEC GAERTANVHVHEGVAEDDFVAMREARDATLGMPRLILPSIQVNMRAGHLPEPDTNGVRYL CCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCEECCCEEEEEECCCCCCCCCCCEEEE KLPVDLL EECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11743193; 11743194 [H]