Click here to switch to the map view.

The map label for this gene is topA

Identifier: 87161325

GI number:

Start: 1252764

End: 1254839

Strand: Direct

Name: topA

Synonym: SAUSA300_1143

Alternate gene names: NA

Gene position: NA

Preceding gene: 87160701

Following gene: 87161842

Centisome position: NA

GC content: NA

Gene sequence:

>2076_bases
ATGACATTGGCAGATAATTTAGTCATTGTTGAATCGCCTGCAAAAGCAAAAACCATTGAAAAGTATTTAGGTAAGAAATA
TAAAGTTATAGCTTCAATGGGACACGTCAGAGACTTACCAAGAAGTCAAATGGGTGTCGACACTGAAGATAATTACGAAC
CAAAATATATAACAATACGCGGAAAAGGTCCTGTTGTAAAAGAATTGAAAAAACATGCAAAAAAAGCGAAAAACGTCTTT
CTCGCAAGTGACCCCGACCGTGAAGGTGAAGCAATTGCTTGGCATTTATCAAAAATTTTAGAGCTTGAAGATTCTAAAGA
AAATCGCGTTGTTTTCAACGAAATAACTAAAGACGCTGTTAAAGAAAGTTTTAAAAATCCTAGAGAAATTGAAATGAACT
TAGTCGATGCACAACAAGCGCGTCGAATATTAGATAGATTAGTTGGCTATAACATCTCGCCAGTTCTTTGGAAAAAAGTA
AAAAAAGGGTTGTCAGCGGGTCGAGTTCAATCTGTTGCACTTCGTTTAGTCATTGACCGTGAAAATGAAATTCGAAACTT
TAAACCAGAAGAATATTGGACTATTGAAGGAGAATTTAGATACAAAAAATCAAAATTCAATGCTAAATTCCTTCATTATA
AAAATAAACCTTTTAAACTAAAAACGAAAAAAGATGTTGAGAAAATTACAGCTGCATTAGATGGAGATCAATTCGAAATT
ACAAACGTGACTAAAAAAGAAAAAACGCGTAATCCAGCAAACCCATTTACAACTTCTACATTACAACAAGAGGCGGCACG
TAAATTAAACTTTAAAGCAAGAAAAACAATGATGGTCGCACAACAATTATATGAAGGTATAGATTTGAAAAAACAAGGTA
CGATTGGTTTAATAACATATATGAGAACCGATTCTACACGTATTTCAGATACTGCCAAAGTTGAAGCAAAACAGTATATA
ACTGATAAATACGGTGAATCTTACACTTCTAAACGTAAAGCATCAGGGAAACAAGGTGACCAAGATGCCCATGAGGCTAT
TAGACCTTCAAGTACTATGCGTACGCCAGATGATATGAAGTCATTTTTGACGAAAGACCAATACCGATTATACAAATTAA
TTTGGGAACGATTTGTTGCTAGTCAAATGGCTCCAGCAATACTTGATACAGTCTCATTAGACATAACACAAGGTGACATT
AAATTTAGAGCGAATGGTCAAACAATCAAGTTTAAAGGATTTATGACACTTTATGTAGAAACTAAAGATGATAGTGATAG
CGAAAAGGAAAATAAACTGCCTAAATTAGAGCAAGGTGATAAAGTCACAGCAACTCAAATTGAACCAGCTCAACACTATA
CACAACCACCTCCAAGATATACTGAGGCGAGATTAGTAAAAACACTAGAAGAATTGAAAATTGGGCGACCATCAACTTAT
GCACCGACAATAGATACGATTCAAAAGCGTAACTATGTCAAATTAGAAAGTAAGCGTTTTGTTCCTACTGAGTTGGGAGA
AATAGTTCATGAACAAGTGAAAGAATACTTCCCAGAGATTATTGATGTGGAATTCACAGTGAATATGGAAACGTTACTTG
ATAAGATTGCAGAAGGCGACATTACATGGAGGAAAGTAATCGACGGTTTCTTTAGTAGCTTTAAACAAGATGTTGAACGT
GCTGAAGAAGAGATGGAAAAGATTGAAATCAAAGATGAGCCAGCCGGTGAAGACTGTGAAATTTGTGGTTCTCCTATGGT
TATAAAAATGGGACGCTATGGTAAGTTCATGGCTTGCTCAAACTTCCCGGATTGTCGTAATACAAAAGCGATAGTTAAGT
CTATTGGTGTTAAATGTCCAAAATGTAATGATGGTGACGTCGTAGAAAGAAAATCTAAAAAGAATCGTGTCTTTTATGGA
TGTTCGAAATATCCTGAATGCGACTTTATCTCTTGGGATAAGCCGATTGGAAGAGATTGTCCAAAATGTAACCAATATCT
TGTTGAAAATAAAAAAGGCAAGACAACACAAGTAATATGTTCAAATTGCGATTATAAAGAGGCAGCGCAGAAATAA

Upstream 100 bases:

>100_bases
AAATAGACAGGGAAAATGATTTGTTTAGATATAAAACGTTGACAAAAGCAAAATTAAGCGTTTATCATTTATCTTTAGTA
ATTAGATTAGCGAGGGGGAA

Downstream 100 bases:

>100_bases
TATTTTTATTTCCTAGATACATTTTAAGATTGTTAAATAGAATCATTAGTGAATCTTATTTTAAAGATAGTAAAGGATTA
ATCTAAATAAGTGCGGATAA

Product: DNA topoisomerase I

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>691_residues
MTLADNLVIVESPAKAKTIEKYLGKKYKVIASMGHVRDLPRSQMGVDTEDNYEPKYITIRGKGPVVKELKKHAKKAKNVF
LASDPDREGEAIAWHLSKILELEDSKENRVVFNEITKDAVKESFKNPREIEMNLVDAQQARRILDRLVGYNISPVLWKKV
KKGLSAGRVQSVALRLVIDRENEIRNFKPEEYWTIEGEFRYKKSKFNAKFLHYKNKPFKLKTKKDVEKITAALDGDQFEI
TNVTKKEKTRNPANPFTTSTLQQEAARKLNFKARKTMMVAQQLYEGIDLKKQGTIGLITYMRTDSTRISDTAKVEAKQYI
TDKYGESYTSKRKASGKQGDQDAHEAIRPSSTMRTPDDMKSFLTKDQYRLYKLIWERFVASQMAPAILDTVSLDITQGDI
KFRANGQTIKFKGFMTLYVETKDDSDSEKENKLPKLEQGDKVTATQIEPAQHYTQPPPRYTEARLVKTLEELKIGRPSTY
APTIDTIQKRNYVKLESKRFVPTELGEIVHEQVKEYFPEIIDVEFTVNMETLLDKIAEGDITWRKVIDGFFSSFKQDVER
AEEEMEKIEIKDEPAGEDCEICGSPMVIKMGRYGKFMACSNFPDCRNTKAIVKSIGVKCPKCNDGDVVERKSKKNRVFYG
CSKYPECDFISWDKPIGRDCPKCNQYLVENKKGKTTQVICSNCDYKEAAQK

Sequences:
NA

Specific function: NA

COG id: COG0550

COG function: function code L; Topoisomerase IA

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA