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The map label for this gene is 87199102

Identifier: 87199102

GI number: 87199102

Start: 1124402

End: 1125430

Strand: Reverse

Name: 87199102

Synonym: Saro_1080

Alternate gene names: NA

Gene position: 1125430-1124402 (Counterclockwise)

Preceding gene: 87199103

Following gene: 87199101

Centisome position: 31.6

GC content: 66.96

Gene sequence:

>1029_bases
ATGGACAAGAGGAAGCTGATGTTGCTGGTGGGGGCGCTGATCGTAGCGATCGGCACGGCCTTCGCAGCAAGGAGCCTTTT
CGCCGGCAATTCGACGCCCCAGGCTGAAGCCGCGGCCAAGGTGCCGACCGGCCCCAAGGTCCTCGTGGCGCAGCGCGCGC
TTCCGGTCGGCACGATCATCACAGCCGATTCAATCAACTTCCAGGCCTGGCCCAAGGACATGGTGCAGGACGCCTACTTC
GTCGAAGGCGAGGCGGACATGCAGAAGCTGCTCGGCACCGTCGTCCGCAATCCGATCACGGCGGGCGAACCGGTGACCAA
GGGCAATCTTGTCGCCCCCGGCGACCGCGGCTTCCTCGCTGCTGCTCTCGGTGCCGGCATGCGCGCCGTCACCATCCCTG
TTTCCGCACGCACCGGCGTTGCCGGCTTCGTCTTCCCGGGCGATCACATCGATCTCGTGCTGACCCAGACTGTCAAGGGC
ACGGGCGAAGGCATGGCGCTCAAGGCGTCGGAGACGATCCTCAAGAACCTGCGCGTCCTTGCCACCGACCAGTCGACCGA
ACAGGAACAGGTCGAAGGCAAGACCCGCGTCCGCACCTTCAGCACCGTCACACTCGAAGTGACGCCCAAGATCGCCGAGA
AGATTGCGGTCGCGCAGACCATCGGTACGATCAGCCTCTCGCTGCGCTCGCTGGCCGACAACTCGGCCGAGCTGGAGCAG
GCCATTGCCGCCGGCGACGTCAAGATCCCGGCAGGCGTGACCAAGCAGCAGGAAGAGGCCCTGCTCCAGCAGGCGATGAA
CCGCCCGCTGGGCGGCGGCAAGGACAGCTTCGTCACCGGCGGCGACGTCTCGCGCTTCCAGCGCAAGACCATGCCCGTCA
CGGCACCCGCAGCCGGCATGGGCGCCCCGCAGATGGCAGCCGCCACCGGCCCGCAAATGGCCTCCAACGCTGCCCCCGTT
CGCCGCGGCCCGGTCGTCCGTGTGACCCGCGGCAAGGAAACAGAATCCGTCTCGCTGGGAGGGAACTGA

Upstream 100 bases:

>100_bases
CTGGCGCTCCGTGAACGGTGCGTGAAACGCGCATATCGCAAATTTTAACCAATTTGCCCGAGACATGCGGGCCGGACTTT
AGAGGGCGGGACAACGAGTC

Downstream 100 bases:

>100_bases
CATGAAGCCCGCGCGACAGAACCAGATTGCGAAGGTCCGCACGATGAACCGCCGAATCTCCACTTCGCTCCTCACGGCCG
CCGCGCTCGCGCTGCCGCTG

Product: Flp pilus assembly CpaB

Products: NA

Alternate protein names: Flp Pilus Assembly CpaB; SAF Domain-Containing Protein; Pilus Assembly Protein CpaB; Pilus Assembly Protein; Pilus Assembly Transmembrane Protein; Flp Pilus Assembly Protein; CtpC Protein; Flp Pilus Assembly Protein Cpab; Flp Pilus Assembly Protein RcpC/CpaB; CpaB Pilus Assembly Protein; Pilus Assembly-Related Exported Protein; Fimbriae-Assembly Related Protein; Pilus Assembly Domain-Containing Protein; CpaB2 Pilus Assembly Protein; CpaB Family Protein; CpaB2 Flp Pilus Assembly Protein CpaB; Component Of Type IV Pilus; SAF Domain Protein; Flp Pilus Assembly Protein CpaB-Like Protein; Components Of Type IV Pilus

Number of amino acids: Translated: 342; Mature: 342

Protein sequence:

>342_residues
MDKRKLMLLVGALIVAIGTAFAARSLFAGNSTPQAEAAAKVPTGPKVLVAQRALPVGTIITADSINFQAWPKDMVQDAYF
VEGEADMQKLLGTVVRNPITAGEPVTKGNLVAPGDRGFLAAALGAGMRAVTIPVSARTGVAGFVFPGDHIDLVLTQTVKG
TGEGMALKASETILKNLRVLATDQSTEQEQVEGKTRVRTFSTVTLEVTPKIAEKIAVAQTIGTISLSLRSLADNSAELEQ
AIAAGDVKIPAGVTKQQEEALLQQAMNRPLGGGKDSFVTGGDVSRFQRKTMPVTAPAAGMGAPQMAAATGPQMASNAAPV
RRGPVVRVTRGKETESVSLGGN

Sequences:

>Translated_342_residues
MDKRKLMLLVGALIVAIGTAFAARSLFAGNSTPQAEAAAKVPTGPKVLVAQRALPVGTIITADSINFQAWPKDMVQDAYF
VEGEADMQKLLGTVVRNPITAGEPVTKGNLVAPGDRGFLAAALGAGMRAVTIPVSARTGVAGFVFPGDHIDLVLTQTVKG
TGEGMALKASETILKNLRVLATDQSTEQEQVEGKTRVRTFSTVTLEVTPKIAEKIAVAQTIGTISLSLRSLADNSAELEQ
AIAAGDVKIPAGVTKQQEEALLQQAMNRPLGGGKDSFVTGGDVSRFQRKTMPVTAPAAGMGAPQMAAATGPQMASNAAPV
RRGPVVRVTRGKETESVSLGGN
>Mature_342_residues
MDKRKLMLLVGALIVAIGTAFAARSLFAGNSTPQAEAAAKVPTGPKVLVAQRALPVGTIITADSINFQAWPKDMVQDAYF
VEGEADMQKLLGTVVRNPITAGEPVTKGNLVAPGDRGFLAAALGAGMRAVTIPVSARTGVAGFVFPGDHIDLVLTQTVKG
TGEGMALKASETILKNLRVLATDQSTEQEQVEGKTRVRTFSTVTLEVTPKIAEKIAVAQTIGTISLSLRSLADNSAELEQ
AIAAGDVKIPAGVTKQQEEALLQQAMNRPLGGGKDSFVTGGDVSRFQRKTMPVTAPAAGMGAPQMAAATGPQMASNAAPV
RRGPVVRVTRGKETESVSLGGN

Specific function: Unknown

COG id: COG3745

COG function: function code U; Flp pilus assembly protein CpaB

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35437; Mature: 35437

Theoretical pI: Translated: 10.30; Mature: 10.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKRKLMLLVGALIVAIGTAFAARSLFAGNSTPQAEAAAKVPTGPKVLVAQRALPVGTII
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCEEEEEECCCCCEEEE
TADSINFQAWPKDMVQDAYFVEGEADMQKLLGTVVRNPITAGEPVTKGNLVAPGDRGFLA
EECCCCCCCCCHHHHCCCEEECCHHHHHHHHHHHHCCCCCCCCCCCCCCEECCCCCCHHH
AALGAGMRAVTIPVSARTGVAGFVFPGDHIDLVLTQTVKGTGEGMALKASETILKNLRVL
HHHCCCCEEEEEEEECCCCCEEEEECCCCEEEEEEEEECCCCCCEEEEHHHHHHHCCEEE
ATDQSTEQEQVEGKTRVRTFSTVTLEVTPKIAEKIAVAQTIGTISLSLRSLADNSAELEQ
ECCCCCHHHHHCCHHHEEEEEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
AIAAGDVKIPAGVTKQQEEALLQQAMNRPLGGGKDSFVTGGDVSRFQRKTMPVTAPAAGM
HHHCCCEECCCCCCHHHHHHHHHHHHCCCCCCCCCCEEECCCHHHHHHHCCCCCCCCCCC
GAPQMAAATGPQMASNAAPVRRGPVVRVTRGKETESVSLGGN
CCCCHHHCCCCCHHCCCCCCCCCCEEEEECCCCCCEEECCCC
>Mature Secondary Structure
MDKRKLMLLVGALIVAIGTAFAARSLFAGNSTPQAEAAAKVPTGPKVLVAQRALPVGTII
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCEEEEEECCCCCEEEE
TADSINFQAWPKDMVQDAYFVEGEADMQKLLGTVVRNPITAGEPVTKGNLVAPGDRGFLA
EECCCCCCCCCHHHHCCCEEECCHHHHHHHHHHHHCCCCCCCCCCCCCCEECCCCCCHHH
AALGAGMRAVTIPVSARTGVAGFVFPGDHIDLVLTQTVKGTGEGMALKASETILKNLRVL
HHHCCCCEEEEEEEECCCCCEEEEECCCCEEEEEEEEECCCCCCEEEEHHHHHHHCCEEE
ATDQSTEQEQVEGKTRVRTFSTVTLEVTPKIAEKIAVAQTIGTISLSLRSLADNSAELEQ
ECCCCCHHHHHCCHHHEEEEEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
AIAAGDVKIPAGVTKQQEEALLQQAMNRPLGGGKDSFVTGGDVSRFQRKTMPVTAPAAGM
HHHCCCEECCCCCCHHHHHHHHHHHHCCCCCCCCCCEEECCCHHHHHHHCCCCCCCCCCC
GAPQMAAATGPQMASNAAPVRRGPVVRVTRGKETESVSLGGN
CCCCHHHCCCCCHHCCCCCCCCCCEEEEECCCCCCEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA