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The map label for this gene is yjiR [C]

Identifier: 87198190

GI number: 87198190

Start: 163049

End: 163438

Strand: Direct

Name: yjiR [C]

Synonym: Saro_0164

Alternate gene names: 87198190

Gene position: 163049-163438 (Clockwise)

Preceding gene: 87198187

Following gene: 87198191

Centisome position: 4.58

GC content: 64.36

Gene sequence:

>390_bases
ATGGGGGCGCCGTTGTATCGCGGGCTGTATTATGGCAATATAGCACCCATGAGCAGCTCAAGCCGCCCCGTCTACCTGCG
CCTGCGTGACGAGATCGCTGCGGGCATCATCGACGGGCGCTATCCCGAAGGTGCTGTGCTGCCTTCGGTCCGGGCATTCG
CTACCGAACAGGGCGCGAATCCGCTGACCGTCGCCAAGGCCTACCAGCAGTTTCAGGACGAGGGACTGGTGACCGTCCAG
CGTGGCATCGGCATGTTCGTGGCGCCCGGTGCCGCGACCGCCCTTCTGGCGCGAGAGCGTCAAACCTTCCTTCGCGACGA
GTGGCCGGAAATCGCCGGCCGGATCCGACGTCTGGGATTGTCGCTTGCAGACTTGGCGGAATTGGCCTGA

Upstream 100 bases:

>100_bases
GCGCAGGTGTTGCCGGCATTACTGGCACGTCTGGCCACGGCAAGAAACTAATTTCGTTGGCAACCATCGGCTGGTCAGGC
TGCGGCTGCGGAAGCAACGC

Downstream 100 bases:

>100_bases
AACGGTTCAAATTCAGGCAGATTCGACGATATCAACCGATTGTGTTGCGCTGTCATGCATGGCAGGATCACCGCTTGTGC
TCGTACGGGGGTTCGGGCGC

Product: GntR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator GntR Family; Transcriptional Regulator; Transcriptional Regulator GntR Family Protein; Transcriptional Regulator Gntr Family; GntR-Family Transcriptional Regulator; Transcriptional Regulatory Protein; Transcriptional Regulator Transcription Regulator Protein

Number of amino acids: Translated: 129; Mature: 128

Protein sequence:

>129_residues
MGAPLYRGLYYGNIAPMSSSSRPVYLRLRDEIAAGIIDGRYPEGAVLPSVRAFATEQGANPLTVAKAYQQFQDEGLVTVQ
RGIGMFVAPGAATALLARERQTFLRDEWPEIAGRIRRLGLSLADLAELA

Sequences:

>Translated_129_residues
MGAPLYRGLYYGNIAPMSSSSRPVYLRLRDEIAAGIIDGRYPEGAVLPSVRAFATEQGANPLTVAKAYQQFQDEGLVTVQ
RGIGMFVAPGAATALLARERQTFLRDEWPEIAGRIRRLGLSLADLAELA
>Mature_128_residues
GAPLYRGLYYGNIAPMSSSSRPVYLRLRDEIAAGIIDGRYPEGAVLPSVRAFATEQGANPLTVAKAYQQFQDEGLVTVQR
GIGMFVAPGAATALLARERQTFLRDEWPEIAGRIRRLGLSLADLAELA

Specific function: Unknown

COG id: COG1725

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14010; Mature: 13879

Theoretical pI: Translated: 8.87; Mature: 8.87

Prosite motif: PS50949 HTH_GNTR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGAPLYRGLYYGNIAPMSSSSRPVYLRLRDEIAAGIIDGRYPEGAVLPSVRAFATEQGAN
CCCCCCCCEEECCCCCCCCCCCCEEEEEHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCC
PLTVAKAYQQFQDEGLVTVQRGIGMFVAPGAATALLARERQTFLRDEWPEIAGRIRRLGL
CHHHHHHHHHHHCCCCEEEECCCCEEECCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHCC
SLADLAELA
CHHHHHHCC
>Mature Secondary Structure 
GAPLYRGLYYGNIAPMSSSSRPVYLRLRDEIAAGIIDGRYPEGAVLPSVRAFATEQGAN
CCCCCCCEEECCCCCCCCCCCCEEEEEHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCC
PLTVAKAYQQFQDEGLVTVQRGIGMFVAPGAATALLARERQTFLRDEWPEIAGRIRRLGL
CHHHHHHHHHHHCCCCEEEECCCCEEECCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHCC
SLADLAELA
CHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA