Definition Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome.
Accession NC_007794
Length 3,561,584

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The map label for this gene is 87199100

Identifier: 87199100

GI number: 87199100

Start: 1122095

End: 1122766

Strand: Reverse

Name: 87199100

Synonym: Saro_1078

Alternate gene names: NA

Gene position: 1122766-1122095 (Counterclockwise)

Preceding gene: 87199101

Following gene: 87199099

Centisome position: 31.52

GC content: 67.41

Gene sequence:

>672_bases
ATGCGCCACAGCCTCATCCGCGGCACCGCAAGTGCCTTCGTCCTCTCGCTCGGCATCGCCCTCTCGGCCTGCTCGTCGGT
GCCGGAGAACCGCATGCTCACCTCGGTCCACCAGCCCGTGGTGGAGCGCAACCACTTCGTCTTCGATCTCGAGACGCTGC
CCGGCGGCGGACTTTCGATCACCGAACAGCGCCGTCTCGCGGGGTGGTTCGAAAGCCTCGGCCTCAAGTACGGCGACAAG
ATCGCGGTGGACGACCCGCTCCAGTCGAAGGCCACACTGTCGGCGGTCGATGCCGTGGCAGGTCGCTGGGGGCTGATGCT
GGCCGACGGCGCCGCACCGGTCACGCCGGGCTACGTCGCGCCCGGAGCGGTCCGTGTCGTCGTGACCCGCGCGACCGCCT
CGGTGCCGGGATGCCCATCGTGGGAATACAACTCCGACATGACCCTGAACAATCACACCAGCACCAATTTCGGTTGCGCC
GTCAACAGCAACCTTGCCGCGATGGTCGCCGACAAGGAGCATCTCATCCAGGGCGCCTCGGGCACCGGCGAGACGGTCGT
GATGAGCAGCACCAAGGCCATCGACAGCTATCGCGCGGCCCGACCGACCGGAGAGGAAGGCCTCAAGAACGTCACCACGT
CCAGCGCCAGCGGCGGCTCGGGAGGGAACTGA

Upstream 100 bases:

>100_bases
AACTCGACGTGCCCACCACGCCGGCCGACCGCAAGAAGGTCGCCGCCGCGCCTGCCGCCGCCGAACCCGGCTTCAGCATC
CAGTGAGAAAGGGACAAGCC

Downstream 100 bases:

>100_bases
TACCATGAGCTGGAAGAACGCAAACCGCGACGCCTTCGCTGCCTTCATGTGCGACGAGAACGCGCTGGACATGCTCCGGC
CGGTGGTCGTCGACATGGGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 223; Mature: 223

Protein sequence:

>223_residues
MRHSLIRGTASAFVLSLGIALSACSSVPENRMLTSVHQPVVERNHFVFDLETLPGGGLSITEQRRLAGWFESLGLKYGDK
IAVDDPLQSKATLSAVDAVAGRWGLMLADGAAPVTPGYVAPGAVRVVVTRATASVPGCPSWEYNSDMTLNNHTSTNFGCA
VNSNLAAMVADKEHLIQGASGTGETVVMSSTKAIDSYRAARPTGEEGLKNVTTSSASGGSGGN

Sequences:

>Translated_223_residues
MRHSLIRGTASAFVLSLGIALSACSSVPENRMLTSVHQPVVERNHFVFDLETLPGGGLSITEQRRLAGWFESLGLKYGDK
IAVDDPLQSKATLSAVDAVAGRWGLMLADGAAPVTPGYVAPGAVRVVVTRATASVPGCPSWEYNSDMTLNNHTSTNFGCA
VNSNLAAMVADKEHLIQGASGTGETVVMSSTKAIDSYRAARPTGEEGLKNVTTSSASGGSGGN
>Mature_223_residues
MRHSLIRGTASAFVLSLGIALSACSSVPENRMLTSVHQPVVERNHFVFDLETLPGGGLSITEQRRLAGWFESLGLKYGDK
IAVDDPLQSKATLSAVDAVAGRWGLMLADGAAPVTPGYVAPGAVRVVVTRATASVPGCPSWEYNSDMTLNNHTSTNFGCA
VNSNLAAMVADKEHLIQGASGTGETVVMSSTKAIDSYRAARPTGEEGLKNVTTSSASGGSGGN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23123; Mature: 23123

Theoretical pI: Translated: 6.67; Mature: 6.67

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRHSLIRGTASAFVLSLGIALSACSSVPENRMLTSVHQPVVERNHFVFDLETLPGGGLSI
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCCH
TEQRRLAGWFESLGLKYGDKIAVDDPLQSKATLSAVDAVAGRWGLMLADGAAPVTPGYVA
HHHHHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHHHCCCCEEEECCCCCCCCCCCC
PGAVRVVVTRATASVPGCPSWEYNSDMTLNNHTSTNFGCAVNSNLAAMVADKEHLIQGAS
CCEEEEEEEECCCCCCCCCCCCCCCCCEECCCCCCCCCEEECCCEEEEEECHHHHHCCCC
GTGETVVMSSTKAIDSYRAARPTGEEGLKNVTTSSASGGSGGN
CCCCEEEEECHHHHHHHHCCCCCCHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MRHSLIRGTASAFVLSLGIALSACSSVPENRMLTSVHQPVVERNHFVFDLETLPGGGLSI
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCCH
TEQRRLAGWFESLGLKYGDKIAVDDPLQSKATLSAVDAVAGRWGLMLADGAAPVTPGYVA
HHHHHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHHHCCCCEEEECCCCCCCCCCCC
PGAVRVVVTRATASVPGCPSWEYNSDMTLNNHTSTNFGCAVNSNLAAMVADKEHLIQGAS
CCEEEEEEEECCCCCCCCCCCCCCCCCEECCCCCCCCCEEECCCEEEEEECHHHHHCCCC
GTGETVVMSSTKAIDSYRAARPTGEEGLKNVTTSSASGGSGGN
CCCCEEEEECHHHHHHHHCCCCCCHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA