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The map label for this gene is atpF

Identifier: 86751672

GI number: 86751672

Start: 5171182

End: 5171673

Strand: Direct

Name: atpF

Synonym: RPB_4574

Alternate gene names: 86751672

Gene position: 5171182-5171673 (Clockwise)

Preceding gene: 86751671

Following gene: 86751687

Centisome position: 96.99

GC content: 67.48

Gene sequence:

>492_bases
ATGGCAATCTTCGCTGAAGCAGAAACCTGGGTCGCGATCGCATTCGTGATCCTGATGGGCATCTTCGCGTATCTCGGTGT
CCACCGCACCGTCTTGAAGGCGCTGGACAATCGTCGCGACCGGATCAAGGCCGAGCTCGACGAGGCCCGCAAGCTCAAAG
ACGAAGCCGCCAAGCTGCTCGCCGACTATCGCGCGCGCCGGGCTCAGGCGGAACGCGAGGCCGAGGCGATCGTCGCCAGC
GCCAAGGCCGACGCCGAACGCATCGCGGCCGAGTCCAAGGCCAAGCTGGAGGACTTCGTCGTCCGCCGCACCAAGACCGC
GGAGAGCAAGATCGCGCTGGCGGAGGCTCAGGCCCTCGCCGATGTGCGGGCCGCAGCGGCCGAGGCCGCCGTGTCCGCCG
CCGCGATCGTCCTGTCGCAGTCGGTCAAGGGCCAGGTCGCCGACGACCTGCTCGGCAAGGGCATCCAGGAAGTCCGCAGC
AAGCTCAACTGA

Upstream 100 bases:

>100_bases
CCGAGGCGGCCGCTGCGATCGTTCAGCAGCTCGCCGGCGTCCAGCCGGACAGCAAGGCGCTGGATAGCGCGGTCAACGCT
TCGATAAAGGGCTGAGGCCG

Downstream 100 bases:

>100_bases
GCGGCGCTTCTCGACAACATTCAAAAAGCCGGCGCGAGCAATCGCGCCGGCTTTTTCGTGTGTGCTTTCACCTGGGGACG
CGCACGGCGCAACCTCTCCC

Product: H+-transporting two-sector ATPase, B/B' subunit

Products: ADP; phosphate; H+

Alternate protein names: ATP synthase F(0) sector subunit b; ATPase subunit I; F-type ATPase subunit b; F-ATPase subunit b

Number of amino acids: Translated: 163; Mature: 162

Protein sequence:

>163_residues
MAIFAEAETWVAIAFVILMGIFAYLGVHRTVLKALDNRRDRIKAELDEARKLKDEAAKLLADYRARRAQAEREAEAIVAS
AKADAERIAAESKAKLEDFVVRRTKTAESKIALAEAQALADVRAAAAEAAVSAAAIVLSQSVKGQVADDLLGKGIQEVRS
KLN

Sequences:

>Translated_163_residues
MAIFAEAETWVAIAFVILMGIFAYLGVHRTVLKALDNRRDRIKAELDEARKLKDEAAKLLADYRARRAQAEREAEAIVAS
AKADAERIAAESKAKLEDFVVRRTKTAESKIALAEAQALADVRAAAAEAAVSAAAIVLSQSVKGQVADDLLGKGIQEVRS
KLN
>Mature_162_residues
AIFAEAETWVAIAFVILMGIFAYLGVHRTVLKALDNRRDRIKAELDEARKLKDEAAKLLADYRARRAQAEREAEAIVASA
KADAERIAAESKAKLEDFVVRRTKTAESKIALAEAQALADVRAAAAEAAVSAAAIVLSQSVKGQVADDLLGKGIQEVRSK
LN

Specific function: Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)

COG id: COG0711

COG function: function code C; F0F1-type ATP synthase, subunit b

Gene ontology:

Cell location: Cell inner membrane; Single-pass membrane protein

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATPase B chain family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): ATPF_RHOP2 (Q2IRA3)

Other databases:

- EMBL:   CP000250
- RefSeq:   YP_488168.1
- STRING:   Q2IRA3
- GeneID:   3912391
- GenomeReviews:   CP000250_GR
- KEGG:   rpb:RPB_4574
- eggNOG:   COG0711
- HOGENOM:   HBG692690
- OMA:   KTEEFVA
- ProtClustDB:   CLSK818463
- BioCyc:   RPAL316058:RPB_4574-MONOMER
- HAMAP:   MF_01398
- InterPro:   IPR002146

Pfam domain/function: PF00430 ATP-synt_B

EC number: 3.6.3.14

Molecular weight: Translated: 17588; Mature: 17457

Theoretical pI: Translated: 9.53; Mature: 9.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x21b19114)-;

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
0.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAIFAEAETWVAIAFVILMGIFAYLGVHRTVLKALDNRRDRIKAELDEARKLKDEAAKLL
CCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ADYRARRAQAEREAEAIVASAKADAERIAAESKAKLEDFVVRRTKTAESKIALAEAQALA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DVRAAAAEAAVSAAAIVLSQSVKGQVADDLLGKGIQEVRSKLN
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCH
>Mature Secondary Structure 
AIFAEAETWVAIAFVILMGIFAYLGVHRTVLKALDNRRDRIKAELDEARKLKDEAAKLL
CEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ADYRARRAQAEREAEAIVASAKADAERIAAESKAKLEDFVVRRTKTAESKIALAEAQALA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DVRAAAAEAAVSAAAIVLSQSVKGQVADDLLGKGIQEVRSKLN
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; H2O; H+

Specific reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out)

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA