| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is 87198658
Identifier: 87198658
GI number: 87198658
Start: 675882
End: 676229
Strand: Reverse
Name: 87198658
Synonym: Saro_0634
Alternate gene names: NA
Gene position: 676229-675882 (Counterclockwise)
Preceding gene: 87198659
Following gene: 87198657
Centisome position: 18.99
GC content: 60.63
Gene sequence:
>348_bases TTGATTGCTCCAGAGCTGTTGCAAGGCTCTCCACGGATCGGCGCATCGACTGCATGCAAGCGCCGCAGACGCTCATCGTT AGGGCCGCCATTAGGCCGCGCCCCGCTCGGACAAGTCGTTGATTTGTCCGGTGGCGGATTGGTCCGATGGAGCAGTATCA ACACCGGTATGTTCACCGTCCCCGCGATACTCATCCATGAACCTGCGCACACGCTCGACCGTGCTCATCCTCACGTCGCG TCCAGCGCGCAGCTGTCGGACGAAATGACGATCGCCAAGTGCTTGTTGCCCCAAAGCGGTCGCGCTCAGCGCGTGTCGCT CGAGGAACTGCTCAATGTCATCCAGTAG
Upstream 100 bases:
>100_bases CCGACGAGAGCTTCGCCAAAACTCGGCAAGACATCGAAGCGGCCACCCAAAGTCTTGCAAAGCAGCTGGGGAAAGCTCTC GGCAAGGGCTTCAAGCCGCG
Downstream 100 bases:
>100_bases CGTCATGCCGACACTCTTAAAGTGTGACATTGCACACCGTCAAGGTGTGAAACTTCCCGACTGCTGGGTTACCCCCCGAA TGTGTGATACTTCACACATG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 115; Mature: 115
Protein sequence:
>115_residues MIAPELLQGSPRIGASTACKRRRRSSLGPPLGRAPLGQVVDLSGGGLVRWSSINTGMFTVPAILIHEPAHTLDRAHPHVA SSAQLSDEMTIAKCLLPQSGRAQRVSLEELLNVIQ
Sequences:
>Translated_115_residues MIAPELLQGSPRIGASTACKRRRRSSLGPPLGRAPLGQVVDLSGGGLVRWSSINTGMFTVPAILIHEPAHTLDRAHPHVA SSAQLSDEMTIAKCLLPQSGRAQRVSLEELLNVIQ >Mature_115_residues MIAPELLQGSPRIGASTACKRRRRSSLGPPLGRAPLGQVVDLSGGGLVRWSSINTGMFTVPAILIHEPAHTLDRAHPHVA SSAQLSDEMTIAKCLLPQSGRAQRVSLEELLNVIQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12266; Mature: 12266
Theoretical pI: Translated: 10.69; Mature: 10.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIAPELLQGSPRIGASTACKRRRRSSLGPPLGRAPLGQVVDLSGGGLVRWSSINTGMFTV CCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCEEECCCCCEEEECCCCCCHHHH PAILIHEPAHTLDRAHPHVASSAQLSDEMTIAKCLLPQSGRAQRVSLEELLNVIQ HHHHHCCCHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCCCEECHHHHHHHHC >Mature Secondary Structure MIAPELLQGSPRIGASTACKRRRRSSLGPPLGRAPLGQVVDLSGGGLVRWSSINTGMFTV CCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCEEECCCCCEEEECCCCCCHHHH PAILIHEPAHTLDRAHPHVASSAQLSDEMTIAKCLLPQSGRAQRVSLEELLNVIQ HHHHHCCCHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCCCEECHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA