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The map label for this gene is 87198787

Identifier: 87198787

GI number: 87198787

Start: 813526

End: 816048

Strand: Reverse

Name: 87198787

Synonym: Saro_0764

Alternate gene names: NA

Gene position: 816048-813526 (Counterclockwise)

Preceding gene: 87198788

Following gene: 87198786

Centisome position: 22.91

GC content: 60.36

Gene sequence:

>2523_bases
ATGGCAACTGATATTCGCACGGCATCGTTGATCTCCGCCAGCGTTGCGGCGCTGTGCAGCGTACATCCAGTGCGCGCAGA
GGCGTTTACCTCCAGTTCGGGTGTCGCCAGCGATATTGCCGCAACAGACAGTCAGTCAGACGGGGGCGGAAGCGCCCGAA
GCATTCCGCTCAATCCTACTGGACGCGACATTGTGCTCACCGTTCCTGCAAAGGACGGCGCCACCTACCTCGGGGACGTT
CCGCTCAGGATCGCGGCGGACGACACGCTGTCGTTTCCGGCGGATCGCACGCTGCAATTGCTTGAGCCTATCCTCGACCC
CGAGGTGCTCAAGGCGCTCCGCAACGGTCTTGGCGGACGAGCCCGGATCGGACCTGCCGATCTTGCACCATCGGGCGTAG
TCGTCGTTTATGATCCCCAGACCCTGGAATTGCGGTTCCAGATCCCGGTCGAACGCAGAGCCTCGCGGTCGGTGGCAGTC
TCCCCGCTGGACAGGAGCCTGTTCGGCGAAGTTGTCCAACCCCAGAATTTCAGCGCTTATCTCAATATTCGCGGCTCGCT
CGACTACGTCGAAGGCGGCTTCAGTCAGGGCTTCGCCGATCCGGTTCTGCTGCTGGACGGTGCGGCACGATTGGGGCCGG
TTGTGGCAGAGTCAGACGCAATCTGGATCCCCGGCGCGCGGGGAGCGGACTTCCAGAGACTCGGCAGTCGATTGGTCTAT
GACGACACACACAACCTGATCCGGTTCACGGCTGGCGATCTCGAGACCACGTCGCGAGGATTCCAGACCTCACCGGACAT
AGCCGGTGTTTCGATCTTCCGCTCCTACAGCGTACTCAATCCGCAACAGATCATCCGGCCGCGTGGCGATCGGCAGTTCC
GTCTGGATCGTCCGTCAACCGTGGAAGTGGTTGTCAACGGCCAGCAAGTCCGGCGGCTTCAACTGGCACCAGGCAACTAC
GATTTGCGCGACTTCCCGTTCACGCAAGGGGCAAATGATGTTCGTTTGAACGTTCTTGACGACACTGGTCGGACAGAGGT
CCTTCGCTTCAATATCTTCCTCGACCAGACCCAACTGGCCAAAGGGCTGAGCGAGTTCGGTCTTTACGCGGGGGTGAAGG
CTCCGTTGGGCGTGCGAGGCCCTGTCTACAGCAACGACTGGATATCTTCCGGCTTCTACCGGCGCGGGATCACTGACTAC
GTCACTCTCGGCGTGAATTTCCAGGCCGACAAGCAGACCAGGATGGCCGGGGTCGAAGGTGTCCTGGCGACATCCATCGG
CATCTTTGGTTTCAATGCAGCCTACAGCCACGCCGATGGGATCGGCGACGGCCGGGCTGTGCAAGCAACATTTCAGCGCC
AGGTCCAGCGGGGCAACGGTCAGTCGGACACGTTCAACCTGTTCGTTGAATCGCGCAGCCAGAAGTTTGCTCCAGTGACC
TTCTTTCTGCCGAACAATCCATACGAGTTTGAAGTCGGTGGCGGTTACCAGCGCACGTTCACGAACGATTTTTACGCGGG
TGTCGACGCGAGATACTCGAAAGGGCGCGGAGGCCGACCCGACGTCCAGAACTATCGTGTTACCGGGGGCTGGCGGATCA
GCAATTCGGCAACCCTTTCGGCCGAGAGCCGTTACCAGAAGGATTTGCGCGGCGACGAGTTCAGCGCATTTCTCTCGTTG
ACGATCCGGCTTGGACGCTATTCCAGCGCGCGCGTCGATCACGACACCCGCGACAACCGAACTCGCGCTTCGTTCCAGAC
ATTGCATGGCTCCGGTGTAGGCAGCTACAACCTGAGCGCAGATGCCGAGCGCTCCGACTTCGGCTCGGCACTCAATTTCA
ATGGCAACTATTTCACCAATCGTGCGGAACTAGGGATTAGTCATTTCGGCACGTTCGCAGGAGATTTTGGAACCAGCCTG
AATCAGCGGACCAGCTTGCGGCTCGGCACGTCCCTGTCGATTGCGGGCGATCAGGCCTCGATCGGACGGCCGATTTACGA
CAGCTTCGCGGTGGTCAAGCCACACAAGCGTCTCAAGGGCGCCGATGTGATCGTCGAGCCCACGTCGTTCGGCTATACTG
CGAAAAGCGGAGCCTTGGGCGCGGCGACAATGCCGAGCCTCTCATCCTACGCGGAACGGACTGTAACTGTCGATGTCGCC
AACGCTCCGGCAGGCACCGACATCGGCCAGGGCTCCTTCCGTGTCTTCCCGCCCTATCGCAGCGGTTTCTTGCTCGAGGT
CGGTTCGGACTACGGGGTGACGGCAATCGGCACGATGGTCGACGCCGATGGTGCGCCGGTTTCGCTGGTTTCCGGCACCG
CGACGGAACTTGCCCATCCTGACCGTCCACCCGTCACGTTGTTTACAAACCGACAGGGACGTTTCGGAGCCACTGGCCTT
GCCCCCGGAAAATGGAGGCTCGAAATGCTGGACGAGAAGAAATCGACGTTCGAGATCAACATACCGGAAAGCACCGACGG
TATCATCCGGCTCGGCCAGATTGCGCCGGCAGAGGGACAGTAA

Upstream 100 bases:

>100_bases
GCCTGATTGGCGCAAACCAGGAGCGACGCGTGACGGTGCCCGTCGAGCTTCCGAGCGCAGAGGGTTCGGTTGAGGCCACA
TTCAGTCCTGGGGACTGAGG

Downstream 100 bases:

>100_bases
GATGGGTATCTCCAAATTCCTAAGGCGCACCGCAATCGCCGTCGCGACGGTTGCTGCTTCGGTCAGTGGTGTGGCCCACG
CCGCAACGTGCGGCATCCTC

Product: hypothetical protein

Products: NA

Alternate protein names: Fimbrial Usher Protein; P Pilus Assembly Protein Porin PapC; Fimbrial Biogenesis Protein; Type 1 Pili Usher Protein CsuD; Outer Membrane Usher Transmembrane Protein; Type I Pili; Type 1 Pili Usher Protein FimD; Porin Protein Involved In Fimbrial Biogenesis; Type I Pili Usher Protein CsuD; P Pilus Assembly Fimbrial Usher Protein; Outer Membrane Usher Protein FimD; Fimbriae-Related Protein

Number of amino acids: Translated: 840; Mature: 839

Protein sequence:

>840_residues
MATDIRTASLISASVAALCSVHPVRAEAFTSSSGVASDIAATDSQSDGGGSARSIPLNPTGRDIVLTVPAKDGATYLGDV
PLRIAADDTLSFPADRTLQLLEPILDPEVLKALRNGLGGRARIGPADLAPSGVVVVYDPQTLELRFQIPVERRASRSVAV
SPLDRSLFGEVVQPQNFSAYLNIRGSLDYVEGGFSQGFADPVLLLDGAARLGPVVAESDAIWIPGARGADFQRLGSRLVY
DDTHNLIRFTAGDLETTSRGFQTSPDIAGVSIFRSYSVLNPQQIIRPRGDRQFRLDRPSTVEVVVNGQQVRRLQLAPGNY
DLRDFPFTQGANDVRLNVLDDTGRTEVLRFNIFLDQTQLAKGLSEFGLYAGVKAPLGVRGPVYSNDWISSGFYRRGITDY
VTLGVNFQADKQTRMAGVEGVLATSIGIFGFNAAYSHADGIGDGRAVQATFQRQVQRGNGQSDTFNLFVESRSQKFAPVT
FFLPNNPYEFEVGGGYQRTFTNDFYAGVDARYSKGRGGRPDVQNYRVTGGWRISNSATLSAESRYQKDLRGDEFSAFLSL
TIRLGRYSSARVDHDTRDNRTRASFQTLHGSGVGSYNLSADAERSDFGSALNFNGNYFTNRAELGISHFGTFAGDFGTSL
NQRTSLRLGTSLSIAGDQASIGRPIYDSFAVVKPHKRLKGADVIVEPTSFGYTAKSGALGAATMPSLSSYAERTVTVDVA
NAPAGTDIGQGSFRVFPPYRSGFLLEVGSDYGVTAIGTMVDADGAPVSLVSGTATELAHPDRPPVTLFTNRQGRFGATGL
APGKWRLEMLDEKKSTFEINIPESTDGIIRLGQIAPAEGQ

Sequences:

>Translated_840_residues
MATDIRTASLISASVAALCSVHPVRAEAFTSSSGVASDIAATDSQSDGGGSARSIPLNPTGRDIVLTVPAKDGATYLGDV
PLRIAADDTLSFPADRTLQLLEPILDPEVLKALRNGLGGRARIGPADLAPSGVVVVYDPQTLELRFQIPVERRASRSVAV
SPLDRSLFGEVVQPQNFSAYLNIRGSLDYVEGGFSQGFADPVLLLDGAARLGPVVAESDAIWIPGARGADFQRLGSRLVY
DDTHNLIRFTAGDLETTSRGFQTSPDIAGVSIFRSYSVLNPQQIIRPRGDRQFRLDRPSTVEVVVNGQQVRRLQLAPGNY
DLRDFPFTQGANDVRLNVLDDTGRTEVLRFNIFLDQTQLAKGLSEFGLYAGVKAPLGVRGPVYSNDWISSGFYRRGITDY
VTLGVNFQADKQTRMAGVEGVLATSIGIFGFNAAYSHADGIGDGRAVQATFQRQVQRGNGQSDTFNLFVESRSQKFAPVT
FFLPNNPYEFEVGGGYQRTFTNDFYAGVDARYSKGRGGRPDVQNYRVTGGWRISNSATLSAESRYQKDLRGDEFSAFLSL
TIRLGRYSSARVDHDTRDNRTRASFQTLHGSGVGSYNLSADAERSDFGSALNFNGNYFTNRAELGISHFGTFAGDFGTSL
NQRTSLRLGTSLSIAGDQASIGRPIYDSFAVVKPHKRLKGADVIVEPTSFGYTAKSGALGAATMPSLSSYAERTVTVDVA
NAPAGTDIGQGSFRVFPPYRSGFLLEVGSDYGVTAIGTMVDADGAPVSLVSGTATELAHPDRPPVTLFTNRQGRFGATGL
APGKWRLEMLDEKKSTFEINIPESTDGIIRLGQIAPAEGQ
>Mature_839_residues
ATDIRTASLISASVAALCSVHPVRAEAFTSSSGVASDIAATDSQSDGGGSARSIPLNPTGRDIVLTVPAKDGATYLGDVP
LRIAADDTLSFPADRTLQLLEPILDPEVLKALRNGLGGRARIGPADLAPSGVVVVYDPQTLELRFQIPVERRASRSVAVS
PLDRSLFGEVVQPQNFSAYLNIRGSLDYVEGGFSQGFADPVLLLDGAARLGPVVAESDAIWIPGARGADFQRLGSRLVYD
DTHNLIRFTAGDLETTSRGFQTSPDIAGVSIFRSYSVLNPQQIIRPRGDRQFRLDRPSTVEVVVNGQQVRRLQLAPGNYD
LRDFPFTQGANDVRLNVLDDTGRTEVLRFNIFLDQTQLAKGLSEFGLYAGVKAPLGVRGPVYSNDWISSGFYRRGITDYV
TLGVNFQADKQTRMAGVEGVLATSIGIFGFNAAYSHADGIGDGRAVQATFQRQVQRGNGQSDTFNLFVESRSQKFAPVTF
FLPNNPYEFEVGGGYQRTFTNDFYAGVDARYSKGRGGRPDVQNYRVTGGWRISNSATLSAESRYQKDLRGDEFSAFLSLT
IRLGRYSSARVDHDTRDNRTRASFQTLHGSGVGSYNLSADAERSDFGSALNFNGNYFTNRAELGISHFGTFAGDFGTSLN
QRTSLRLGTSLSIAGDQASIGRPIYDSFAVVKPHKRLKGADVIVEPTSFGYTAKSGALGAATMPSLSSYAERTVTVDVAN
APAGTDIGQGSFRVFPPYRSGFLLEVGSDYGVTAIGTMVDADGAPVSLVSGTATELAHPDRPPVTLFTNRQGRFGATGLA
PGKWRLEMLDEKKSTFEINIPESTDGIIRLGQIAPAEGQ

Specific function: Unknown

COG id: COG3188

COG function: function code NU; P pilus assembly protein, porin PapC

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 90387; Mature: 90256

Theoretical pI: Translated: 6.55; Mature: 6.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.1 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
0.7 %Cys+Met (Translated Protein)
0.1 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
0.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATDIRTASLISASVAALCSVHPVRAEAFTSSSGVASDIAATDSQSDGGGSARSIPLNPT
CCCCCCHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCHHHHCCCCCCCCCCCEEECCCCCC
GRDIVLTVPAKDGATYLGDVPLRIAADDTLSFPADRTLQLLEPILDPEVLKALRNGLGGR
CCEEEEEEECCCCCEEECCCCEEEEECCCCCCCCCHHHHHHHHHCCHHHHHHHHHCCCCC
ARIGPADLAPSGVVVVYDPQTLELRFQIPVERRASRSVAVSPLDRSLFGEVVQPQNFSAY
CCCCCCCCCCCCEEEEECCCEEEEEEECCHHHCCCCCEEECCCCHHHHHHHCCCCCCEEE
LNIRGSLDYVEGGFSQGFADPVLLLDGAARLGPVVAESDAIWIPGARGADFQRLGSRLVY
EEEECCCCHHCCCCCCCCCCCEEEECCCHHHCCEEECCCEEECCCCCCCCHHHHCCEEEE
DDTHNLIRFTAGDLETTSRGFQTSPDIAGVSIFRSYSVLNPQQIIRPRGDRQFRLDRPST
ECCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHCCCCCHHHHHCCCCCCEEEECCCCE
VEVVVNGQQVRRLQLAPGNYDLRDFPFTQGANDVRLNVLDDTGRTEVLRFNIFLDQTQLA
EEEEECCCEEEEEEECCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEEEEEEECHHHHH
KGLSEFGLYAGVKAPLGVRGPVYSNDWISSGFYRRGITDYVTLGVNFQADKQTRMAGVEG
HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHCCCCEEEEEEEEECCCCHHHHHCCCH
VLATSIGIFGFNAAYSHADGIGDGRAVQATFQRQVQRGNGQSDTFNLFVESRSQKFAPVT
HHHHHEEEEECCCHHCCCCCCCCCCEEHHHHHHHHHHCCCCCCEEEEEEECCCCCCCEEE
FFLPNNPYEFEVGGGYQRTFTNDFYAGVDARYSKGRGGRPDVQNYRVTGGWRISNSATLS
EEECCCCEEEEECCCEEECCCCCHHCCCCCCCCCCCCCCCCCCCEEEECCEEECCCEEEC
AESRYQKDLRGDEFSAFLSLTIRLGRYSSARVDHDTRDNRTRASFQTLHGSGVGSYNLSA
HHHHHHHHCCCCHHHEEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCC
DAERSDFGSALNFNGNYFTNRAELGISHFGTFAGDFGTSLNQRTSLRLGTSLSIAGDQAS
CCCCHHCCCEEECCCCEECCHHHCCHHHHCCHHHHHCCCCCCCCEEEECCEEEECCCCCC
IGRPIYDSFAVVKPHKRLKGADVIVEPTSFGYTAKSGALGAATMPSLSSYAERTVTVDVA
CCCCCHHCEEEECCHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHCCEEEEEEEC
NAPAGTDIGQGSFRVFPPYRSGFLLEVGSDYGVTAIGTMVDADGAPVSLVSGTATELAHP
CCCCCCCCCCCCEEEECCCCCCEEEEECCCCCEEEEEEEEECCCCCEEEECCCHHHHCCC
DRPPVTLFTNRQGRFGATGLAPGKWRLEMLDEKKSTFEINIPESTDGIIRLGQIAPAEGQ
CCCCEEEEECCCCCCCCCCCCCCCEEEEEECCCCCEEEEECCCCCCCEEEECCCCCCCCC
>Mature Secondary Structure 
ATDIRTASLISASVAALCSVHPVRAEAFTSSSGVASDIAATDSQSDGGGSARSIPLNPT
CCCCCHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCHHHHCCCCCCCCCCCEEECCCCCC
GRDIVLTVPAKDGATYLGDVPLRIAADDTLSFPADRTLQLLEPILDPEVLKALRNGLGGR
CCEEEEEEECCCCCEEECCCCEEEEECCCCCCCCCHHHHHHHHHCCHHHHHHHHHCCCCC
ARIGPADLAPSGVVVVYDPQTLELRFQIPVERRASRSVAVSPLDRSLFGEVVQPQNFSAY
CCCCCCCCCCCCEEEEECCCEEEEEEECCHHHCCCCCEEECCCCHHHHHHHCCCCCCEEE
LNIRGSLDYVEGGFSQGFADPVLLLDGAARLGPVVAESDAIWIPGARGADFQRLGSRLVY
EEEECCCCHHCCCCCCCCCCCEEEECCCHHHCCEEECCCEEECCCCCCCCHHHHCCEEEE
DDTHNLIRFTAGDLETTSRGFQTSPDIAGVSIFRSYSVLNPQQIIRPRGDRQFRLDRPST
ECCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHCCCCCHHHHHCCCCCCEEEECCCCE
VEVVVNGQQVRRLQLAPGNYDLRDFPFTQGANDVRLNVLDDTGRTEVLRFNIFLDQTQLA
EEEEECCCEEEEEEECCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEEEEEEECHHHHH
KGLSEFGLYAGVKAPLGVRGPVYSNDWISSGFYRRGITDYVTLGVNFQADKQTRMAGVEG
HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHCCCCEEEEEEEEECCCCHHHHHCCCH
VLATSIGIFGFNAAYSHADGIGDGRAVQATFQRQVQRGNGQSDTFNLFVESRSQKFAPVT
HHHHHEEEEECCCHHCCCCCCCCCCEEHHHHHHHHHHCCCCCCEEEEEEECCCCCCCEEE
FFLPNNPYEFEVGGGYQRTFTNDFYAGVDARYSKGRGGRPDVQNYRVTGGWRISNSATLS
EEECCCCEEEEECCCEEECCCCCHHCCCCCCCCCCCCCCCCCCCEEEECCEEECCCEEEC
AESRYQKDLRGDEFSAFLSLTIRLGRYSSARVDHDTRDNRTRASFQTLHGSGVGSYNLSA
HHHHHHHHCCCCHHHEEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCC
DAERSDFGSALNFNGNYFTNRAELGISHFGTFAGDFGTSLNQRTSLRLGTSLSIAGDQAS
CCCCHHCCCEEECCCCEECCHHHCCHHHHCCHHHHHCCCCCCCCEEEECCEEEECCCCCC
IGRPIYDSFAVVKPHKRLKGADVIVEPTSFGYTAKSGALGAATMPSLSSYAERTVTVDVA
CCCCCHHCEEEECCHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHCCEEEEEEEC
NAPAGTDIGQGSFRVFPPYRSGFLLEVGSDYGVTAIGTMVDADGAPVSLVSGTATELAHP
CCCCCCCCCCCCEEEECCCCCCEEEEECCCCCEEEEEEEEECCCCCEEEECCCHHHHCCC
DRPPVTLFTNRQGRFGATGLAPGKWRLEMLDEKKSTFEINIPESTDGIIRLGQIAPAEGQ
CCCCEEEEECCCCCCCCCCCCCCCEEEEEECCCCCEEEEECCCCCCCEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA