| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is 87198126
Identifier: 87198126
GI number: 87198126
Start: 102849
End: 103934
Strand: Direct
Name: 87198126
Synonym: Saro_0100
Alternate gene names: NA
Gene position: 102849-103934 (Clockwise)
Preceding gene: 87198124
Following gene: 87198127
Centisome position: 2.89
GC content: 67.4
Gene sequence:
>1086_bases GTGCGCGAGGCTCGCCTGGCGGGACTGGTGTCGTGCGAGGTCAACGGCGGCGCGGGATGGAACCCGACCGCCGCGACCCG CGCCGAAGCGGTGAGGCTGGGAGGACCGATGCCGGTCTCCTTCGCCGGTGGGAACACGTCCGTGCAAGGCCTGGTGGCGG TGATCCGTGGCGACGCCCTGCCGCCGGCCCAAGCCATCGCCGATGCAGTGGCAGGCCGCAACGAGCCGGTCGAAGGCGTG GAAATCACGTCAGGACCGGGAATCGACGAGGCGATCGCCCGCGCGGTTTCGGCTGGACGCGACGCGGCGGCGCGGCTTGA AGCCGCCGGGCGCGCAATCCTTCGCGGCACAGCCAAGCCGACTGACGGGATCGTCTCGCGGCACGTCAATCGCCCGCTGT CGCAGGCGATCTCGACCGTGGCGCTGCGTATCCCCGGCTTCCGGCCCGTCCACGCCACGATCGGCACCGCCGTCATTGCC ATGGCCATGTTCGCCTGCCTTCTGCTGGGTGGGGAAAGTGGCCTTGTCGCAGGCGCGCTGCTGTTCCAGGCGGCATCGAT CTTCGATGGCGTCGACGGGGAGGTTGCGCGGGCCACATGGCGCACTTCACCGGAAGGCGCGCGCATGGACAGCCTTATCG ACGCGGCGACGAACCTCGCCTTTCTGGCAGGTGTGGCATTCAACCTTCAGCTTCAGGGCCGCATCTTCGCTGCAAGTCTG GGGTACACAGGGCTCGCACTTCTCGCTATCGGGCTGTTCCTGATCGGACGCGCGGCGGCCCGCAGTAATGCCCCGTTCAG CTTCGATCTGGTCAAGGAACACTATCGGGCCAAGGGTGCGGCTGCGGATCGGACTGGCAGCCCTGTGGCCGGAAACAGCC CTTCCGGCGGTGGTGAGATCCGGGACACGAGGCCGTCGCAGATCATGCAATGGCTGACATTCATGACCAGCCGCGATTTT TTCGCGCTGGTGTTCGCTCTGTTGATCGCGGGAGGGCTTGCGGCGCTAGTCCTGGCCCTTTTTGCGATCGCGGCGGCGGG GTGGCTGGTTGCAGTCATCCTCGCCCTCGTGCCGAAGCAAGCTTGA
Upstream 100 bases:
>100_bases GAAAAGGGCATCGAGCATTTCAACATCGGGTCTCATCGTATTCGCAGCCGGACGGGATGCCGATCGGCTCGTCGCCGGCA TACCCGCGGCAGCCCGCGTC
Downstream 100 bases:
>100_bases CGACGGGGATTCTTCTTGCTTTTGGCGCGCGATTTGGAAATGAGGCTTAATCGTTACAGCCGCCCCCGGGCGCCTGTGTG AAGGGATCAGTATTCATGAA
Product: CDP-alcohol phosphatidyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 361; Mature: 361
Protein sequence:
>361_residues MREARLAGLVSCEVNGGAGWNPTAATRAEAVRLGGPMPVSFAGGNTSVQGLVAVIRGDALPPAQAIADAVAGRNEPVEGV EITSGPGIDEAIARAVSAGRDAAARLEAAGRAILRGTAKPTDGIVSRHVNRPLSQAISTVALRIPGFRPVHATIGTAVIA MAMFACLLLGGESGLVAGALLFQAASIFDGVDGEVARATWRTSPEGARMDSLIDAATNLAFLAGVAFNLQLQGRIFAASL GYTGLALLAIGLFLIGRAAARSNAPFSFDLVKEHYRAKGAAADRTGSPVAGNSPSGGGEIRDTRPSQIMQWLTFMTSRDF FALVFALLIAGGLAALVLALFAIAAAGWLVAVILALVPKQA
Sequences:
>Translated_361_residues MREARLAGLVSCEVNGGAGWNPTAATRAEAVRLGGPMPVSFAGGNTSVQGLVAVIRGDALPPAQAIADAVAGRNEPVEGV EITSGPGIDEAIARAVSAGRDAAARLEAAGRAILRGTAKPTDGIVSRHVNRPLSQAISTVALRIPGFRPVHATIGTAVIA MAMFACLLLGGESGLVAGALLFQAASIFDGVDGEVARATWRTSPEGARMDSLIDAATNLAFLAGVAFNLQLQGRIFAASL GYTGLALLAIGLFLIGRAAARSNAPFSFDLVKEHYRAKGAAADRTGSPVAGNSPSGGGEIRDTRPSQIMQWLTFMTSRDF FALVFALLIAGGLAALVLALFAIAAAGWLVAVILALVPKQA >Mature_361_residues MREARLAGLVSCEVNGGAGWNPTAATRAEAVRLGGPMPVSFAGGNTSVQGLVAVIRGDALPPAQAIADAVAGRNEPVEGV EITSGPGIDEAIARAVSAGRDAAARLEAAGRAILRGTAKPTDGIVSRHVNRPLSQAISTVALRIPGFRPVHATIGTAVIA MAMFACLLLGGESGLVAGALLFQAASIFDGVDGEVARATWRTSPEGARMDSLIDAATNLAFLAGVAFNLQLQGRIFAASL GYTGLALLAIGLFLIGRAAARSNAPFSFDLVKEHYRAKGAAADRTGSPVAGNSPSGGGEIRDTRPSQIMQWLTFMTSRDF FALVFALLIAGGLAALVLALFAIAAAGWLVAVILALVPKQA
Specific function: Unknown
COG id: COG0558
COG function: function code I; Phosphatidylglycerophosphate synthase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36816; Mature: 36816
Theoretical pI: Translated: 9.83; Mature: 9.83
Prosite motif: PS00379 CDP_ALCOHOL_P_TRANSF
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MREARLAGLVSCEVNGGAGWNPTAATRAEAVRLGGPMPVSFAGGNTSVQGLVAVIRGDAL CCCCHHEEEEEEEECCCCCCCCCHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHCCCC PPAQAIADAVAGRNEPVEGVEITSGPGIDEAIARAVSAGRDAAARLEAAGRAILRGTAKP CHHHHHHHHHHCCCCCCCCEEECCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCC TDGIVSRHVNRPLSQAISTVALRIPGFRPVHATIGTAVIAMAMFACLLLGGESGLVAGAL CHHHHHHHHCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH LFQAASIFDGVDGEVARATWRTSPEGARMDSLIDAATNLAFLAGVAFNLQLQGRIFAASL HHHHHHHHCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHEEEEECCEEEEECC GYTGLALLAIGLFLIGRAAARSNAPFSFDLVKEHYRAKGAAADRTGSPVAGNSPSGGGEI CHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC RDTRPSQIMQWLTFMTSRDFFALVFALLIAGGLAALVLALFAIAAAGWLVAVILALVPKQ CCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC A C >Mature Secondary Structure MREARLAGLVSCEVNGGAGWNPTAATRAEAVRLGGPMPVSFAGGNTSVQGLVAVIRGDAL CCCCHHEEEEEEEECCCCCCCCCHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHCCCC PPAQAIADAVAGRNEPVEGVEITSGPGIDEAIARAVSAGRDAAARLEAAGRAILRGTAKP CHHHHHHHHHHCCCCCCCCEEECCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCC TDGIVSRHVNRPLSQAISTVALRIPGFRPVHATIGTAVIAMAMFACLLLGGESGLVAGAL CHHHHHHHHCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH LFQAASIFDGVDGEVARATWRTSPEGARMDSLIDAATNLAFLAGVAFNLQLQGRIFAASL HHHHHHHHCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHEEEEECCEEEEECC GYTGLALLAIGLFLIGRAAARSNAPFSFDLVKEHYRAKGAAADRTGSPVAGNSPSGGGEI CHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC RDTRPSQIMQWLTFMTSRDFFALVFALLIAGGLAALVLALFAIAAAGWLVAVILALVPKQ CCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC A C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA