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The map label for this gene is ctrC [H]

Identifier: 87198745

GI number: 87198745

Start: 760546

End: 761343

Strand: Reverse

Name: ctrC [H]

Synonym: Saro_0721

Alternate gene names: 87198745

Gene position: 761343-760546 (Counterclockwise)

Preceding gene: 87198746

Following gene: 87198744

Centisome position: 21.38

GC content: 62.03

Gene sequence:

>798_bases
ATGCCCAGCCTCGACACTCCAAGCCTGTCTGCCGGTTGGAAGATCCAGATCCGCGTCATCAAGGCCCTCCTGATCAGAGA
GCTTACGACACGGTTCGGCCGCGAAAACATCGGATTCCTATGGATGATGGCCGAGCCCGCCCTGTTTGCCGTGCTGGTCG
CGCTGCTGTGGCGCTTTGTGCGAGGTCCGGAAGAGCACGGTATCGGGATCATCGCGTTCACGGTCAGCGGGTACATACCG
CTCGTGCTGTTCCGCCATGCGGTGAACCGAGCGACGGGGGTGCTGAGCGCCAATCACGGCCTGCTGTACCATCGGCAAGT
CAAAATCCTCGACCTTGTGCTGGCCCGCTTTCTCATCGAACTGGTCGGCGCGATGATGGCTTACGTGTTGGTTGCCACAG
TGCTGTTCCTGGCAGGGCTGTTCCCGATGCCGCACGACCTCGGACTGTTCATGCTGGGATGGGGCTACTGGTCATTTATC
AGCTTTGCCGTAGCCTTGGTGATCGCGCCGCTGAGCCAGATGCATGAACTGGTGGAGAAGCTGATTCCCGTCACGACCTA
CGTGATGGTACCGCTTTCGGGGGCTTTCCACCTCATGGCCTGGCTCACGCCCGGTGCGCGCGTCTGGCTGGCGTGGTCGC
CGCTCGTCCATGGCATGGAAATGATGCGCTTCGGAATGTTCGGTCATCTGGTGTGGCCGCACTACAGTCCCGGCTACCCG
CTGGCCGGGGCGATCGGGCTGACCTGCCTCGGGCTGGCTCTCTCACGCCGCGTACGCAGGACCATGGCGGTCGAATGA

Upstream 100 bases:

>100_bases
CTGAAATCCACGCTGACGATTGCCGCTGGCATCCTTTGTCTCTGGTTCATCGGTTGGATGTTCGTCGTAGGCATTCTCGA
ACACGCTCCGGAGGACTGAC

Downstream 100 bases:

>100_bases
TCACCTGCCAGATGATCCACAAGACGTACGCCGCCGGGCACGGAGAACGCAAGGTCCTGCGCGGGCTCGATTTCGCCATC
TCGAGAGGCGAGCATGTGGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 265; Mature: 264

Protein sequence:

>265_residues
MPSLDTPSLSAGWKIQIRVIKALLIRELTTRFGRENIGFLWMMAEPALFAVLVALLWRFVRGPEEHGIGIIAFTVSGYIP
LVLFRHAVNRATGVLSANHGLLYHRQVKILDLVLARFLIELVGAMMAYVLVATVLFLAGLFPMPHDLGLFMLGWGYWSFI
SFAVALVIAPLSQMHELVEKLIPVTTYVMVPLSGAFHLMAWLTPGARVWLAWSPLVHGMEMMRFGMFGHLVWPHYSPGYP
LAGAIGLTCLGLALSRRVRRTMAVE

Sequences:

>Translated_265_residues
MPSLDTPSLSAGWKIQIRVIKALLIRELTTRFGRENIGFLWMMAEPALFAVLVALLWRFVRGPEEHGIGIIAFTVSGYIP
LVLFRHAVNRATGVLSANHGLLYHRQVKILDLVLARFLIELVGAMMAYVLVATVLFLAGLFPMPHDLGLFMLGWGYWSFI
SFAVALVIAPLSQMHELVEKLIPVTTYVMVPLSGAFHLMAWLTPGARVWLAWSPLVHGMEMMRFGMFGHLVWPHYSPGYP
LAGAIGLTCLGLALSRRVRRTMAVE
>Mature_264_residues
PSLDTPSLSAGWKIQIRVIKALLIRELTTRFGRENIGFLWMMAEPALFAVLVALLWRFVRGPEEHGIGIIAFTVSGYIPL
VLFRHAVNRATGVLSANHGLLYHRQVKILDLVLARFLIELVGAMMAYVLVATVLFLAGLFPMPHDLGLFMLGWGYWSFIS
FAVALVIAPLSQMHELVEKLIPVTTYVMVPLSGAFHLMAWLTPGARVWLAWSPLVHGMEMMRFGMFGHLVWPHYSPGYPL
AGAIGLTCLGLALSRRVRRTMAVE

Specific function: May form an ATP-driven capsule polysaccharide export apparatus, in association with the CtrB and CtrD proteins [H]

COG id: COG1682

COG function: function code GM; ABC-type polysaccharide/polyol phosphate export systems, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-2 domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000412
- InterPro:   IPR013526
- InterPro:   IPR013525 [H]

Pfam domain/function: PF01061 ABC2_membrane [H]

EC number: NA

Molecular weight: Translated: 29564; Mature: 29433

Theoretical pI: Translated: 10.25; Mature: 10.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
5.7 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
5.3 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
PSLDTPSLSAGWKIQIRVIKALLIRELTTRFGRENIGFLWMMAEPALFAVLVALLWRFV
CCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHHH
RGPEEHGIGIIAFTVSGYIPLVLFRHAVNRATGVLSANHGLLYHRQVKILDLVLARFLIE
CCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHEECCCCEEEHHHHHHHHHHHHHHHHH
LVGAMMAYVLVATVLFLAGLFPMPHDLGLFMLGWGYWSFISFAVALVIAPLSQMHELVEK
HHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LIPVTTYVMVPLSGAFHLMAWLTPGARVWLAWSPLVHGMEMMRFGMFGHLVWPHYSPGYP
HHHHHHHHHHHCCHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
LAGAIGLTCLGLALSRRVRRTMAVE
HHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1659649; 10710307 [H]