| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is 87198749
Identifier: 87198749
GI number: 87198749
Start: 765335
End: 767341
Strand: Reverse
Name: 87198749
Synonym: Saro_0725
Alternate gene names: NA
Gene position: 767341-765335 (Counterclockwise)
Preceding gene: 87198750
Following gene: 87198748
Centisome position: 21.54
GC content: 64.67
Gene sequence:
>2007_bases ATGCATGACACAGCGTACCGCGTCGGCGGCCGGTTCCTCGAAAGCTACCTCGACCTGGCCGATTGCGACGTGCTCGAGAT CGGCGCCCTAATCGTGAATGGCACATTGCGCGACCATGCCCTTCCGACCACGCGGTGGGTCGGCATCGATCTCGTGCCAG GTCCAGGGGTGGACATCGTCGCGCAACCGGGAGAGGCCCTGCCCGTCCCCGACAGTGCGTTCGACGCGGTCGTGGCCAGT TCTGTCTTCGAGCACGATCCTGCATTCTGGGAAACGTTCCTGGAAATGGCCGACAAGGTCCGGCCAGGAGGCTACGTCTA CATCAACGCTCCCTCGAACGGCGGCATCCATCGCTACCCCCAGGACAACTGGCGCTTCTACCCGGATAGCGGTCGGGCGC TTGCCGCCTGGGCACAGCGCAAGGGCCGCGACATCAGCCTGGTCGAAAGCTTCGTGGCCGCGCGCGGACAGAAGGAGTGG AACGACTTCGTTGCCGTGTTCCGCCGGGGACAACCGGCCCCCGACCACGCCATGCGCCTGCTTCACACGCAGGTCGACTG CGTGAACGTCTCGACGTGGAGCGAACCGGGGCTGGTCCGCCCCGTGGCGATCACCGAAGACATGCAGCTCCTCGACGAAG CCCGAAGCGAATGCGCTCACGCCAAGTCCGCCGCAAGCGAAAGCGATGCGAGGGCTGCCTTGGCAATCGGTGGACTGGAA GCCAAGGTAGCGCAGATCGAAGCGCAGTTTCGCGCTGCCGAAAAGAGCCGCGCTAGCGCGGAAACATTGTTGAGCGCCGA ACGGGCAGAGCGCAGGGCCCTGGCTGCCGCGGTCGAGACCGCGCAAGCCGAAAAGGCGTTGCTACGTGAACAGCTGGCGA AGAGTGCGGAAGAACAGGCCGAGATTGAGGGCAACCTCGCTTGCATCAGGGCAGAACTGGGCAACACGGAACACGAACTT TCCGCAACGCGAAGTACGCTGCGCCAGCGGGAAGAAGAACTCTCGCAACTCCTGGCAGAGCTGCAGCGTTCGCTGGCCGA GCGAGACTGCCTTCTCGATCGGCTTGCGAAAATGGATACGGCGGCCCGAAGGATGGAAGAGAAGCTCTCGGAGGCCGAAG GCTGGGTGTTCCGGCTGGCGGCCGAGAGGACCGCACGGGAGCGGGAAATGGCCGTGGCGGAACGTGCGCTGCGACGGGAA CGCAAGGAACGGGCACGGGCGGACTGGTTATGGACAACCCTGGCGCACGACGCGCAGCGCCTGTCCGAACGTCTCGTCGA GGTGGAAGACAGTTCCCGGCAGGCACAGGCCCGGCTGGAGCAGGCCCTGGCCGATGCGACGACCGCGCTCACCCATCTCA AGGAAGAACGCGCCGCTCAGTTGCGATCAGCGCAGGGCAAGACGGAGGCCGAGCGCGAAGCGCGCCTGTCACTTGCTCGC CAACTGGAGGAAGAAGTGCACCGCAGGCAACGCGAACTGACCCTGCAACAAGCAGAATTGTCCAAGGAAAGAGAAACGCG GCGCGCCGCAGAGGCAACTATCCGGGAAACCGAGGCCCAGCTTTCGACCGTTCGGCAGTCGCTGGCGAAGGTGCGCGAGG ACGCTCTTGCGGAGACAAGCCGCATCAAGGGTGAGCAGGCGACGGCCGCCCGGATCCTTGCCGCTCGAAGCGAGGAGATC GTCGCGCTGACCAAGCTTCTTGCCAACGCTGAACGGCCTGCCGCACCGCCACCGCAATTGCCGACAGTGGCAACGATGCT GGCCGAAGTGGTCGGAGAAGCCCTGATGGCGACCCAGCCTCGTATCGGACTGCCTTTCGTTCGCCGGAACGTCAGCTCCC GGCTGCGCACGACCTTGCGCCAGAAGGGCTTGTTCGACGCAGAGGCTTATCTCCGCGCCAATCCCGATGTCGCAGCGGCC GGGCAGGATGCGCTGCATCACTACCTGATACATGGTCTGAAGGAAGGACGCCTGTTCGGCTCGAGCGCAACGGGAGACGG ACATTGA
Upstream 100 bases:
>100_bases GATGGACCGAACAGCCTCGCGCTCGCCGATGTGGGACCGCTGATGCGCGTCCTCGTCGAAATCGACGCCGCCAGACGGGC TGAGCGCAAGGAATTGACCG
Downstream 100 bases:
>100_bases CGGAAGCGGCGTCACCTCTCGATCAGGGGCTTTTGGCCATGGATCAGGCGCACGCGAATGCCGCCAGTCTGGAAGCCAGC GATCTGTTCGACGCCGATTG
Product: chromosome segregation ATPases-like
Products: NA
Alternate protein names: SAM-Dependent Methyltransferase; Methyltransferase Domain Family Protein; Chromosome Segregation ATPases-Like
Number of amino acids: Translated: 668; Mature: 668
Protein sequence:
>668_residues MHDTAYRVGGRFLESYLDLADCDVLEIGALIVNGTLRDHALPTTRWVGIDLVPGPGVDIVAQPGEALPVPDSAFDAVVAS SVFEHDPAFWETFLEMADKVRPGGYVYINAPSNGGIHRYPQDNWRFYPDSGRALAAWAQRKGRDISLVESFVAARGQKEW NDFVAVFRRGQPAPDHAMRLLHTQVDCVNVSTWSEPGLVRPVAITEDMQLLDEARSECAHAKSAASESDARAALAIGGLE AKVAQIEAQFRAAEKSRASAETLLSAERAERRALAAAVETAQAEKALLREQLAKSAEEQAEIEGNLACIRAELGNTEHEL SATRSTLRQREEELSQLLAELQRSLAERDCLLDRLAKMDTAARRMEEKLSEAEGWVFRLAAERTAREREMAVAERALRRE RKERARADWLWTTLAHDAQRLSERLVEVEDSSRQAQARLEQALADATTALTHLKEERAAQLRSAQGKTEAEREARLSLAR QLEEEVHRRQRELTLQQAELSKERETRRAAEATIRETEAQLSTVRQSLAKVREDALAETSRIKGEQATAARILAARSEEI VALTKLLANAERPAAPPPQLPTVATMLAEVVGEALMATQPRIGLPFVRRNVSSRLRTTLRQKGLFDAEAYLRANPDVAAA GQDALHHYLIHGLKEGRLFGSSATGDGH
Sequences:
>Translated_668_residues MHDTAYRVGGRFLESYLDLADCDVLEIGALIVNGTLRDHALPTTRWVGIDLVPGPGVDIVAQPGEALPVPDSAFDAVVAS SVFEHDPAFWETFLEMADKVRPGGYVYINAPSNGGIHRYPQDNWRFYPDSGRALAAWAQRKGRDISLVESFVAARGQKEW NDFVAVFRRGQPAPDHAMRLLHTQVDCVNVSTWSEPGLVRPVAITEDMQLLDEARSECAHAKSAASESDARAALAIGGLE AKVAQIEAQFRAAEKSRASAETLLSAERAERRALAAAVETAQAEKALLREQLAKSAEEQAEIEGNLACIRAELGNTEHEL SATRSTLRQREEELSQLLAELQRSLAERDCLLDRLAKMDTAARRMEEKLSEAEGWVFRLAAERTAREREMAVAERALRRE RKERARADWLWTTLAHDAQRLSERLVEVEDSSRQAQARLEQALADATTALTHLKEERAAQLRSAQGKTEAEREARLSLAR QLEEEVHRRQRELTLQQAELSKERETRRAAEATIRETEAQLSTVRQSLAKVREDALAETSRIKGEQATAARILAARSEEI VALTKLLANAERPAAPPPQLPTVATMLAEVVGEALMATQPRIGLPFVRRNVSSRLRTTLRQKGLFDAEAYLRANPDVAAA GQDALHHYLIHGLKEGRLFGSSATGDGH >Mature_668_residues MHDTAYRVGGRFLESYLDLADCDVLEIGALIVNGTLRDHALPTTRWVGIDLVPGPGVDIVAQPGEALPVPDSAFDAVVAS SVFEHDPAFWETFLEMADKVRPGGYVYINAPSNGGIHRYPQDNWRFYPDSGRALAAWAQRKGRDISLVESFVAARGQKEW NDFVAVFRRGQPAPDHAMRLLHTQVDCVNVSTWSEPGLVRPVAITEDMQLLDEARSECAHAKSAASESDARAALAIGGLE AKVAQIEAQFRAAEKSRASAETLLSAERAERRALAAAVETAQAEKALLREQLAKSAEEQAEIEGNLACIRAELGNTEHEL SATRSTLRQREEELSQLLAELQRSLAERDCLLDRLAKMDTAARRMEEKLSEAEGWVFRLAAERTAREREMAVAERALRRE RKERARADWLWTTLAHDAQRLSERLVEVEDSSRQAQARLEQALADATTALTHLKEERAAQLRSAQGKTEAEREARLSLAR QLEEEVHRRQRELTLQQAELSKERETRRAAEATIRETEAQLSTVRQSLAKVREDALAETSRIKGEQATAARILAARSEEI VALTKLLANAERPAAPPPQLPTVATMLAEVVGEALMATQPRIGLPFVRRNVSSRLRTTLRQKGLFDAEAYLRANPDVAAA GQDALHHYLIHGLKEGRLFGSSATGDGH
Specific function: Unknown
COG id: COG0500
COG function: function code QR; SAM-dependent methyltransferases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 73903; Mature: 73903
Theoretical pI: Translated: 5.84; Mature: 5.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHDTAYRVGGRFLESYLDLADCDVLEIGALIVNGTLRDHALPTTRWVGIDLVPGPGVDIV CCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHEECCHHHCCCCCCEEEEEEECCCCCCCEE AQPGEALPVPDSAFDAVVASSVFEHDPAFWETFLEMADKVRPGGYVYINAPSNGGIHRYP ECCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCC QDNWRFYPDSGRALAAWAQRKGRDISLVESFVAARGQKEWNDFVAVFRRGQPAPDHAMRL CCCCEEECCCCCHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHH LHTQVDCVNVSTWSEPGLVRPVAITEDMQLLDEARSECAHAKSAASESDARAALAIGGLE HHHHHCEEECCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHCCCHHCHHHHHCCCHH AKVAQIEAQFRAAEKSRASAETLLSAERAERRALAAAVETAQAEKALLREQLAKSAEEQA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EIEGNLACIRAELGNTEHELSATRSTLRQREEELSQLLAELQRSLAERDCLLDRLAKMDT HHCCCCEEEEEHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AARRMEEKLSEAEGWVFRLAAERTAREREMAVAERALRRERKERARADWLWTTLAHDAQR HHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LSERLVEVEDSSRQAQARLEQALADATTALTHLKEERAAQLRSAQGKTEAEREARLSLAR HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH QLEEEVHRRQRELTLQQAELSKERETRRAAEATIRETEAQLSTVRQSLAKVREDALAETS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RIKGEQATAARILAARSEEIVALTKLLANAERPAAPPPQLPTVATMLAEVVGEALMATQP HCCCCHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCC RIGLPFVRRNVSSRLRTTLRQKGLFDAEAYLRANPDVAAAGQDALHHYLIHGLKEGRLFG CCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCEEC SSATGDGH CCCCCCCC >Mature Secondary Structure MHDTAYRVGGRFLESYLDLADCDVLEIGALIVNGTLRDHALPTTRWVGIDLVPGPGVDIV CCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHEECCHHHCCCCCCEEEEEEECCCCCCCEE AQPGEALPVPDSAFDAVVASSVFEHDPAFWETFLEMADKVRPGGYVYINAPSNGGIHRYP ECCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCC QDNWRFYPDSGRALAAWAQRKGRDISLVESFVAARGQKEWNDFVAVFRRGQPAPDHAMRL CCCCEEECCCCCHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHH LHTQVDCVNVSTWSEPGLVRPVAITEDMQLLDEARSECAHAKSAASESDARAALAIGGLE HHHHHCEEECCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHCCCHHCHHHHHCCCHH AKVAQIEAQFRAAEKSRASAETLLSAERAERRALAAAVETAQAEKALLREQLAKSAEEQA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EIEGNLACIRAELGNTEHELSATRSTLRQREEELSQLLAELQRSLAERDCLLDRLAKMDT HHCCCCEEEEEHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AARRMEEKLSEAEGWVFRLAAERTAREREMAVAERALRRERKERARADWLWTTLAHDAQR HHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LSERLVEVEDSSRQAQARLEQALADATTALTHLKEERAAQLRSAQGKTEAEREARLSLAR HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH QLEEEVHRRQRELTLQQAELSKERETRRAAEATIRETEAQLSTVRQSLAKVREDALAETS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RIKGEQATAARILAARSEEIVALTKLLANAERPAAPPPQLPTVATMLAEVVGEALMATQP HCCCCHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCC RIGLPFVRRNVSSRLRTTLRQKGLFDAEAYLRANPDVAAAGQDALHHYLIHGLKEGRLFG CCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCEEC SSATGDGH CCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA