Definition Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome.
Accession NC_007794
Length 3,561,584

Click here to switch to the map view.

The map label for this gene is 87198852

Identifier: 87198852

GI number: 87198852

Start: 881925

End: 882587

Strand: Reverse

Name: 87198852

Synonym: Saro_0830

Alternate gene names: NA

Gene position: 882587-881925 (Counterclockwise)

Preceding gene: 87198858

Following gene: 87198851

Centisome position: 24.78

GC content: 69.83

Gene sequence:

>663_bases
ATGAAAGGTCTGATTATAATGAACAAGTACCTCATCCCGGTCGCATCGGTACTCGCACTCGCCACGGCATCGGCCGTCGC
CGCACAGAGCACCTCGACCACCACCACGACTTCGAACGGCATCGGCGCTGACGTCAGCGTGATGGCCAAGGCACAGAAGG
ACGGCGAGACCAAGGGCATCGGCGCCGACGTCTCCGCCAAGGCCCACGCGCGCAACGCGACCAAGGCCGAAAGCCGCACC
GGCACCAAGGACGACAGCGACCTTGACGACGTCGCGACTTCTGACGCCGTGACGAACGCCACCTCGACCGACGCAAGCCT
CGACGCCAAGGTTTCGGGCCGCGATCACGCCGCCGCGGGCTCTGCGGCAGTGGATGCGGCCGCCGTGGCCGCCGCGCGCG
GCGCAAACTCGGCAGTCAAGGACGGCACCGGCGCGGTGGCGAGCCTGCGCGACAGCGTTTCGGCATCGACCGATGCCAGG
GCCAGCGGTTCGGCGGCCCGGCAGTCGGCAACCGATGCCCGCCTGACCGCCAGCGCCGCCCGCTCGTCCGCGACTGACGT
GCGCGCCGCAGCGAGCGACGCGCGGAGCAATGCCGCAGCCGTCCGCGACACCGCGACCGCCGTCAAGGACACCGTCCGTT
CGGCTCTTCCGGGCCGCAACTGA

Upstream 100 bases:

>100_bases
TGCAACCGGTGAGCGGTGACCGCCAACGGGAACGCCCGCCCATCCCACAGGTTCATCGCCTCGCAACACTCCAGCAACAA
ACGGGGGAAGGCACGGGGGC

Downstream 100 bases:

>100_bases
CGTCTGACAGACACCGGAGCGAGGGCGGGTCCGAAAGGGTCCGCCCTCTTTCGCATGAGGGGCAAATATCATGAAGAAAA
TCACGCGCATCGCCCTGGCC

Product: cell wall surface anchor family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 220; Mature: 220

Protein sequence:

>220_residues
MKGLIIMNKYLIPVASVLALATASAVAAQSTSTTTTTSNGIGADVSVMAKAQKDGETKGIGADVSAKAHARNATKAESRT
GTKDDSDLDDVATSDAVTNATSTDASLDAKVSGRDHAAAGSAAVDAAAVAAARGANSAVKDGTGAVASLRDSVSASTDAR
ASGSAARQSATDARLTASAARSSATDVRAAASDARSNAAAVRDTATAVKDTVRSALPGRN

Sequences:

>Translated_220_residues
MKGLIIMNKYLIPVASVLALATASAVAAQSTSTTTTTSNGIGADVSVMAKAQKDGETKGIGADVSAKAHARNATKAESRT
GTKDDSDLDDVATSDAVTNATSTDASLDAKVSGRDHAAAGSAAVDAAAVAAARGANSAVKDGTGAVASLRDSVSASTDAR
ASGSAARQSATDARLTASAARSSATDVRAAASDARSNAAAVRDTATAVKDTVRSALPGRN
>Mature_220_residues
MKGLIIMNKYLIPVASVLALATASAVAAQSTSTTTTTSNGIGADVSVMAKAQKDGETKGIGADVSAKAHARNATKAESRT
GTKDDSDLDDVATSDAVTNATSTDASLDAKVSGRDHAAAGSAAVDAAAVAAARGANSAVKDGTGAVASLRDSVSASTDAR
ASGSAARQSATDARLTASAARSSATDVRAAASDARSNAAAVRDTATAVKDTVRSALPGRN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21480; Mature: 21480

Theoretical pI: Translated: 9.68; Mature: 9.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKGLIIMNKYLIPVASVLALATASAVAAQSTSTTTTTSNGIGADVSVMAKAQKDGETKGI
CCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCC
GADVSAKAHARNATKAESRTGTKDDSDLDDVATSDAVTNATSTDASLDAKVSGRDHAAAG
CCCCCCHHHHCCCHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCEEECCCCCCCCC
SAAVDAAAVAAARGANSAVKDGTGAVASLRDSVSASTDARASGSAARQSATDARLTASAA
CHHHHHHHHHHHCCCCCHHHCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHH
RSSATDVRAAASDARSNAAAVRDTATAVKDTVRSALPGRN
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MKGLIIMNKYLIPVASVLALATASAVAAQSTSTTTTTSNGIGADVSVMAKAQKDGETKGI
CCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCC
GADVSAKAHARNATKAESRTGTKDDSDLDDVATSDAVTNATSTDASLDAKVSGRDHAAAG
CCCCCCHHHHCCCHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCEEECCCCCCCCC
SAAVDAAAVAAARGANSAVKDGTGAVASLRDSVSASTDARASGSAARQSATDARLTASAA
CHHHHHHHHHHHCCCCCHHHCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHH
RSSATDVRAAASDARSNAAAVRDTATAVKDTVRSALPGRN
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA