Definition Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome.
Accession NC_007794
Length 3,561,584

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The map label for this gene is 87198095

Identifier: 87198095

GI number: 87198095

Start: 71824

End: 72219

Strand: Direct

Name: 87198095

Synonym: Saro_0069

Alternate gene names: NA

Gene position: 71824-72219 (Clockwise)

Preceding gene: 87198094

Following gene: 87198096

Centisome position: 2.02

GC content: 67.93

Gene sequence:

>396_bases
TTGGCCACCGAAGCACCCGCCCTTTCCCCCTACGACCGCATCGGCGGCAGAGAAGTTCTGCGCCGCATCACCGACCGCTT
CTACGACCTCATGGACACGGACCCGGCCTATGCGGAACTGCGCGCGATGCACGCGCCGGATCTCTCGCCGATGCGGGAAG
CGCTTGCCGGCTTTCTGTCAGGCTGGTGCGGCGGCCCGCGAGGATGGTTCGAGGCCAATCCCGGCAAGTGCATGATGTCG
ATGCACAAGCCCTTCCCGATCACCCGCCAGACGGCCACGCAGTGGGCCGACTGTATGTCGCGCGCCATCGCCGACGCTGC
GCCGGAGGACACCGAGGTCGCCGACGCCATGGCGCAGGTTCTCGGCCAGATGGCCAAGGGCATGGCCCGCGACTGA

Upstream 100 bases:

>100_bases
TCGCGCGCGCTTCCCCGGAGCGATTGATCGCCGTCAATGCGTGTCGCGCGAAGGACGGGCAGGAACAAGGCTTCCGATCC
CTGTTCCCGGAGCTGATCCC

Downstream 100 bases:

>100_bases
CCTGCAAAGAAGGGTTTGGGCTTAAGGTCGCGTGCGCTAGGCTCTCCGCGTGATCCACTACGACCGCAACCGCCGCCGCT
TCGCCATCGCGCTCGCCGCA

Product: globin

Products: NA

Alternate protein names: Globin-Like Protein; Globin Family Protein; Hemoglobin-Like Protein; Hemoglobin Protein; Protozoan/Cyanobacterial Globin; Globin Family; Protozoan/Cyanobacterial Globin Family Protein; Hemoglobin-Like Protein HbO

Number of amino acids: Translated: 131; Mature: 130

Protein sequence:

>131_residues
MATEAPALSPYDRIGGREVLRRITDRFYDLMDTDPAYAELRAMHAPDLSPMREALAGFLSGWCGGPRGWFEANPGKCMMS
MHKPFPITRQTATQWADCMSRAIADAAPEDTEVADAMAQVLGQMAKGMARD

Sequences:

>Translated_131_residues
MATEAPALSPYDRIGGREVLRRITDRFYDLMDTDPAYAELRAMHAPDLSPMREALAGFLSGWCGGPRGWFEANPGKCMMS
MHKPFPITRQTATQWADCMSRAIADAAPEDTEVADAMAQVLGQMAKGMARD
>Mature_130_residues
ATEAPALSPYDRIGGREVLRRITDRFYDLMDTDPAYAELRAMHAPDLSPMREALAGFLSGWCGGPRGWFEANPGKCMMSM
HKPFPITRQTATQWADCMSRAIADAAPEDTEVADAMAQVLGQMAKGMARD

Specific function: Unknown

COG id: COG2346

COG function: function code R; Truncated hemoglobins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14414; Mature: 14282

Theoretical pI: Translated: 4.89; Mature: 4.89

Prosite motif: PS01213 GLOBIN_FAM_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
8.4 %Met     (Translated Protein)
10.7 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
7.7 %Met     (Mature Protein)
10.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATEAPALSPYDRIGGREVLRRITDRFYDLMDTDPAYAELRAMHAPDLSPMREALAGFLS
CCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHH
GWCGGPRGWFEANPGKCMMSMHKPFPITRQTATQWADCMSRAIADAAPEDTEVADAMAQV
HHCCCCCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
LGQMAKGMARD
HHHHHHHHCCC
>Mature Secondary Structure 
ATEAPALSPYDRIGGREVLRRITDRFYDLMDTDPAYAELRAMHAPDLSPMREALAGFLS
CCCCCCCCCHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHH
GWCGGPRGWFEANPGKCMMSMHKPFPITRQTATQWADCMSRAIADAAPEDTEVADAMAQV
HHCCCCCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
LGQMAKGMARD
HHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA