| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is 87198652
Identifier: 87198652
GI number: 87198652
Start: 672976
End: 673221
Strand: Reverse
Name: 87198652
Synonym: Saro_0628
Alternate gene names: NA
Gene position: 673221-672976 (Counterclockwise)
Preceding gene: 87198653
Following gene: 87198651
Centisome position: 18.9
GC content: 65.04
Gene sequence:
>246_bases GTGATGCTGGACTCACCCTCCTTTGGCACAGCGCGTTCAACTCTGGACGCTGTTGCCCACACTCGGGAGCCGGCCCTTCG GGTCGCGTCGGCAGAGCCGGCTCCCGTCCTTTGTGAGACCCACGGCATCACTGATCGCGATCGCCGCGACTTTCGCATCC TTCTTCTCGCCATGCCGGCGCTGGCCGCCATCGCGGCTTCATTGTCCGCGATCTGCGCGGCTGTGATTTCCGGACAGCCC GCATGA
Upstream 100 bases:
>100_bases CTTCCGGCATTCAGCGGATTGCCTTGCACCTTCGCCACGATATCAATGGCGTCCACGTGCCGCCTTATCCCGGCTTCGCG CCGCCCGAGAAGGCAGCCGC
Downstream 100 bases:
>100_bases TCTACCCGGCCGATCCCCCGCCGCCCGGTTGGGCGCACAGCCTGCGCCAGCTCGCTCTTCCGCTGCTCGCCCTCGTCTTG GGCGTAGCGATGTTCGTCCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 81; Mature: 81
Protein sequence:
>81_residues MMLDSPSFGTARSTLDAVAHTREPALRVASAEPAPVLCETHGITDRDRRDFRILLLAMPALAAIAASLSAICAAVISGQP A
Sequences:
>Translated_81_residues MMLDSPSFGTARSTLDAVAHTREPALRVASAEPAPVLCETHGITDRDRRDFRILLLAMPALAAIAASLSAICAAVISGQP A >Mature_81_residues MMLDSPSFGTARSTLDAVAHTREPALRVASAEPAPVLCETHGITDRDRRDFRILLLAMPALAAIAASLSAICAAVISGQP A
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8429; Mature: 8429
Theoretical pI: Translated: 6.50; Mature: 6.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMLDSPSFGTARSTLDAVAHTREPALRVASAEPAPVLCETHGITDRDRRDFRILLLAMPA CCCCCCCCCCHHHHHHHHHHCCCCCEEECCCCCCCEEEECCCCCCCCCCHHHHHHHHHHH LAAIAASLSAICAAVISGQPA HHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MMLDSPSFGTARSTLDAVAHTREPALRVASAEPAPVLCETHGITDRDRRDFRILLLAMPA CCCCCCCCCCHHHHHHHHHHCCCCCEEECCCCCCCEEEECCCCCCCCCCHHHHHHHHHHH LAAIAASLSAICAAVISGQPA HHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA