| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is modB [H]
Identifier: 87198238
GI number: 87198238
Start: 222107
End: 222826
Strand: Direct
Name: modB [H]
Synonym: Saro_0213
Alternate gene names: 87198238
Gene position: 222107-222826 (Clockwise)
Preceding gene: 87198237
Following gene: 87198239
Centisome position: 6.24
GC content: 70.28
Gene sequence:
>720_bases ATGGGTTCGGCGCGAGATGACGGCAGCGCGCTGATGGGGCCCGAGGAATGGGAGATCGTGCGCCTTTCGCTCAAGGTCAG CGCGGTTGCGGTGGGCGCATGCCTGCCGGTTGCCTTTGCGCTGGCATGGATACTGGCGCGCGGGCGCTTTGCCGGGCTGG TGCTGCTCGATGCGCTGGTGCACCTGCCGCTGGTCCTGCCGCCGGTCGTGACGGGCTGGCTGCTCCTGATCGCATTCGGG CCGCAGGGGCCGGCGGGACGCTGGCTGGAAAGCTGGATCGGGCTGACGTTCCTGTTCCGCTGGACCGGCGCCGCTCTTGC CGCCGCCGTCATGGCCCTGCCGCTGATGGTGCGTGCGATCCGGCTTTCCATCGAGGGCGTGGACCGGCGGCTCGAGGCGG CGGCGATGACGCTGGGCGCGTCGCGCTGGCGGGTGTTCCGCACGATCACCCTGCCCCTGGCGCTTCCCGGCGTGGTTGCC GGCGCGGTGCTGGGCTTCGCGCGCTCGCTTGGTGAATTCGGCGCGACGATCACGTTCGTATCCAACATTCCGGGCGAGAC GCGGACTCTGCCTCTGGCGATCTATAGTGCGCTTCAGGTGCCCGGGGCGGAAGCCGAAGTCACGCGGCTGGCGCTGGTTT CGGTCCTGCTGTCGCTGGCGGCGCTGGTCGTGTCCGAAGTGCTGGCGCGGCGGGCGGGAAGGGCGGGCCATGTCCTTTGA
Upstream 100 bases:
>100_bases ACTTATCCGGTCGCTCTCCTGAAGACATCGCGAAACCCGCAGGCCGAGGGCTTCCGGCGCTTCCTGATCTCGCGCGAGGG GCGGGCGATCCTGGCGCGGC
Downstream 100 bases:
>100_bases GGTCCGCGTCCGTAAGCGGCTGGGCGATACCGTGGTCGGCGCGACCTTTGCCGCCGAGGGGGGGCTGACCGCGCTGTTCG GGCCATCGGGCGCGGGCAAG
Product: molybdate ABC transporter permease
Products: ADP; phosphate; MoO42- [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 239; Mature: 238
Protein sequence:
>239_residues MGSARDDGSALMGPEEWEIVRLSLKVSAVAVGACLPVAFALAWILARGRFAGLVLLDALVHLPLVLPPVVTGWLLLIAFG PQGPAGRWLESWIGLTFLFRWTGAALAAAVMALPLMVRAIRLSIEGVDRRLEAAAMTLGASRWRVFRTITLPLALPGVVA GAVLGFARSLGEFGATITFVSNIPGETRTLPLAIYSALQVPGAEAEVTRLALVSVLLSLAALVVSEVLARRAGRAGHVL
Sequences:
>Translated_239_residues MGSARDDGSALMGPEEWEIVRLSLKVSAVAVGACLPVAFALAWILARGRFAGLVLLDALVHLPLVLPPVVTGWLLLIAFG PQGPAGRWLESWIGLTFLFRWTGAALAAAVMALPLMVRAIRLSIEGVDRRLEAAAMTLGASRWRVFRTITLPLALPGVVA GAVLGFARSLGEFGATITFVSNIPGETRTLPLAIYSALQVPGAEAEVTRLALVSVLLSLAALVVSEVLARRAGRAGHVL >Mature_238_residues GSARDDGSALMGPEEWEIVRLSLKVSAVAVGACLPVAFALAWILARGRFAGLVLLDALVHLPLVLPPVVTGWLLLIAFGP QGPAGRWLESWIGLTFLFRWTGAALAAAVMALPLMVRAIRLSIEGVDRRLEAAAMTLGASRWRVFRTITLPLALPGVVAG AVLGFARSLGEFGATITFVSNIPGETRTLPLAIYSALQVPGAEAEVTRLALVSVLLSLAALVVSEVLARRAGRAGHVL
Specific function: Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG4149
COG function: function code P; ABC-type molybdate transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1786980, Length=223, Percent_Identity=61.4349775784753, Blast_Score=233, Evalue=1e-62, Organism=Escherichia coli, GI1788764, Length=159, Percent_Identity=42.7672955974843, Blast_Score=115, Evalue=3e-27, Organism=Escherichia coli, GI87082099, Length=235, Percent_Identity=31.9148936170213, Blast_Score=106, Evalue=2e-24, Organism=Escherichia coli, GI1787368, Length=197, Percent_Identity=32.994923857868, Blast_Score=75, Evalue=4e-15, Organism=Escherichia coli, GI1787369, Length=190, Percent_Identity=28.9473684210526, Blast_Score=71, Evalue=6e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 - InterPro: IPR011867 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 25129; Mature: 24998
Theoretical pI: Translated: 11.36; Mature: 11.36
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGSARDDGSALMGPEEWEIVRLSLKVSAVAVGACLPVAFALAWILARGRFAGLVLLDALV CCCCCCCCCCCCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH HLPLVLPPVVTGWLLLIAFGPQGPAGRWLESWIGLTFLFRWTGAALAAAVMALPLMVRAI HHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RLSIEGVDRRLEAAAMTLGASRWRVFRTITLPLALPGVVAGAVLGFARSLGEFGATITFV HHHHHHHHHHHHHHHHHHHHHHHHHHHEEEHHHHHHHHHHHHHHHHHHHHHHHCCEEEEE SNIPGETRTLPLAIYSALQVPGAEAEVTRLALVSVLLSLAALVVSEVLARRAGRAGHVL ECCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure GSARDDGSALMGPEEWEIVRLSLKVSAVAVGACLPVAFALAWILARGRFAGLVLLDALV CCCCCCCCCCCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH HLPLVLPPVVTGWLLLIAFGPQGPAGRWLESWIGLTFLFRWTGAALAAAVMALPLMVRAI HHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RLSIEGVDRRLEAAAMTLGASRWRVFRTITLPLALPGVVAGAVLGFARSLGEFGATITFV HHHHHHHHHHHHHHHHHHHHHHHHHHHEEEHHHHHHHHHHHHHHHHHHHHHHHCCEEEEE SNIPGETRTLPLAIYSALQVPGAEAEVTRLALVSVLLSLAALVVSEVLARRAGRAGHVL ECCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; MoO42- [Periplasm]; H2O [C]
Specific reaction: ATP + MoO42- [Periplasm] + H2O = ADP + phosphate + MoO42- [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]