| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is 87198089
Identifier: 87198089
GI number: 87198089
Start: 64024
End: 64728
Strand: Direct
Name: 87198089
Synonym: Saro_0063
Alternate gene names: NA
Gene position: 64024-64728 (Clockwise)
Preceding gene: 87198088
Following gene: 87198092
Centisome position: 1.8
GC content: 67.38
Gene sequence:
>705_bases GTGAGCAACCAGCCCACGTATCCGCTGATGCCGCACGCGACCGCGTCGTGGCTCGTCGACAACACCGCGCTGACCTTCGA GCAGATCGCAGAGTTCTGCGGGCTGCACATCCTTGAAGTGCAGGCAATGGCCGACGATCTCGCGGGCCAGAAGTACACCG GTCGCGACCCGATCCATTCGGGCGAGCTGAACCAGGCCGAGATCGACAAGGGCCAGGCCAACCCCGACTACAAGCTGAAG ATGCAGCGCGCGCCGATCTCGGTCAGCCGCACCAAGGGTCCGCGCTATACCCCGGTGTCGAAGCGCCAGGACAAGCCCGA CGGCATCGCCTGGATCCTGCGCAACCATCCGGAAGTGTCGGACGCCCAGATCGGCAAGCTGATCGGCACCACCCGCACCA CGATCGCCGCCATCCGCGATCGCAGCCACTGGAACATCGGCAACATCAATCCGAAGGACCCGGTGACGCTGGGCCTTTGC TCGCAGCGTGAACTCGATGCGATGGTCGCCAAGGCCGCCAAGCGCGCCGGCATCGAGGACGACGGCCTTGCCGATTCGCG CCTCGGTTCGGACCGCGACGCGCTGATCGAGGAACTGCGCGCCGAGCGCGAGGCCCAGGCCAAGGCCGCATCGGAAGCAG CGCAGGAAGCCGAAGCCGCCGCGTGGCTGGCCGCGCGCCGCGCCGAGGGCATCTCGGACAGCTGA
Upstream 100 bases:
>100_bases CATTCGCGGCTTACATCAGCGCGGTTCAAGGCCGCTCCGCAAGGGGCGGCCCTTATTGTATCCGCTTTTCGCGGAAGCGC CTTTTTTCGGGAGATTGTCC
Downstream 100 bases:
>100_bases GTCTTCTTTCGGCCGAAAGCCGGAAAGAAAGGGCCGCCCTTCGCGACAGGGCGGCCTTTTTCGTGCCTAGCCCACCGCCA GCACGATCTTGCCGATATGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 234; Mature: 233
Protein sequence:
>234_residues MSNQPTYPLMPHATASWLVDNTALTFEQIAEFCGLHILEVQAMADDLAGQKYTGRDPIHSGELNQAEIDKGQANPDYKLK MQRAPISVSRTKGPRYTPVSKRQDKPDGIAWILRNHPEVSDAQIGKLIGTTRTTIAAIRDRSHWNIGNINPKDPVTLGLC SQRELDAMVAKAAKRAGIEDDGLADSRLGSDRDALIEELRAEREAQAKAASEAAQEAEAAAWLAARRAEGISDS
Sequences:
>Translated_234_residues MSNQPTYPLMPHATASWLVDNTALTFEQIAEFCGLHILEVQAMADDLAGQKYTGRDPIHSGELNQAEIDKGQANPDYKLK MQRAPISVSRTKGPRYTPVSKRQDKPDGIAWILRNHPEVSDAQIGKLIGTTRTTIAAIRDRSHWNIGNINPKDPVTLGLC SQRELDAMVAKAAKRAGIEDDGLADSRLGSDRDALIEELRAEREAQAKAASEAAQEAEAAAWLAARRAEGISDS >Mature_233_residues SNQPTYPLMPHATASWLVDNTALTFEQIAEFCGLHILEVQAMADDLAGQKYTGRDPIHSGELNQAEIDKGQANPDYKLKM QRAPISVSRTKGPRYTPVSKRQDKPDGIAWILRNHPEVSDAQIGKLIGTTRTTIAAIRDRSHWNIGNINPKDPVTLGLCS QRELDAMVAKAAKRAGIEDDGLADSRLGSDRDALIEELRAEREAQAKAASEAAQEAEAAAWLAARRAEGISDS
Specific function: Unknown
COG id: COG3820
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25522; Mature: 25391
Theoretical pI: Translated: 5.70; Mature: 5.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNQPTYPLMPHATASWLVDNTALTFEQIAEFCGLHILEVQAMADDLAGQKYTGRDPIHS CCCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCC GELNQAEIDKGQANPDYKLKMQRAPISVSRTKGPRYTPVSKRQDKPDGIAWILRNHPEVS CCCCHHHCCCCCCCCCEEEEEECCCCEEECCCCCCCCCCCCCCCCCCCEEEEECCCCCCC DAQIGKLIGTTRTTIAAIRDRSHWNIGNINPKDPVTLGLCSQRELDAMVAKAAKRAGIED HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHCCCCC DGLADSRLGSDRDALIEELRAEREAQAKAASEAAQEAEAAAWLAARRAEGISDS CCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure SNQPTYPLMPHATASWLVDNTALTFEQIAEFCGLHILEVQAMADDLAGQKYTGRDPIHS CCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCC GELNQAEIDKGQANPDYKLKMQRAPISVSRTKGPRYTPVSKRQDKPDGIAWILRNHPEVS CCCCHHHCCCCCCCCCEEEEEECCCCEEECCCCCCCCCCCCCCCCCCCEEEEECCCCCCC DAQIGKLIGTTRTTIAAIRDRSHWNIGNINPKDPVTLGLCSQRELDAMVAKAAKRAGIED HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHCCCCC DGLADSRLGSDRDALIEELRAEREAQAKAASEAAQEAEAAAWLAARRAEGISDS CCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA