| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is 86751780
Identifier: 86751780
GI number: 86751780
Start: 5297442
End: 5297741
Strand: Direct
Name: 86751780
Synonym: RPB_4682
Alternate gene names: NA
Gene position: 5297442-5297741 (Clockwise)
Preceding gene: 86751779
Following gene: 86751781
Centisome position: 99.36
GC content: 75.67
Gene sequence:
>300_bases ATGACGAACGACGACAATTCCCGCACCGCCGCACGCGCCGGCGCACAGGAGACCGCCAACGCACTGGCCGAGCGCGAAGC CGCGGCCAAGGCGGCGCGCGACAACATGGCCCGGCTGCGCGCGCTGCGACTGGCCCGCGAGGCCGCCGAACCGCAGCGCA GCGCGCCGGCCAAGGCCAAGCGCAGCGCCGCTGGCGGCAAGACCGCCGCCGCACGAACCACGAGCCGGAAGGCCGACGAC AAGCCGCGGCCGCTGTCCGAATGGCTGGCCGAGCAGCAGAGCGGCGGCCGCCGGACCTGA
Upstream 100 bases:
>100_bases GGCCCCGGCAGCAAAGGCTGTTCCGGGGCCTTTTTCGTGCTACACCCCGCCCTTCCCAATCCACGACCTTTCCATTCCAA GACAATCAACGACTGGACGA
Downstream 100 bases:
>100_bases CGCAATCTCGGCCCGGCGCGTTGCGACGGGCTGGTTTGCGCAAAATGCTGCAAACCCCCGCCTGATCCTCGACTAGACTG CCGCCGTTGGCTGGCGGCTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 99; Mature: 98
Protein sequence:
>99_residues MTNDDNSRTAARAGAQETANALAEREAAAKAARDNMARLRALRLAREAAEPQRSAPAKAKRSAAGGKTAAARTTSRKADD KPRPLSEWLAEQQSGGRRT
Sequences:
>Translated_99_residues MTNDDNSRTAARAGAQETANALAEREAAAKAARDNMARLRALRLAREAAEPQRSAPAKAKRSAAGGKTAAARTTSRKADD KPRPLSEWLAEQQSGGRRT >Mature_98_residues TNDDNSRTAARAGAQETANALAEREAAAKAARDNMARLRALRLAREAAEPQRSAPAKAKRSAAGGKTAAARTTSRKADDK PRPLSEWLAEQQSGGRRT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10529; Mature: 10398
Theoretical pI: Translated: 11.81; Mature: 11.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNDDNSRTAARAGAQETANALAEREAAAKAARDNMARLRALRLAREAAEPQRSAPAKAK CCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH RSAAGGKTAAARTTSRKADDKPRPLSEWLAEQQSGGRRT HHHCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCC >Mature Secondary Structure TNDDNSRTAARAGAQETANALAEREAAAKAARDNMARLRALRLAREAAEPQRSAPAKAK CCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH RSAAGGKTAAARTTSRKADDKPRPLSEWLAEQQSGGRRT HHHCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA