Definition Rhodopseudomonas palustris HaA2, complete genome.
Accession NC_007778
Length 5,331,656

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The map label for this gene is 86751780

Identifier: 86751780

GI number: 86751780

Start: 5297442

End: 5297741

Strand: Direct

Name: 86751780

Synonym: RPB_4682

Alternate gene names: NA

Gene position: 5297442-5297741 (Clockwise)

Preceding gene: 86751779

Following gene: 86751781

Centisome position: 99.36

GC content: 75.67

Gene sequence:

>300_bases
ATGACGAACGACGACAATTCCCGCACCGCCGCACGCGCCGGCGCACAGGAGACCGCCAACGCACTGGCCGAGCGCGAAGC
CGCGGCCAAGGCGGCGCGCGACAACATGGCCCGGCTGCGCGCGCTGCGACTGGCCCGCGAGGCCGCCGAACCGCAGCGCA
GCGCGCCGGCCAAGGCCAAGCGCAGCGCCGCTGGCGGCAAGACCGCCGCCGCACGAACCACGAGCCGGAAGGCCGACGAC
AAGCCGCGGCCGCTGTCCGAATGGCTGGCCGAGCAGCAGAGCGGCGGCCGCCGGACCTGA

Upstream 100 bases:

>100_bases
GGCCCCGGCAGCAAAGGCTGTTCCGGGGCCTTTTTCGTGCTACACCCCGCCCTTCCCAATCCACGACCTTTCCATTCCAA
GACAATCAACGACTGGACGA

Downstream 100 bases:

>100_bases
CGCAATCTCGGCCCGGCGCGTTGCGACGGGCTGGTTTGCGCAAAATGCTGCAAACCCCCGCCTGATCCTCGACTAGACTG
CCGCCGTTGGCTGGCGGCTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 99; Mature: 98

Protein sequence:

>99_residues
MTNDDNSRTAARAGAQETANALAEREAAAKAARDNMARLRALRLAREAAEPQRSAPAKAKRSAAGGKTAAARTTSRKADD
KPRPLSEWLAEQQSGGRRT

Sequences:

>Translated_99_residues
MTNDDNSRTAARAGAQETANALAEREAAAKAARDNMARLRALRLAREAAEPQRSAPAKAKRSAAGGKTAAARTTSRKADD
KPRPLSEWLAEQQSGGRRT
>Mature_98_residues
TNDDNSRTAARAGAQETANALAEREAAAKAARDNMARLRALRLAREAAEPQRSAPAKAKRSAAGGKTAAARTTSRKADDK
PRPLSEWLAEQQSGGRRT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10529; Mature: 10398

Theoretical pI: Translated: 11.81; Mature: 11.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTNDDNSRTAARAGAQETANALAEREAAAKAARDNMARLRALRLAREAAEPQRSAPAKAK
CCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH
RSAAGGKTAAARTTSRKADDKPRPLSEWLAEQQSGGRRT
HHHCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCC
>Mature Secondary Structure 
TNDDNSRTAARAGAQETANALAEREAAAKAARDNMARLRALRLAREAAEPQRSAPAKAK
CCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH
RSAAGGKTAAARTTSRKADDKPRPLSEWLAEQQSGGRRT
HHHCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA