| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is pnuC [H]
Identifier: 87198038
GI number: 87198038
Start: 9493
End: 10056
Strand: Direct
Name: pnuC [H]
Synonym: Saro_0012
Alternate gene names: 87198038
Gene position: 9493-10056 (Clockwise)
Preceding gene: 87198037
Following gene: 87198039
Centisome position: 0.27
GC content: 64.72
Gene sequence:
>564_bases GTGAACCCGGTCGAACTTGCGGCGAGCTTGCTCGGCCTTGCCAACATCGCGCTGCTGGTGCGGCGTTCGGTATGGAACTT CCCTTTCGCGCTGGGCTCAGTCTCCTGCACCGGCGTGGTGCTGTGGGAAGCTCGGCTCTATGCCGAAACCGGCCTGCAAG CGTTCTTCTTCGCGACCAACCTGTGGGGCTGGTGGCTCTGGGCCCAGGCACGCGGTGCAGAGGAAAGCGCGGTGCCAGTC CGATGGATGAGCATGCCGGAGCGGATGACCTGGTCAGGAGCGACAACAGTGCTGAGTCTTTCGCTCGGCTGGCTGCTCCA CCGTTTCACCAACGCCGCGCTGCCTTTTGCCGACTCCGCCGTGACCGGCGCCAGCATTGCCGCGCAGATTCTGCTCTCGC TGCGCAGGGTGGAGAACTGGGTCCTTTGGGTGGCGATCGACGTGGTCGGCATCGGGCTCTACCTGGCTCGTGGACTTCCG CTCCTCGCGACACTGTACGCGGTGTTCCTCGTGCTGTCGGTGCTGGGCTTGCGCCAATGGACCAAGGCCGCACGATCATG CTGA
Upstream 100 bases:
>100_bases GCCGAGCATGCCTCGGTCATCAAGCGTCCGGTCGTCGAGCATCCGGGCGGGCTCCTTGTCGGCTTCAAGGAAGCGGAGTG GGCGGCGGCGCTCGCCTGAC
Downstream 100 bases:
>100_bases GAGTGTGTTTCCACGGGGCCGAAAGTACCGGAAAATCGGTGCTGGCTGCACGGCTGCACCACCGCTTCGGCTGGCCATGG GTTCCCGAATACGGCCGCGA
Product: nicotinamide mononucleotide transporter
Products: nicotinamide nucleotide [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 187; Mature: 187
Protein sequence:
>187_residues MNPVELAASLLGLANIALLVRRSVWNFPFALGSVSCTGVVLWEARLYAETGLQAFFFATNLWGWWLWAQARGAEESAVPV RWMSMPERMTWSGATTVLSLSLGWLLHRFTNAALPFADSAVTGASIAAQILLSLRRVENWVLWVAIDVVGIGLYLARGLP LLATLYAVFLVLSVLGLRQWTKAARSC
Sequences:
>Translated_187_residues MNPVELAASLLGLANIALLVRRSVWNFPFALGSVSCTGVVLWEARLYAETGLQAFFFATNLWGWWLWAQARGAEESAVPV RWMSMPERMTWSGATTVLSLSLGWLLHRFTNAALPFADSAVTGASIAAQILLSLRRVENWVLWVAIDVVGIGLYLARGLP LLATLYAVFLVLSVLGLRQWTKAARSC >Mature_187_residues MNPVELAASLLGLANIALLVRRSVWNFPFALGSVSCTGVVLWEARLYAETGLQAFFFATNLWGWWLWAQARGAEESAVPV RWMSMPERMTWSGATTVLSLSLGWLLHRFTNAALPFADSAVTGASIAAQILLSLRRVENWVLWVAIDVVGIGLYLARGLP LLATLYAVFLVLSVLGLRQWTKAARSC
Specific function: Required for nicotinamide riboside transport across the inner membrane [H]
COG id: COG3201
COG function: function code H; Nicotinamide mononucleotide transporter
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the nicotinamide ribonucleoside (NR) uptake permease (TC 4.B.1) family [H]
Homologues:
Organism=Escherichia coli, GI1786965, Length=207, Percent_Identity=28.5024154589372, Blast_Score=93, Evalue=9e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006419 [H]
Pfam domain/function: PF04973 NMN_transporter [H]
EC number: NA
Molecular weight: Translated: 20566; Mature: 20566
Theoretical pI: Translated: 9.82; Mature: 9.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNPVELAASLLGLANIALLVRRSVWNFPFALGSVSCTGVVLWEARLYAETGLQAFFFATN CCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCEEEEHHHHHHHHHCHHHHHHHHH LWGWWLWAQARGAEESAVPVRWMSMPERMTWSGATTVLSLSLGWLLHRFTNAALPFADSA HHHHHHHHHHCCCCCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCH VTGASIAAQILLSLRRVENWVLWVAIDVVGIGLYLARGLPLLATLYAVFLVLSVLGLRQW HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH TKAARSC HHHHHCC >Mature Secondary Structure MNPVELAASLLGLANIALLVRRSVWNFPFALGSVSCTGVVLWEARLYAETGLQAFFFATN CCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCEEEEHHHHHHHHHCHHHHHHHHH LWGWWLWAQARGAEESAVPVRWMSMPERMTWSGATTVLSLSLGWLLHRFTNAALPFADSA HHHHHHHHHHCCCCCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCH VTGASIAAQILLSLRRVENWVLWVAIDVVGIGLYLARGLPLLATLYAVFLVLSVLGLRQW HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH TKAARSC HHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: nicotinamide nucleotide [Periplasm] [C]
Specific reaction: nicotinamide nucleotide [Periplasm] = nicotinamide nucleotide [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8905232; 9278503; 2841129; 2198247 [H]