| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is 87198128
Identifier: 87198128
GI number: 87198128
Start: 105225
End: 105974
Strand: Direct
Name: 87198128
Synonym: Saro_0102
Alternate gene names: NA
Gene position: 105225-105974 (Clockwise)
Preceding gene: 87198127
Following gene: 87198130
Centisome position: 2.95
GC content: 66.53
Gene sequence:
>750_bases ATGGACGCACTGATCATCGCCGCCGGTTACGGCAGCCGTCTTGCCGACCTTTCCCCTTCCAAGCCGCTGACGCCGGTCGC CGGGGTGCCGCTGATCGAGATCGGGGTGCGCCAGGCAATGGAAGCCGGCGTGACGCGCGTCGTCGTGGTCACCGGACACA AGGCCGACATGGTCGAAGCGTTCCTGGCGGACCTGTCGCAGCGTGCGGGAATCGAAATCGTTCCAGTGCGCCTGTCCGAC TGGTCGACGCCCAACGGGCACTCGGTCATGGCCGGCGCCACGCGGTGCGAGGGCAACTACCTGCTGATGATGGCCGACCA CATGTTCGAGGCCGATATTCTGGCGCGGCTTCTGCTCGAGGACCGGCCCGAGCGCGGCGTCACGCTCGCGATCGATCGTC GTACCGACAATCCGCTGGTCGATCCGGACGACGCGACCTGGGTGAAAATGGACGATGAAGGCCGCATAACCGCCATCGGC AAGACCATTGCCCCCTATGACGCGGTCGATTGCGGGGCCTTCCTGGCAACGCCTGAACTGGCCGTGGCGATCCGCGAGGC CATTGCCGAGGGCAAGCCCGGAAGCCTTTCGGACGGAATGCAGCGCCTTGCCGATGCCGGACGTGCCGGAACGATGGACA TCGAGGATGCGTGGTGGATGGACGTGGACGATCCGCGCGCCCACGCGCTGGCCGAGGAACTGGCCCCCTGGCACCTTGCA CGGACCTTCGCCGCGATCGGTCAGGACTGA
Upstream 100 bases:
>100_bases GAATAAGCGACCGCTCCAAAGCGACTGAAAAAGGCCGACCGGGCGATTCGTCTGGTCGGCCTTTTCGTTTGATGCCCCAG ACGACTTTCCGGAAATTGCC
Downstream 100 bases:
>100_bases GCGCCCTTCGGTGGCCGGGGAGCAGCGCTCCCCGGCAACTGATCAGGGGTACTTGAGGTGGATGCGGGTCGACAGGCCCG TCTTCGAGATATTCAGTCGC
Product: nucleotidyl transferase
Products: diphosphate; dTDPglucose
Alternate protein names: CDP-Alcohol Phosphatidyltransferase; Nucleotidyltransferase Family Protein; Glucose-1-Phosphate Thymidylyltransferase; Glucose-1-Phosphate Thymidylyltransferase Related Protein; Sugar Nucleotidyltransferase; CTPInositol-1-Phosphate Cytidylyltransferase; UTP-Glucose-1-Phosphate Uridylyltransferase
Number of amino acids: Translated: 249; Mature: 249
Protein sequence:
>249_residues MDALIIAAGYGSRLADLSPSKPLTPVAGVPLIEIGVRQAMEAGVTRVVVVTGHKADMVEAFLADLSQRAGIEIVPVRLSD WSTPNGHSVMAGATRCEGNYLLMMADHMFEADILARLLLEDRPERGVTLAIDRRTDNPLVDPDDATWVKMDDEGRITAIG KTIAPYDAVDCGAFLATPELAVAIREAIAEGKPGSLSDGMQRLADAGRAGTMDIEDAWWMDVDDPRAHALAEELAPWHLA RTFAAIGQD
Sequences:
>Translated_249_residues MDALIIAAGYGSRLADLSPSKPLTPVAGVPLIEIGVRQAMEAGVTRVVVVTGHKADMVEAFLADLSQRAGIEIVPVRLSD WSTPNGHSVMAGATRCEGNYLLMMADHMFEADILARLLLEDRPERGVTLAIDRRTDNPLVDPDDATWVKMDDEGRITAIG KTIAPYDAVDCGAFLATPELAVAIREAIAEGKPGSLSDGMQRLADAGRAGTMDIEDAWWMDVDDPRAHALAEELAPWHLA RTFAAIGQD >Mature_249_residues MDALIIAAGYGSRLADLSPSKPLTPVAGVPLIEIGVRQAMEAGVTRVVVVTGHKADMVEAFLADLSQRAGIEIVPVRLSD WSTPNGHSVMAGATRCEGNYLLMMADHMFEADILARLLLEDRPERGVTLAIDRRTDNPLVDPDDATWVKMDDEGRITAIG KTIAPYDAVDCGAFLATPELAVAIREAIAEGKPGSLSDGMQRLADAGRAGTMDIEDAWWMDVDDPRAHALAEELAPWHLA RTFAAIGQD
Specific function: Unknown
COG id: COG1213
COG function: function code M; Predicted sugar nucleotidyltransferases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 2.7.7.24
Molecular weight: Translated: 26712; Mature: 26712
Theoretical pI: Translated: 4.30; Mature: 4.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDALIIAAGYGSRLADLSPSKPLTPVAGVPLIEIGVRQAMEAGVTRVVVVTGHKADMVEA CCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEEECCCHHHHHH FLADLSQRAGIEIVPVRLSDWSTPNGHSVMAGATRCEGNYLLMMADHMFEADILARLLLE HHHHHHHHCCCEEEEEEECCCCCCCCCEEEECCEEECCCEEEEEECHHHHHHHHHHHHHH DRPERGVTLAIDRRTDNPLVDPDDATWVKMDDEGRITAIGKTIAPYDAVDCGAFLATPEL CCCCCCEEEEEECCCCCCCCCCCCCEEEEECCCCCEEEECCCCCCCCCCCCCHHHCCHHH AVAIREAIAEGKPGSLSDGMQRLADAGRAGTMDIEDAWWMDVDDPRAHALAEELAPWHLA HHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCEEECCCCHHHHHHHHHHCHHHHH RTFAAIGQD HHHHHHCCC >Mature Secondary Structure MDALIIAAGYGSRLADLSPSKPLTPVAGVPLIEIGVRQAMEAGVTRVVVVTGHKADMVEA CCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEEECCCHHHHHH FLADLSQRAGIEIVPVRLSDWSTPNGHSVMAGATRCEGNYLLMMADHMFEADILARLLLE HHHHHHHHCCCEEEEEEECCCCCCCCCEEEECCEEECCCEEEEEECHHHHHHHHHHHHHH DRPERGVTLAIDRRTDNPLVDPDDATWVKMDDEGRITAIGKTIAPYDAVDCGAFLATPEL CCCCCCEEEEEECCCCCCCCCCCCCEEEEECCCCCEEEECCCCCCCCCCCCCHHHCCHHH AVAIREAIAEGKPGSLSDGMQRLADAGRAGTMDIEDAWWMDVDDPRAHALAEELAPWHLA HHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCEEECCCCHHHHHHHHHHCHHHHH RTFAAIGQD HHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: dTTP; alpha-D-glucose 1-phosphate
Specific reaction: dTTP + alpha-D-glucose 1-phosphate = diphosphate + dTDP-glucose
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA