| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is 87198588
Identifier: 87198588
GI number: 87198588
Start: 612277
End: 612960
Strand: Reverse
Name: 87198588
Synonym: Saro_0564
Alternate gene names: NA
Gene position: 612960-612277 (Counterclockwise)
Preceding gene: 87198589
Following gene: 87198586
Centisome position: 17.21
GC content: 68.42
Gene sequence:
>684_bases GTGAGCTACGTCCTCGTCACGGCGAACCGCAATTATTCGAGCTGGTCGCTGCGCCCGTGGGTGCTGATGAAGGCGCTCGG CATTCCTTTCGAGGACCGCGTCGAGCCCTTCACCCGGCCGGTCAACTACGACGAGTTCCGCGCCTTCTCGCCGACCGGCC AGGTACCAGTGCTGATCGACGGGACGCGCACGGTGTGGGACTCGCTCGGCATTGCGCTCTACCTGGCCGAACGCCACGGC GGGGTCTGGCCGCAGGACGAGGAGGCGCGGGCCTTTGCGTTCTGCGCGGTGGCCGAGATGCACGGCGGCTTTTCGGCGCT GCGCAACGACTGCACGATGAACGTCGGCGTGCGGGTGAAGCCGCGCCCGATGCGGCCGGCGCTGGTGCGCGACATTGCCC GCGTGCGCGAGATCTTCGAGGAAGGACTAGCCCGGTTCGGCGGCCCCTGGCTGGCGGGCGACAACTTTACCGCGCTCGAC GCCTTCTTCGCCCCGGTCGCCTTCCGCATTCGCACCTACGGACTTGACGTCGGCAAGGGACAGGCATGGGTCGACCGCGT CCTCGCCCACCCCGCCATGCTGCAATGGGAGGCCGAGGCGCTGGAAGAAAGCTGGCGCGAGGAAGGCCACGAGGCCGAAC TGGCGGAATGCGGCGAGATCGTCGCCGACTTCCGCAAGCGCTGA
Upstream 100 bases:
>100_bases GGACGCGACGGCGAGGTCGCGGCGCGCTTTGCCCCCGGCGTCACCCCTGACGACCCCGCGCTGCTGGCAGCGATCGACGC CGAACTGGCAAAGTGACCGC
Downstream 100 bases:
>100_bases TCAGCTCTCGGAAGGGCCCGGACCGTTCGCGCCATCCTTTTCGCGGGCGTTGAGCTTGGCCCACAGGTTCTCGGTCCCGG CCTCGACCGCCTTGTTCACG
Product: glutathione S-transferase-like protein
Products: NA
Alternate protein names: Glutathione S-Transferase Domain-Containing Protein; Glutathione S-Transferase Domain Protein; Glutathione S-Transferase Family Protein; Glutathione S-Transferase-Like Protein; Glutathione S-Transferase-Like; Glutathione-S-Transferase Protein; Glutathione S-Transferase Protein; Glutathione S-Transferase N-Terminal Domain Protein; Glutathione S-Transferase Domain; Glutathione S-Transferase N-Terminal Domain-Containing; Maleylacetoacetate Isomerase; Stringent Starvation Protein A; GSH-Dependent Dehydroascorbate Reductase; Glutathione S-Transferase N-Terminal; Glutathione-S-Tranferase Family Protein
Number of amino acids: Translated: 227; Mature: 226
Protein sequence:
>227_residues MSYVLVTANRNYSSWSLRPWVLMKALGIPFEDRVEPFTRPVNYDEFRAFSPTGQVPVLIDGTRTVWDSLGIALYLAERHG GVWPQDEEARAFAFCAVAEMHGGFSALRNDCTMNVGVRVKPRPMRPALVRDIARVREIFEEGLARFGGPWLAGDNFTALD AFFAPVAFRIRTYGLDVGKGQAWVDRVLAHPAMLQWEAEALEESWREEGHEAELAECGEIVADFRKR
Sequences:
>Translated_227_residues MSYVLVTANRNYSSWSLRPWVLMKALGIPFEDRVEPFTRPVNYDEFRAFSPTGQVPVLIDGTRTVWDSLGIALYLAERHG GVWPQDEEARAFAFCAVAEMHGGFSALRNDCTMNVGVRVKPRPMRPALVRDIARVREIFEEGLARFGGPWLAGDNFTALD AFFAPVAFRIRTYGLDVGKGQAWVDRVLAHPAMLQWEAEALEESWREEGHEAELAECGEIVADFRKR >Mature_226_residues SYVLVTANRNYSSWSLRPWVLMKALGIPFEDRVEPFTRPVNYDEFRAFSPTGQVPVLIDGTRTVWDSLGIALYLAERHGG VWPQDEEARAFAFCAVAEMHGGFSALRNDCTMNVGVRVKPRPMRPALVRDIARVREIFEEGLARFGGPWLAGDNFTALDA FFAPVAFRIRTYGLDVGKGQAWVDRVLAHPAMLQWEAEALEESWREEGHEAELAECGEIVADFRKR
Specific function: Unknown
COG id: COG0625
COG function: function code O; Glutathione S-transferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25664; Mature: 25533
Theoretical pI: Translated: 5.18; Mature: 5.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSYVLVTANRNYSSWSLRPWVLMKALGIPFEDRVEPFTRPVNYDEFRAFSPTGQVPVLID CCEEEEEECCCCCCCCCCHHHHHHHHCCCCHHHCCHHHCCCCHHHHEEECCCCCEEEEEC GTRTVWDSLGIALYLAERHGGVWPQDEEARAFAFCAVAEMHGGFSALRNDCTMNVGVRVK CCHHHHHHCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHCCCEECCCEEEC PRPMRPALVRDIARVREIFEEGLARFGGPWLAGDNFTALDAFFAPVAFRIRTYGLDVGKG CCCCCHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCHHHHHHHHHHHHHHHEECCCCCCC QAWVDRVLAHPAMLQWEAEALEESWREEGHEAELAECGEIVADFRKR HHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCC >Mature Secondary Structure SYVLVTANRNYSSWSLRPWVLMKALGIPFEDRVEPFTRPVNYDEFRAFSPTGQVPVLID CEEEEEECCCCCCCCCCHHHHHHHHCCCCHHHCCHHHCCCCHHHHEEECCCCCEEEEEC GTRTVWDSLGIALYLAERHGGVWPQDEEARAFAFCAVAEMHGGFSALRNDCTMNVGVRVK CCHHHHHHCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHCCCEECCCEEEC PRPMRPALVRDIARVREIFEEGLARFGGPWLAGDNFTALDAFFAPVAFRIRTYGLDVGKG CCCCCHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCHHHHHHHHHHHHHHHEECCCCCCC QAWVDRVLAHPAMLQWEAEALEESWREEGHEAELAECGEIVADFRKR HHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA