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The map label for this gene is 87198812

Identifier: 87198812

GI number: 87198812

Start: 839311

End: 839643

Strand: Reverse

Name: 87198812

Synonym: Saro_0790

Alternate gene names: NA

Gene position: 839643-839311 (Counterclockwise)

Preceding gene: 87198815

Following gene: 87198806

Centisome position: 23.57

GC content: 63.06

Gene sequence:

>333_bases
ATGCGCAAAGCCCTGCAGCGCCACGGATCTCCTGAGCGGGTCACCACCGGCGGTCTGCGCTCGTACCGCGCGGCGATGAC
CGAGCTCGGTTGCGAGGACGAGCAGGAAATCGGCAGATGGGCGAACAACCGGGTCGAGAACAGCCACCTGCCCTTCCGAC
GACGAGAGCGTGCCATGCTCCGCTTCAGGCAGATGAAGGCGCTACAGGAATTCGCCTTGATGCACGCCTCGCTCCACAAC
CACTTTTCCCAGGAACGCGACCTCGTCGATCGACAGACCTTCAAGCAGCGACGCTCGGCAGCTCTTGCCGAGTGGCAATC
ACTCGCATCCTGA

Upstream 100 bases:

>100_bases
GGGGACTAGCGTCTGCACCATTTTAGCGCATTTCTAGCCGCAGCAGCTACGTCAACAGGATGAAAGATGAGAAGAAGGTG
CATCCTCATCGGGGACCTTC

Downstream 100 bases:

>100_bases
AGTCTGGCCGCCCCCGGGACCACTTTGCCGGCTGAGAACGTTTCGCTTTAGACTGACAGCTTCCTTTGTCCTACAACCGA
CGAGCAAGGGTACTGATCGC

Product: transposase

Products: NA

Alternate protein names: Integrase Catalytic Subunit; ISHne6 Transposase; IS6 Family Transposase

Number of amino acids: Translated: 110; Mature: 110

Protein sequence:

>110_residues
MRKALQRHGSPERVTTGGLRSYRAAMTELGCEDEQEIGRWANNRVENSHLPFRRRERAMLRFRQMKALQEFALMHASLHN
HFSQERDLVDRQTFKQRRSAALAEWQSLAS

Sequences:

>Translated_110_residues
MRKALQRHGSPERVTTGGLRSYRAAMTELGCEDEQEIGRWANNRVENSHLPFRRRERAMLRFRQMKALQEFALMHASLHN
HFSQERDLVDRQTFKQRRSAALAEWQSLAS
>Mature_110_residues
MRKALQRHGSPERVTTGGLRSYRAAMTELGCEDEQEIGRWANNRVENSHLPFRRRERAMLRFRQMKALQEFALMHASLHN
HFSQERDLVDRQTFKQRRSAALAEWQSLAS

Specific function: Unknown

COG id: COG3316

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12981; Mature: 12981

Theoretical pI: Translated: 11.50; Mature: 11.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKALQRHGSPERVTTGGLRSYRAAMTELGCEDEQEIGRWANNRVENSHLPFRRRERAML
CCCCHHHCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHH
RFRQMKALQEFALMHASLHNHFSQERDLVDRQTFKQRRSAALAEWQSLAS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MRKALQRHGSPERVTTGGLRSYRAAMTELGCEDEQEIGRWANNRVENSHLPFRRRERAML
CCCCHHHCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHH
RFRQMKALQEFALMHASLHNHFSQERDLVDRQTFKQRRSAALAEWQSLAS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA