Definition Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome.
Accession NC_007794
Length 3,561,584

Click here to switch to the map view.

The map label for this gene is 87198588

Identifier: 87198588

GI number: 87198588

Start: 612277

End: 612960

Strand: Reverse

Name: 87198588

Synonym: Saro_0564

Alternate gene names: NA

Gene position: 612960-612277 (Counterclockwise)

Preceding gene: 87198589

Following gene: 87198586

Centisome position: 17.21

GC content: 68.42

Gene sequence:

>684_bases
GTGAGCTACGTCCTCGTCACGGCGAACCGCAATTATTCGAGCTGGTCGCTGCGCCCGTGGGTGCTGATGAAGGCGCTCGG
CATTCCTTTCGAGGACCGCGTCGAGCCCTTCACCCGGCCGGTCAACTACGACGAGTTCCGCGCCTTCTCGCCGACCGGCC
AGGTACCAGTGCTGATCGACGGGACGCGCACGGTGTGGGACTCGCTCGGCATTGCGCTCTACCTGGCCGAACGCCACGGC
GGGGTCTGGCCGCAGGACGAGGAGGCGCGGGCCTTTGCGTTCTGCGCGGTGGCCGAGATGCACGGCGGCTTTTCGGCGCT
GCGCAACGACTGCACGATGAACGTCGGCGTGCGGGTGAAGCCGCGCCCGATGCGGCCGGCGCTGGTGCGCGACATTGCCC
GCGTGCGCGAGATCTTCGAGGAAGGACTAGCCCGGTTCGGCGGCCCCTGGCTGGCGGGCGACAACTTTACCGCGCTCGAC
GCCTTCTTCGCCCCGGTCGCCTTCCGCATTCGCACCTACGGACTTGACGTCGGCAAGGGACAGGCATGGGTCGACCGCGT
CCTCGCCCACCCCGCCATGCTGCAATGGGAGGCCGAGGCGCTGGAAGAAAGCTGGCGCGAGGAAGGCCACGAGGCCGAAC
TGGCGGAATGCGGCGAGATCGTCGCCGACTTCCGCAAGCGCTGA

Upstream 100 bases:

>100_bases
GGACGCGACGGCGAGGTCGCGGCGCGCTTTGCCCCCGGCGTCACCCCTGACGACCCCGCGCTGCTGGCAGCGATCGACGC
CGAACTGGCAAAGTGACCGC

Downstream 100 bases:

>100_bases
TCAGCTCTCGGAAGGGCCCGGACCGTTCGCGCCATCCTTTTCGCGGGCGTTGAGCTTGGCCCACAGGTTCTCGGTCCCGG
CCTCGACCGCCTTGTTCACG

Product: glutathione S-transferase-like protein

Products: NA

Alternate protein names: Glutathione S-Transferase Domain-Containing Protein; Glutathione S-Transferase Domain Protein; Glutathione S-Transferase Family Protein; Glutathione S-Transferase-Like Protein; Glutathione S-Transferase-Like; Glutathione-S-Transferase Protein; Glutathione S-Transferase Protein; Glutathione S-Transferase N-Terminal Domain Protein; Glutathione S-Transferase Domain; Glutathione S-Transferase N-Terminal Domain-Containing; Maleylacetoacetate Isomerase; Stringent Starvation Protein A; GSH-Dependent Dehydroascorbate Reductase; Glutathione S-Transferase N-Terminal; Glutathione-S-Tranferase Family Protein

Number of amino acids: Translated: 227; Mature: 226

Protein sequence:

>227_residues
MSYVLVTANRNYSSWSLRPWVLMKALGIPFEDRVEPFTRPVNYDEFRAFSPTGQVPVLIDGTRTVWDSLGIALYLAERHG
GVWPQDEEARAFAFCAVAEMHGGFSALRNDCTMNVGVRVKPRPMRPALVRDIARVREIFEEGLARFGGPWLAGDNFTALD
AFFAPVAFRIRTYGLDVGKGQAWVDRVLAHPAMLQWEAEALEESWREEGHEAELAECGEIVADFRKR

Sequences:

>Translated_227_residues
MSYVLVTANRNYSSWSLRPWVLMKALGIPFEDRVEPFTRPVNYDEFRAFSPTGQVPVLIDGTRTVWDSLGIALYLAERHG
GVWPQDEEARAFAFCAVAEMHGGFSALRNDCTMNVGVRVKPRPMRPALVRDIARVREIFEEGLARFGGPWLAGDNFTALD
AFFAPVAFRIRTYGLDVGKGQAWVDRVLAHPAMLQWEAEALEESWREEGHEAELAECGEIVADFRKR
>Mature_226_residues
SYVLVTANRNYSSWSLRPWVLMKALGIPFEDRVEPFTRPVNYDEFRAFSPTGQVPVLIDGTRTVWDSLGIALYLAERHGG
VWPQDEEARAFAFCAVAEMHGGFSALRNDCTMNVGVRVKPRPMRPALVRDIARVREIFEEGLARFGGPWLAGDNFTALDA
FFAPVAFRIRTYGLDVGKGQAWVDRVLAHPAMLQWEAEALEESWREEGHEAELAECGEIVADFRKR

Specific function: Unknown

COG id: COG0625

COG function: function code O; Glutathione S-transferase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25664; Mature: 25533

Theoretical pI: Translated: 5.18; Mature: 5.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSYVLVTANRNYSSWSLRPWVLMKALGIPFEDRVEPFTRPVNYDEFRAFSPTGQVPVLID
CCEEEEEECCCCCCCCCCHHHHHHHHCCCCHHHCCHHHCCCCHHHHEEECCCCCEEEEEC
GTRTVWDSLGIALYLAERHGGVWPQDEEARAFAFCAVAEMHGGFSALRNDCTMNVGVRVK
CCHHHHHHCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHCCCEECCCEEEC
PRPMRPALVRDIARVREIFEEGLARFGGPWLAGDNFTALDAFFAPVAFRIRTYGLDVGKG
CCCCCHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCHHHHHHHHHHHHHHHEECCCCCCC
QAWVDRVLAHPAMLQWEAEALEESWREEGHEAELAECGEIVADFRKR
HHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SYVLVTANRNYSSWSLRPWVLMKALGIPFEDRVEPFTRPVNYDEFRAFSPTGQVPVLID
CEEEEEECCCCCCCCCCHHHHHHHHCCCCHHHCCHHHCCCCHHHHEEECCCCCEEEEEC
GTRTVWDSLGIALYLAERHGGVWPQDEEARAFAFCAVAEMHGGFSALRNDCTMNVGVRVK
CCHHHHHHCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHCCCEECCCEEEC
PRPMRPALVRDIARVREIFEEGLARFGGPWLAGDNFTALDAFFAPVAFRIRTYGLDVGKG
CCCCCHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCHHHHHHHHHHHHHHHEECCCCCCC
QAWVDRVLAHPAMLQWEAEALEESWREEGHEAELAECGEIVADFRKR
HHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA