Definition Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome.
Accession NC_007794
Length 3,561,584

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The map label for this gene is 87198128

Identifier: 87198128

GI number: 87198128

Start: 105225

End: 105974

Strand: Direct

Name: 87198128

Synonym: Saro_0102

Alternate gene names: NA

Gene position: 105225-105974 (Clockwise)

Preceding gene: 87198127

Following gene: 87198130

Centisome position: 2.95

GC content: 66.53

Gene sequence:

>750_bases
ATGGACGCACTGATCATCGCCGCCGGTTACGGCAGCCGTCTTGCCGACCTTTCCCCTTCCAAGCCGCTGACGCCGGTCGC
CGGGGTGCCGCTGATCGAGATCGGGGTGCGCCAGGCAATGGAAGCCGGCGTGACGCGCGTCGTCGTGGTCACCGGACACA
AGGCCGACATGGTCGAAGCGTTCCTGGCGGACCTGTCGCAGCGTGCGGGAATCGAAATCGTTCCAGTGCGCCTGTCCGAC
TGGTCGACGCCCAACGGGCACTCGGTCATGGCCGGCGCCACGCGGTGCGAGGGCAACTACCTGCTGATGATGGCCGACCA
CATGTTCGAGGCCGATATTCTGGCGCGGCTTCTGCTCGAGGACCGGCCCGAGCGCGGCGTCACGCTCGCGATCGATCGTC
GTACCGACAATCCGCTGGTCGATCCGGACGACGCGACCTGGGTGAAAATGGACGATGAAGGCCGCATAACCGCCATCGGC
AAGACCATTGCCCCCTATGACGCGGTCGATTGCGGGGCCTTCCTGGCAACGCCTGAACTGGCCGTGGCGATCCGCGAGGC
CATTGCCGAGGGCAAGCCCGGAAGCCTTTCGGACGGAATGCAGCGCCTTGCCGATGCCGGACGTGCCGGAACGATGGACA
TCGAGGATGCGTGGTGGATGGACGTGGACGATCCGCGCGCCCACGCGCTGGCCGAGGAACTGGCCCCCTGGCACCTTGCA
CGGACCTTCGCCGCGATCGGTCAGGACTGA

Upstream 100 bases:

>100_bases
GAATAAGCGACCGCTCCAAAGCGACTGAAAAAGGCCGACCGGGCGATTCGTCTGGTCGGCCTTTTCGTTTGATGCCCCAG
ACGACTTTCCGGAAATTGCC

Downstream 100 bases:

>100_bases
GCGCCCTTCGGTGGCCGGGGAGCAGCGCTCCCCGGCAACTGATCAGGGGTACTTGAGGTGGATGCGGGTCGACAGGCCCG
TCTTCGAGATATTCAGTCGC

Product: nucleotidyl transferase

Products: diphosphate; dTDPglucose

Alternate protein names: CDP-Alcohol Phosphatidyltransferase; Nucleotidyltransferase Family Protein; Glucose-1-Phosphate Thymidylyltransferase; Glucose-1-Phosphate Thymidylyltransferase Related Protein; Sugar Nucleotidyltransferase; CTPInositol-1-Phosphate Cytidylyltransferase; UTP-Glucose-1-Phosphate Uridylyltransferase

Number of amino acids: Translated: 249; Mature: 249

Protein sequence:

>249_residues
MDALIIAAGYGSRLADLSPSKPLTPVAGVPLIEIGVRQAMEAGVTRVVVVTGHKADMVEAFLADLSQRAGIEIVPVRLSD
WSTPNGHSVMAGATRCEGNYLLMMADHMFEADILARLLLEDRPERGVTLAIDRRTDNPLVDPDDATWVKMDDEGRITAIG
KTIAPYDAVDCGAFLATPELAVAIREAIAEGKPGSLSDGMQRLADAGRAGTMDIEDAWWMDVDDPRAHALAEELAPWHLA
RTFAAIGQD

Sequences:

>Translated_249_residues
MDALIIAAGYGSRLADLSPSKPLTPVAGVPLIEIGVRQAMEAGVTRVVVVTGHKADMVEAFLADLSQRAGIEIVPVRLSD
WSTPNGHSVMAGATRCEGNYLLMMADHMFEADILARLLLEDRPERGVTLAIDRRTDNPLVDPDDATWVKMDDEGRITAIG
KTIAPYDAVDCGAFLATPELAVAIREAIAEGKPGSLSDGMQRLADAGRAGTMDIEDAWWMDVDDPRAHALAEELAPWHLA
RTFAAIGQD
>Mature_249_residues
MDALIIAAGYGSRLADLSPSKPLTPVAGVPLIEIGVRQAMEAGVTRVVVVTGHKADMVEAFLADLSQRAGIEIVPVRLSD
WSTPNGHSVMAGATRCEGNYLLMMADHMFEADILARLLLEDRPERGVTLAIDRRTDNPLVDPDDATWVKMDDEGRITAIG
KTIAPYDAVDCGAFLATPELAVAIREAIAEGKPGSLSDGMQRLADAGRAGTMDIEDAWWMDVDDPRAHALAEELAPWHLA
RTFAAIGQD

Specific function: Unknown

COG id: COG1213

COG function: function code M; Predicted sugar nucleotidyltransferases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 2.7.7.24

Molecular weight: Translated: 26712; Mature: 26712

Theoretical pI: Translated: 4.30; Mature: 4.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDALIIAAGYGSRLADLSPSKPLTPVAGVPLIEIGVRQAMEAGVTRVVVVTGHKADMVEA
CCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEEECCCHHHHHH
FLADLSQRAGIEIVPVRLSDWSTPNGHSVMAGATRCEGNYLLMMADHMFEADILARLLLE
HHHHHHHHCCCEEEEEEECCCCCCCCCEEEECCEEECCCEEEEEECHHHHHHHHHHHHHH
DRPERGVTLAIDRRTDNPLVDPDDATWVKMDDEGRITAIGKTIAPYDAVDCGAFLATPEL
CCCCCCEEEEEECCCCCCCCCCCCCEEEEECCCCCEEEECCCCCCCCCCCCCHHHCCHHH
AVAIREAIAEGKPGSLSDGMQRLADAGRAGTMDIEDAWWMDVDDPRAHALAEELAPWHLA
HHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCEEECCCCHHHHHHHHHHCHHHHH
RTFAAIGQD
HHHHHHCCC
>Mature Secondary Structure
MDALIIAAGYGSRLADLSPSKPLTPVAGVPLIEIGVRQAMEAGVTRVVVVTGHKADMVEA
CCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEEECCCHHHHHH
FLADLSQRAGIEIVPVRLSDWSTPNGHSVMAGATRCEGNYLLMMADHMFEADILARLLLE
HHHHHHHHCCCEEEEEEECCCCCCCCCEEEECCEEECCCEEEEEECHHHHHHHHHHHHHH
DRPERGVTLAIDRRTDNPLVDPDDATWVKMDDEGRITAIGKTIAPYDAVDCGAFLATPEL
CCCCCCEEEEEECCCCCCCCCCCCCEEEEECCCCCEEEECCCCCCCCCCCCCHHHCCHHH
AVAIREAIAEGKPGSLSDGMQRLADAGRAGTMDIEDAWWMDVDDPRAHALAEELAPWHLA
HHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCEEECCCCHHHHHHHHHHCHHHHH
RTFAAIGQD
HHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: dTTP; alpha-D-glucose 1-phosphate

Specific reaction: dTTP + alpha-D-glucose 1-phosphate = diphosphate + dTDP-glucose

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA