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The map label for this gene is hslR [C]

Identifier: 87198148

GI number: 87198148

Start: 125747

End: 126037

Strand: Direct

Name: hslR [C]

Synonym: Saro_0122

Alternate gene names: 87198148

Gene position: 125747-126037 (Clockwise)

Preceding gene: 87198147

Following gene: 87198149

Centisome position: 3.53

GC content: 64.26

Gene sequence:

>291_bases
TTGCGGATCGACAAGTTCCTCTGGTTCACGCGTTTCGCCGGAACTCGCAATCTTGCGCAAGGTTGGGTCGAGGACGGCCA
TATCCGCCTCAACGGCCGCCGGATCGAGCGGTGCAGCGCGGACGTAAGGCTGGGCGACGTACTGGTCCTGCCGATGCGCA
GCCGGGTCACCGTTATAGAGGTTCTGGCCCTTCCCGCCCGTCGCGGACCTGCTCCCGAAGCACAGGCCTGCTATCGGGTG
CTTGACGGGCCGGGTGCAACGCCTCTAGCACGGCCTCAAACAGATACCTGA

Upstream 100 bases:

>100_bases
CGACGACTGCATCTGACGCGCCACCACCGCCTCGTCCGCCCATCGGGGCCTTTGCCGCGCTGGCCGACCTGGTCGGGCGT
TAGCGAGGGAGAGCGCCCGG

Downstream 100 bases:

>100_bases
GGGACAATTCGCCATGACCTACGTCGTCACCGACGCCTGTATCCGCTGCAAGTTCATGGACTGCGTCGAGGTTTGCCCCG
TCGACTGCTTCTACGAAGGC

Product: RNA-binding S4

Products: NA

Alternate protein names: S4 Domain-Containing Protein; HEAT Shock-Like Protein; Ribosome-Associated Heat Shock Protein; Hsp15-Like Protein; S4 Domain Protein

Number of amino acids: Translated: 96; Mature: 96

Protein sequence:

>96_residues
MRIDKFLWFTRFAGTRNLAQGWVEDGHIRLNGRRIERCSADVRLGDVLVLPMRSRVTVIEVLALPARRGPAPEAQACYRV
LDGPGATPLARPQTDT

Sequences:

>Translated_96_residues
MRIDKFLWFTRFAGTRNLAQGWVEDGHIRLNGRRIERCSADVRLGDVLVLPMRSRVTVIEVLALPARRGPAPEAQACYRV
LDGPGATPLARPQTDT
>Mature_96_residues
MRIDKFLWFTRFAGTRNLAQGWVEDGHIRLNGRRIERCSADVRLGDVLVLPMRSRVTVIEVLALPARRGPAPEAQACYRV
LDGPGATPLARPQTDT

Specific function: Involved In The Recycling Of Free 50s Ribosomal Subunits That Still Carry A Nascent Chain. Binds RNA More Specifically Than DNA. Binds With Very High Affinity To The Free 50s Ribosomal Subunit. Does Not Bind It When It Is Part Of The 70s Ribosome. [C]

COG id: COG1188

COG function: function code J; Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10741; Mature: 10741

Theoretical pI: Translated: 11.05; Mature: 11.05

Prosite motif: PS50889 S4

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIDKFLWFTRFAGTRNLAQGWVEDGHIRLNGRRIERCSADVRLGDVLVLPMRSRVTVIE
CCCCHHHHHHHHCCCCCHHHCCCCCCEEEECCCEEECCCCCCEECCEEEECCCCCEEEEH
VLALPARRGPAPEAQACYRVLDGPGATPLARPQTDT
EECCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure
MRIDKFLWFTRFAGTRNLAQGWVEDGHIRLNGRRIERCSADVRLGDVLVLPMRSRVTVIE
CCCCHHHHHHHHCCCCCHHHCCCCCCEEEECCCEEECCCCCCEECCEEEECCCCCEEEEH
VLALPARRGPAPEAQACYRVLDGPGATPLARPQTDT
EECCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA