| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is 87198267
Identifier: 87198267
GI number: 87198267
Start: 250407
End: 250910
Strand: Direct
Name: 87198267
Synonym: Saro_0242
Alternate gene names: NA
Gene position: 250407-250910 (Clockwise)
Preceding gene: 87198266
Following gene: 87198269
Centisome position: 7.03
GC content: 67.06
Gene sequence:
>504_bases ATGTCCGAATCGGTATCTGCCTCTGCGGAAGTCACTGTCGAAGCTGCGGTCGAGCGCGAGGCGCGCGGCGTGGCGCGCGG CATCTGTCGCCTCTTCGCGCGCAACGACATCTGGTGCCTGCCCGAAATGCCGCTGCGTTCGGGCAGGCGCGCCGACCTCA TGGGCATCGATGCCAAGGGGCAGGTCGTGATCGTCGAGATCAAGGTGAGCCGCGCCGATCTTCTCGGCGACGGCAAGTGG ACCGATTACCTGGATCATTGCGACCGCTTCTACTGGGGCCTCGCGCCTCATCTCGACCGCGCCGTGCTGGAGACCGAGGA TTTCCTGCCCCATGCCTGCGGCGTGATCGTGGCGGATGGTTATGATGCCGAAATCGTCCGTCCCGCGCCCACGGTGCCGC TCGCTGCTGCGCGGCGAAAGGCAGAAGTGGAACGGCTTGCCCGCGCTTCGCTGCGCCGTCAGCTGGTCGGGCTCGATCCG CATTGCGCCGCCTGGGGCGGCTGA
Upstream 100 bases:
>100_bases GGGCGTGTGGCTGTTCATCCAGACGCTCGGCATCTGGTAAGGCCGGGCCGCAGGGTCGGGCGGGGTTTACCTGTTCAGCG TTTGTTCCTAATCTGATCGC
Downstream 100 bases:
>100_bases GACAATCGGAGGTCTGGTCAGGTCCGGCGCTTGATGCCTGGCGGCGGCACCAGTGCCAGCAGCGCGGCGCGGGCGGCAAC GAATTCGTGCCAGAGGGCGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 167; Mature: 166
Protein sequence:
>167_residues MSESVSASAEVTVEAAVEREARGVARGICRLFARNDIWCLPEMPLRSGRRADLMGIDAKGQVVIVEIKVSRADLLGDGKW TDYLDHCDRFYWGLAPHLDRAVLETEDFLPHACGVIVADGYDAEIVRPAPTVPLAAARRKAEVERLARASLRRQLVGLDP HCAAWGG
Sequences:
>Translated_167_residues MSESVSASAEVTVEAAVEREARGVARGICRLFARNDIWCLPEMPLRSGRRADLMGIDAKGQVVIVEIKVSRADLLGDGKW TDYLDHCDRFYWGLAPHLDRAVLETEDFLPHACGVIVADGYDAEIVRPAPTVPLAAARRKAEVERLARASLRRQLVGLDP HCAAWGG >Mature_166_residues SESVSASAEVTVEAAVEREARGVARGICRLFARNDIWCLPEMPLRSGRRADLMGIDAKGQVVIVEIKVSRADLLGDGKWT DYLDHCDRFYWGLAPHLDRAVLETEDFLPHACGVIVADGYDAEIVRPAPTVPLAAARRKAEVERLARASLRRQLVGLDPH CAAWGG
Specific function: Unknown
COG id: COG5321
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18319; Mature: 18188
Theoretical pI: Translated: 6.12; Mature: 6.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSESVSASAEVTVEAAVEREARGVARGICRLFARNDIWCLPEMPLRSGRRADLMGIDAKG CCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCEEEECCCC QVVIVEIKVSRADLLGDGKWTDYLDHCDRFYWGLAPHLDRAVLETEDFLPHACGVIVADG CEEEEEEEECCHHHCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCEEEECC YDAEIVRPAPTVPLAAARRKAEVERLARASLRRQLVGLDPHCAAWGG CCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure SESVSASAEVTVEAAVEREARGVARGICRLFARNDIWCLPEMPLRSGRRADLMGIDAKG CCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCEEEECCCC QVVIVEIKVSRADLLGDGKWTDYLDHCDRFYWGLAPHLDRAVLETEDFLPHACGVIVADG CEEEEEEEECCHHHCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCEEEECC YDAEIVRPAPTVPLAAARRKAEVERLARASLRRQLVGLDPHCAAWGG CCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA