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The map label for this gene is yhfN [H]

Identifier: 87198031

GI number: 87198031

Start: 3946

End: 5124

Strand: Direct

Name: yhfN [H]

Synonym: Saro_0005

Alternate gene names: 87198031

Gene position: 3946-5124 (Clockwise)

Preceding gene: 87198030

Following gene: 87198032

Centisome position: 0.11

GC content: 67.09

Gene sequence:

>1179_bases
ATGGCACTCGATCCTGCAACCGAAGCGGCGCGGCTGGTAGACAGTCTTGGCGCCGAGCAACTGGCGCTGGCGGCGTCCTA
CACGCGTGGCAACGAATGGCTGACCGTGGCCGGCGTAGCCATATCGCTGGTGCTAGCGTGGATCATCGTGCGCCTGCGTG
TGCTGGACTGGCTGGCGGCCAGGGTCGCCCGCTGGCCGCGCGTAGCGGCGACATTCACGGTATCCTTCGGCTTCTTCCTG
ATCGCCGACGTGCTGCGCCTGCCCGTCACCGTCTGGACCGACTGGTGGCGCGAAAAGTCCTACGACATGACCGACCAGCC
GCTGGGCGATTTCCTGTTCCAGTACGCGCTCGCCGGAGTGATCGAGTTCGCGATAAGCGCGATCTTCGTGGTGGGCGTGT
TCTGGCTGGTGCGGCGATCGCCGCGCCGCTGGTGGCTGTGGACGGGCGGACTGGCCGGAGGCGGAGCGGCGGCGTTGCTA
CTGCTTGGCCCGGCGTTGATCCAGCCGATGTTCAACACCTTCCAGCCAGTGCCTCCGGGGCAGGTGCGCACCGCGCTCGA
GGCGATTGCGGATGACGTTGGCATCCCGCACGACCGCATCTTCATGTACGACGGCTCCCGCCAGTCAGCCAACTTCACCG
CGAACGTGTCGGGCATCGGCCCTGCGGCCCGGATCGCTATTGCCGACGTCGCGCTCAAGTCCGCCTCGCTCGACGAAGTG
CGCGCCGTGACCGCGCACGAGGCGGGACACTACAAGCTGGGCCACGTCTGGCGGCACCTCGTTGTCATGCCGCTGATCGC
GGTGCTGGTGGCATTCCTCATCGGCCGACTCTACCCGTGGACGGCGCAAAGGCTGGGCGCCACGGCGCCGCTGGGCGATC
CTGTGGGGCTGCCGGTGTTCATGGCGCTCGTATCTGTCCTGACGCTGTTCACCCTGCCCGCGGTCAACAGCCTCACCCGC
ATGGGCGAGGCAGAGGCCGACGCCTTTGCCATGCAGACAGTGGGCCTGCCCGACGCCATGGCGGGAGCCTTGCTCAAGAC
CGCCGAATACCGCTATCCCCGGCCACATCCGCTGGAGGAAGCGATCTTCTATACCCACCCTTCGGTCGAACGTCGCATCG
AGGCGGCGATGGCCTGGAAGGCAGGGCGTGGCGGTGCGAACATGACCGGGGTCCAATGA

Upstream 100 bases:

>100_bases
AGCCGGGTCGCTACACGATGCCCGAAGTCCTCGGCCTCTGACCCAATTGCCAATTCCGATCCGTACTGTACTATTTCAGT
AATACAGTACGGGAGGAACC

Downstream 100 bases:

>100_bases
CGCGCGACCAGATATTCGAGTTCTTCCGCCGACTTGCCGAGGCAAACCCCTCGCCCGAGACCGAGCTGGAGTTCGGCAAC
GTCTACCAGTTGCTGGTCGC

Product: peptidase M48, Ste24p

Products: NA

Alternate protein names: PSP23 [H]

Number of amino acids: Translated: 392; Mature: 391

Protein sequence:

>392_residues
MALDPATEAARLVDSLGAEQLALAASYTRGNEWLTVAGVAISLVLAWIIVRLRVLDWLAARVARWPRVAATFTVSFGFFL
IADVLRLPVTVWTDWWREKSYDMTDQPLGDFLFQYALAGVIEFAISAIFVVGVFWLVRRSPRRWWLWTGGLAGGGAAALL
LLGPALIQPMFNTFQPVPPGQVRTALEAIADDVGIPHDRIFMYDGSRQSANFTANVSGIGPAARIAIADVALKSASLDEV
RAVTAHEAGHYKLGHVWRHLVVMPLIAVLVAFLIGRLYPWTAQRLGATAPLGDPVGLPVFMALVSVLTLFTLPAVNSLTR
MGEAEADAFAMQTVGLPDAMAGALLKTAEYRYPRPHPLEEAIFYTHPSVERRIEAAMAWKAGRGGANMTGVQ

Sequences:

>Translated_392_residues
MALDPATEAARLVDSLGAEQLALAASYTRGNEWLTVAGVAISLVLAWIIVRLRVLDWLAARVARWPRVAATFTVSFGFFL
IADVLRLPVTVWTDWWREKSYDMTDQPLGDFLFQYALAGVIEFAISAIFVVGVFWLVRRSPRRWWLWTGGLAGGGAAALL
LLGPALIQPMFNTFQPVPPGQVRTALEAIADDVGIPHDRIFMYDGSRQSANFTANVSGIGPAARIAIADVALKSASLDEV
RAVTAHEAGHYKLGHVWRHLVVMPLIAVLVAFLIGRLYPWTAQRLGATAPLGDPVGLPVFMALVSVLTLFTLPAVNSLTR
MGEAEADAFAMQTVGLPDAMAGALLKTAEYRYPRPHPLEEAIFYTHPSVERRIEAAMAWKAGRGGANMTGVQ
>Mature_391_residues
ALDPATEAARLVDSLGAEQLALAASYTRGNEWLTVAGVAISLVLAWIIVRLRVLDWLAARVARWPRVAATFTVSFGFFLI
ADVLRLPVTVWTDWWREKSYDMTDQPLGDFLFQYALAGVIEFAISAIFVVGVFWLVRRSPRRWWLWTGGLAGGGAAALLL
LGPALIQPMFNTFQPVPPGQVRTALEAIADDVGIPHDRIFMYDGSRQSANFTANVSGIGPAARIAIADVALKSASLDEVR
AVTAHEAGHYKLGHVWRHLVVMPLIAVLVAFLIGRLYPWTAQRLGATAPLGDPVGLPVFMALVSVLTLFTLPAVNSLTRM
GEAEADAFAMQTVGLPDAMAGALLKTAEYRYPRPHPLEEAIFYTHPSVERRIEAAMAWKAGRGGANMTGVQ

Specific function: Unknown

COG id: COG0501

COG function: function code O; Zn-dependent protease with chaperone function

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M48B family [H]

Homologues:

Organism=Caenorhabditis elegans, GI17505484, Length=336, Percent_Identity=23.5119047619048, Blast_Score=89, Evalue=4e-18,
Organism=Saccharomyces cerevisiae, GI6322577, Length=231, Percent_Identity=30.3030303030303, Blast_Score=108, Evalue=1e-24,
Organism=Drosophila melanogaster, GI19922414, Length=335, Percent_Identity=24.7761194029851, Blast_Score=100, Evalue=3e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001915 [H]

Pfam domain/function: PF01435 Peptidase_M48 [H]

EC number: NA

Molecular weight: Translated: 42642; Mature: 42511

Theoretical pI: Translated: 7.94; Mature: 7.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALDPATEAARLVDSLGAEQLALAASYTRGNEWLTVAGVAISLVLAWIIVRLRVLDWLAA
CCCCCHHHHHHHHHHHCHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHH
RVARWPRVAATFTVSFGFFLIADVLRLPVTVWTDWWREKSYDMTDQPLGDFLFQYALAGV
HHHHCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHH
IEFAISAIFVVGVFWLVRRSPRRWWLWTGGLAGGGAAALLLLGPALIQPMFNTFQPVPPG
HHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCH
QVRTALEAIADDVGIPHDRIFMYDGSRQSANFTANVSGIGPAARIAIADVALKSASLDEV
HHHHHHHHHHHHCCCCCCEEEEECCCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCHHHH
RAVTAHEAGHYKLGHVWRHLVVMPLIAVLVAFLIGRLYPWTAQRLGATAPLGDPVGLPVF
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCHHHH
MALVSVLTLFTLPAVNSLTRMGEAEADAFAMQTVGLPDAMAGALLKTAEYRYPRPHPLEE
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCHHH
AIFYTHPSVERRIEAAMAWKAGRGGANMTGVQ
HHEECCCHHHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure 
ALDPATEAARLVDSLGAEQLALAASYTRGNEWLTVAGVAISLVLAWIIVRLRVLDWLAA
CCCCHHHHHHHHHHHCHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHH
RVARWPRVAATFTVSFGFFLIADVLRLPVTVWTDWWREKSYDMTDQPLGDFLFQYALAGV
HHHHCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHH
IEFAISAIFVVGVFWLVRRSPRRWWLWTGGLAGGGAAALLLLGPALIQPMFNTFQPVPPG
HHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCH
QVRTALEAIADDVGIPHDRIFMYDGSRQSANFTANVSGIGPAARIAIADVALKSASLDEV
HHHHHHHHHHHHCCCCCCEEEEECCCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCHHHH
RAVTAHEAGHYKLGHVWRHLVVMPLIAVLVAFLIGRLYPWTAQRLGATAPLGDPVGLPVF
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCHHHH
MALVSVLTLFTLPAVNSLTRMGEAEADAFAMQTVGLPDAMAGALLKTAEYRYPRPHPLEE
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCHHH
AIFYTHPSVERRIEAAMAWKAGRGGANMTGVQ
HHEECCCHHHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9579061; 9384377; 3145906 [H]