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The map label for this gene is 87199098

Identifier: 87199098

GI number: 87199098

Start: 1119798

End: 1120772

Strand: Reverse

Name: 87199098

Synonym: Saro_1076

Alternate gene names: NA

Gene position: 1120772-1119798 (Counterclockwise)

Preceding gene: 87199099

Following gene: 87199097

Centisome position: 31.47

GC content: 63.49

Gene sequence:

>975_bases
ATGACCAGCATTATCCAGCTTCTGCTGATGTCCACCGGGCTGATGGTGGCGATGGTGCTGGGCTATGCCGCGCTGTCCGG
TCCATCGGCCTCGAAGGAAGTCAACCGGCGCCTCCAGTCGGTCCGCTTCCGTCACTCGGAAAGTACGCTGGACAAGGTCG
AAGCGCAGTATCGCAAGACGCTCGCCGCGCGCAAGCCGAAGACCATGAGGCCCGCCGGGTCTTCGTCGCGGCTCGAGGCG
CTCGAACTGCGCCTGCACCGCACCGGCAAGGGCTGGACGCTTTCGCAGTACCTCTACGTCAGCGGCGGCCTCGCCATTCT
GATCTTCCTGCTGGTGTACCTGCGCACAGGCGCGCCTCTGCTGGCGCTCGGTTCCGGCATTTTCATCGGCGGCGGCCTTC
CCCACATGCTGGTCGGTCGTGCGATCAACAAGCGGATCGACAACTTCGTCACCCGCCTGCCCGATGCCCTGGACCTGCTG
GTACGCGGCCTGCGCTCGGGCCTGCCCGTCACCGAAACGCTCGGCGTCGTCGCGGCCGAACTGCCGGGCCCGGTGGGCGA
GGAGTTCAAGCTGGTGACCGACCGCATCAAGGTGGGCCGCACGATGGAAGAGGCTCTCCAGGACACGGCGGACCGGTTGA
ACCTGCCGGAATTCAACTTCTTCTGCATCACGCTGGCGATCCAGCGCGAGACGGGCGGCAACCTCGCGGAAACGCTGTCG
AACCTGTCCGACGTGCTGCGCAAGCGCGCACAGATGAAGTTGAAGATCAAGGCGATGAGTTCGGAATCGAAAGCCTCGGC
GTATATCGTCGGCGCCCTGCCCTTCATCGTCTTCGCCCTGATCTACTGGATCAACCCGGTCTATCTCGGAAAGTTCTTTG
TGGACGAACGCCTCATCATCGCCGGCCTTGGCGGCCTGACCTGGCTCGGTATCGGAGCCTTCATCATGGCCAAGATGGTC
AGCTTCGAAATCTGA

Upstream 100 bases:

>100_bases
AAGTTCGACCTGAAGAAGATGCTTGCGCCCAAGGCCCGCGCGGGCGCGCCGGCCTGACTCCCCCGGCGTGAACTAGAGAT
GTGACAGGAAGACACCGGCG

Downstream 100 bases:

>100_bases
GCGGGAGAGGCAAGGCGCTATGACAAGGACTCCCCCCGGACCGACGCTGCTCGGCTTCGACGTCTACTTCGTCGGCTCGA
TTCTCGTGGCCATCGCGGCT

Product: type II secretion system protein

Products: NA

Alternate protein names: Flp Pilus Assembly Protein TadB; Type II Secretion System F Domain Protein; Pilus Assembly Protein; Integral Membrane Protein; Type II Secretion System F Domain-Containing Protein; Flp Pilus Assembly Protein; TadB Protein; Type II Secretion System Protein F; Bacterial Type II Secretion System Protein F Domain; Pilus Assembly Protein TadB; Type II/IV Secretion System Protein TadC Subfamily; Type II Secretion System F Domain; Tad Secretion System Pilus Assembly Protein; Bacterial Type II Secretion System Protein F; Secretion System Protein; Type II Secretion System; Flp Pilus Assembly Protein Tadb; Type II Secretion System Protein F Domain; Tight Adherance Operon Protein B; Secretion System Protein TadB; Tight Adherence TadB-Related Transmembrane Protein; Bacterial Type II Secretion System Protein F Domain Protein; Flp Pilus Assembly Protein TadC; TadB-Like Pilus Assembly Protein; Type II Secretion System F Protein; Tad Secretion System Secretion Accessory Protein; Component Of Type IV Pilus; Type II Secretion System Integral Membrane Subunit; Tight Adherence TadB-Like Transmembrane Protein; Tight Adherance Operon Protein; Components Of Type IV Pilus; TadC Family Type II/IV Secretion System Protein

Number of amino acids: Translated: 324; Mature: 323

Protein sequence:

>324_residues
MTSIIQLLLMSTGLMVAMVLGYAALSGPSASKEVNRRLQSVRFRHSESTLDKVEAQYRKTLAARKPKTMRPAGSSSRLEA
LELRLHRTGKGWTLSQYLYVSGGLAILIFLLVYLRTGAPLLALGSGIFIGGGLPHMLVGRAINKRIDNFVTRLPDALDLL
VRGLRSGLPVTETLGVVAAELPGPVGEEFKLVTDRIKVGRTMEEALQDTADRLNLPEFNFFCITLAIQRETGGNLAETLS
NLSDVLRKRAQMKLKIKAMSSESKASAYIVGALPFIVFALIYWINPVYLGKFFVDERLIIAGLGGLTWLGIGAFIMAKMV
SFEI

Sequences:

>Translated_324_residues
MTSIIQLLLMSTGLMVAMVLGYAALSGPSASKEVNRRLQSVRFRHSESTLDKVEAQYRKTLAARKPKTMRPAGSSSRLEA
LELRLHRTGKGWTLSQYLYVSGGLAILIFLLVYLRTGAPLLALGSGIFIGGGLPHMLVGRAINKRIDNFVTRLPDALDLL
VRGLRSGLPVTETLGVVAAELPGPVGEEFKLVTDRIKVGRTMEEALQDTADRLNLPEFNFFCITLAIQRETGGNLAETLS
NLSDVLRKRAQMKLKIKAMSSESKASAYIVGALPFIVFALIYWINPVYLGKFFVDERLIIAGLGGLTWLGIGAFIMAKMV
SFEI
>Mature_323_residues
TSIIQLLLMSTGLMVAMVLGYAALSGPSASKEVNRRLQSVRFRHSESTLDKVEAQYRKTLAARKPKTMRPAGSSSRLEAL
ELRLHRTGKGWTLSQYLYVSGGLAILIFLLVYLRTGAPLLALGSGIFIGGGLPHMLVGRAINKRIDNFVTRLPDALDLLV
RGLRSGLPVTETLGVVAAELPGPVGEEFKLVTDRIKVGRTMEEALQDTADRLNLPEFNFFCITLAIQRETGGNLAETLSN
LSDVLRKRAQMKLKIKAMSSESKASAYIVGALPFIVFALIYWINPVYLGKFFVDERLIIAGLGGLTWLGIGAFIMAKMVS
FEI

Specific function: Unknown

COG id: COG4965

COG function: function code U; Flp pilus assembly protein TadB

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35474; Mature: 35342

Theoretical pI: Translated: 10.48; Mature: 10.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSIIQLLLMSTGLMVAMVLGYAALSGPSASKEVNRRLQSVRFRHSESTLDKVEAQYRKT
CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
LAARKPKTMRPAGSSSRLEALELRLHRTGKGWTLSQYLYVSGGLAILIFLLVYLRTGAPL
HHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHCCCHHHHHHHHHHHHCCCCC
LALGSGIFIGGGLPHMLVGRAINKRIDNFVTRLPDALDLLVRGLRSGLPVTETLGVVAAE
EECCCCEEECCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHH
LPGPVGEEFKLVTDRIKVGRTMEEALQDTADRLNLPEFNFFCITLAIQRETGGNLAETLS
CCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCCHHHHHH
NLSDVLRKRAQMKLKIKAMSSESKASAYIVGALPFIVFALIYWINPVYLGKFFVDERLII
HHHHHHHHHHHHEEEEEECCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEE
AGLGGLTWLGIGAFIMAKMVSFEI
ECCCHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TSIIQLLLMSTGLMVAMVLGYAALSGPSASKEVNRRLQSVRFRHSESTLDKVEAQYRKT
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
LAARKPKTMRPAGSSSRLEALELRLHRTGKGWTLSQYLYVSGGLAILIFLLVYLRTGAPL
HHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHCCCHHHHHHHHHHHHCCCCC
LALGSGIFIGGGLPHMLVGRAINKRIDNFVTRLPDALDLLVRGLRSGLPVTETLGVVAAE
EECCCCEEECCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHH
LPGPVGEEFKLVTDRIKVGRTMEEALQDTADRLNLPEFNFFCITLAIQRETGGNLAETLS
CCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCCHHHHHH
NLSDVLRKRAQMKLKIKAMSSESKASAYIVGALPFIVFALIYWINPVYLGKFFVDERLII
HHHHHHHHHHHHEEEEEECCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEE
AGLGGLTWLGIGAFIMAKMVSFEI
ECCCHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA