| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is 87198645
Identifier: 87198645
GI number: 87198645
Start: 667779
End: 668300
Strand: Reverse
Name: 87198645
Synonym: Saro_0621
Alternate gene names: NA
Gene position: 668300-667779 (Counterclockwise)
Preceding gene: 87198646
Following gene: 87198644
Centisome position: 18.76
GC content: 59.2
Gene sequence:
>522_bases ATGACCGCAGACGACATCCTTGCAGCGCTGATCAAGCGCGCTGGTGACGACATATTCGCCACTGAGCTGTCCATGTCCGG CCGCGATCGGCGTTGCGATTTCTGGACTATCAGCGCCAACGGGTCGGCCGGGTTCCATGCGATTGCGTACGAGATCAAGG TTTCTCGGCAGGACTTCATGCGCGACCATGCTGTGAAGCAGCGCGAAGCACGTCTCTATTCCGATCGGTTCTTCTACGTC ACGCCGGCTGCACTCGTGCGCAAGGACGAAGTACCGGACTGGGCGGGACTGATCGAACTAGATGGCGACAAGCTGCGGAC GATCGTGCCTGCTCCGATCCGTGACAAGGATGCGCCAAGTTGGCAGTTCGTCGTTTCGCTGATCCGAAACTCAGGCCAGC TCCATCGCGACCAGGACACTCTCAAGAAGCGGATGCTCAATGCTGAGAGGCAGGTTCGTGATGCGACCAAGCTGCTGCGC GAAGCAGGGCTCGAGCCTTGGAAGTTCGGGATCTTCGGTTGA
Upstream 100 bases:
>100_bases GCCTGCACGGCGAGTCCGGCACCAGGTGGGCCGACAACCCGTGGGTCACCGTCTACACCTTTGATGTGCACAAGGGAAAC ATCGGCAAGGCAGCGCGCGG
Downstream 100 bases:
>100_bases TGGATACCCCCTTTGCCTCTCTCGCCGGCAAGCGCTTCCAGCTGCTCTACGCTGACCCGGCATGGCAAACCGTGCTCTGG TCCGGCGCACAGCGTACGCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 173; Mature: 172
Protein sequence:
>173_residues MTADDILAALIKRAGDDIFATELSMSGRDRRCDFWTISANGSAGFHAIAYEIKVSRQDFMRDHAVKQREARLYSDRFFYV TPAALVRKDEVPDWAGLIELDGDKLRTIVPAPIRDKDAPSWQFVVSLIRNSGQLHRDQDTLKKRMLNAERQVRDATKLLR EAGLEPWKFGIFG
Sequences:
>Translated_173_residues MTADDILAALIKRAGDDIFATELSMSGRDRRCDFWTISANGSAGFHAIAYEIKVSRQDFMRDHAVKQREARLYSDRFFYV TPAALVRKDEVPDWAGLIELDGDKLRTIVPAPIRDKDAPSWQFVVSLIRNSGQLHRDQDTLKKRMLNAERQVRDATKLLR EAGLEPWKFGIFG >Mature_172_residues TADDILAALIKRAGDDIFATELSMSGRDRRCDFWTISANGSAGFHAIAYEIKVSRQDFMRDHAVKQREARLYSDRFFYVT PAALVRKDEVPDWAGLIELDGDKLRTIVPAPIRDKDAPSWQFVVSLIRNSGQLHRDQDTLKKRMLNAERQVRDATKLLRE AGLEPWKFGIFG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19755; Mature: 19624
Theoretical pI: Translated: 9.09; Mature: 9.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTADDILAALIKRAGDDIFATELSMSGRDRRCDFWTISANGSAGFHAIAYEIKVSRQDFM CCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCEEEEECCCCCCEEEEEEEEEECHHHHH RDHAVKQREARLYSDRFFYVTPAALVRKDEVPDWAGLIELDGDKLRTIVPAPIRDKDAPS HHHHHHHHHHHHHCCCEEEECHHHHHHCCCCCCCCCEEEECCCCEEEECCCCCCCCCCCH WQFVVSLIRNSGQLHRDQDTLKKRMLNAERQVRDATKLLREAGLEPWKFGIFG HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure TADDILAALIKRAGDDIFATELSMSGRDRRCDFWTISANGSAGFHAIAYEIKVSRQDFM CHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCEEEEECCCCCCEEEEEEEEEECHHHHH RDHAVKQREARLYSDRFFYVTPAALVRKDEVPDWAGLIELDGDKLRTIVPAPIRDKDAPS HHHHHHHHHHHHHCCCEEEECHHHHHHCCCCCCCCCEEEECCCCEEEECCCCCCCCCCCH WQFVVSLIRNSGQLHRDQDTLKKRMLNAERQVRDATKLLREAGLEPWKFGIFG HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA