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The map label for this gene is yrbH [C]

Identifier: 86751637

GI number: 86751637

Start: 5133173

End: 5134183

Strand: Direct

Name: yrbH [C]

Synonym: RPB_4539

Alternate gene names: 86751637

Gene position: 5133173-5134183 (Clockwise)

Preceding gene: 86751635

Following gene: 86751644

Centisome position: 96.28

GC content: 67.06

Gene sequence:

>1011_bases
ATGGCGCTTTCAAAACCCCGTACGACAAAACCCGCGATGACAGATTCAGCCGCCGCGATCCCCTCGGCCCTGCGCACGCT
GGAGGCCGAAGCCGACGGCGTCACCGCGCTCGCCGCAGCGCTGCGATCCGACCTCGGCAGCGCCTTCGCGGCGGCGATCG
AGACCATCCGCAACGCCAAGGGCCGGCTGATCATCACCGGGCTCGGCAAATCCGGACATATCGGCCGCAAGATCGCCGCG
ACCTTCGCCTCGACCGGCACGCCGGCGTTCTTCGTCCACGCCTCCGAAGCCAGCCACGGTGATCTCGGCATGATCACCGC
CGACGACATTATTCTCGCGATGTCGTGGTCCGGCGAGCAGCCGGAAATGAAGAACCTGATCTCTTACGCCAAGCGGTTCA
GGATCGCGCTGATCGCGATGACCTCCGACTCGGGCTCGACGCTGGCCAAGGCCGCGGATATCTCGCTGACGCTGCCGAAG
GCGCGCGAGGCCTGCCCGCACAATCTGGCGCCGACCACCTCGTCGCTGATGATGCTGGCGCTCGGCGACGCGATCGCGAT
CGCGCTGCTGGAGAGCCGCGGCTTCACCTCGACCGATTTCAGCGTGCTGCATCCCGGCGGCAAACTCGGCGCGATGCTGA
AATACGCCCGCGACCTGATGCACACCGGTGACGCCGTGCCGCTGAAGCCGCTCGGCACCAAGATGTCGGATGCACTGGTC
GAGATGTCGGCCAAGGGCTTCGGCTGCGTCGGCATCGTCGACGCCAGCGGCGCCGTCGCCGGCATCGTCACCGACGGCGA
TCTGCGCCGCCACATGCGCCCCGATCTGATGACCGCGACCGTCGACGAGGTGATGACCAAGCGGCCGAAGACGATCAGCC
CCGGCCTGCTCGCCGGCGAGACGCTGGAATTGCTGAACTCCTCGAAGATCACCGCGCTCCTGGTGACCGAAGGCAACAAG
CCGGTCGGCATCGTGCATCTGCACGACCTGCTGCGGGCGGGCGTGGCGTAG

Upstream 100 bases:

>100_bases
AGAAAGGCTCCGGACCGCGGCTCCGCGCGTCGCATCCCGGGTGGCGGCATGCTAGGAAGGGCCCCCCGGCCACACCTCGG
CCCACGCTTCGGGACCCTGC

Downstream 100 bases:

>100_bases
GCAAGACCCCGAACCCATCCTTCGAGGCCGCCGCGACGCGGCGGCGCCTCAGGATGACGGCGTGCGCGTTGCAGCGCCCG
AGGTCGCCACCCCGTCCTTT

Product: KpsF/GutQ family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 336; Mature: 335

Protein sequence:

>336_residues
MALSKPRTTKPAMTDSAAAIPSALRTLEAEADGVTALAAALRSDLGSAFAAAIETIRNAKGRLIITGLGKSGHIGRKIAA
TFASTGTPAFFVHASEASHGDLGMITADDIILAMSWSGEQPEMKNLISYAKRFRIALIAMTSDSGSTLAKAADISLTLPK
AREACPHNLAPTTSSLMMLALGDAIAIALLESRGFTSTDFSVLHPGGKLGAMLKYARDLMHTGDAVPLKPLGTKMSDALV
EMSAKGFGCVGIVDASGAVAGIVTDGDLRRHMRPDLMTATVDEVMTKRPKTISPGLLAGETLELLNSSKITALLVTEGNK
PVGIVHLHDLLRAGVA

Sequences:

>Translated_336_residues
MALSKPRTTKPAMTDSAAAIPSALRTLEAEADGVTALAAALRSDLGSAFAAAIETIRNAKGRLIITGLGKSGHIGRKIAA
TFASTGTPAFFVHASEASHGDLGMITADDIILAMSWSGEQPEMKNLISYAKRFRIALIAMTSDSGSTLAKAADISLTLPK
AREACPHNLAPTTSSLMMLALGDAIAIALLESRGFTSTDFSVLHPGGKLGAMLKYARDLMHTGDAVPLKPLGTKMSDALV
EMSAKGFGCVGIVDASGAVAGIVTDGDLRRHMRPDLMTATVDEVMTKRPKTISPGLLAGETLELLNSSKITALLVTEGNK
PVGIVHLHDLLRAGVA
>Mature_335_residues
ALSKPRTTKPAMTDSAAAIPSALRTLEAEADGVTALAAALRSDLGSAFAAAIETIRNAKGRLIITGLGKSGHIGRKIAAT
FASTGTPAFFVHASEASHGDLGMITADDIILAMSWSGEQPEMKNLISYAKRFRIALIAMTSDSGSTLAKAADISLTLPKA
REACPHNLAPTTSSLMMLALGDAIAIALLESRGFTSTDFSVLHPGGKLGAMLKYARDLMHTGDAVPLKPLGTKMSDALVE
MSAKGFGCVGIVDASGAVAGIVTDGDLRRHMRPDLMTATVDEVMTKRPKTISPGLLAGETLELLNSSKITALLVTEGNKP
VGIVHLHDLLRAGVA

Specific function: Unknown

COG id: COG0794

COG function: function code M; Predicted sugar phosphate isomerase involved in capsule formation

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SIS domain [H]

Homologues:

Organism=Escherichia coli, GI1789588, Length=300, Percent_Identity=47.3333333333333, Blast_Score=276, Evalue=2e-75,
Organism=Escherichia coli, GI87082151, Length=301, Percent_Identity=43.8538205980066, Blast_Score=227, Evalue=8e-61,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR000644
- InterPro:   IPR004800
- InterPro:   IPR001347 [H]

Pfam domain/function: PF00571 CBS; PF01380 SIS [H]

EC number: NA

Molecular weight: Translated: 34852; Mature: 34721

Theoretical pI: Translated: 8.72; Mature: 8.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALSKPRTTKPAMTDSAAAIPSALRTLEAEADGVTALAAALRSDLGSAFAAAIETIRNAK
CCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
GRLIITGLGKSGHIGRKIAATFASTGTPAFFVHASEASHGDLGMITADDIILAMSWSGEQ
CCEEEEECCCCCCCCHHHHHHHHCCCCCEEEEEECCCCCCCEEEEEECCEEEEEECCCCC
PEMKNLISYAKRFRIALIAMTSDSGSTLAKAADISLTLPKAREACPHNLAPTTSSLMMLA
HHHHHHHHHHHHEEEEEEEEECCCCCCHHEECCEEEECCHHHHCCCCCCCCCHHHHHHHH
LGDAIAIALLESRGFTSTDFSVLHPGGKLGAMLKYARDLMHTGDAVPLKPLGTKMSDALV
HHHHHEEEEHHCCCCCCCCCEEECCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHH
EMSAKGFGCVGIVDASGAVAGIVTDGDLRRHMRPDLMTATVDEVMTKRPKTISPGLLAGE
HHHCCCCCEEEEEECCCCEEEEEECCHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCH
TLELLNSSKITALLVTEGNKPVGIVHLHDLLRAGVA
HHHHHCCCCEEEEEEECCCCCEEEEEHHHHHHHCCC
>Mature Secondary Structure 
ALSKPRTTKPAMTDSAAAIPSALRTLEAEADGVTALAAALRSDLGSAFAAAIETIRNAK
CCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
GRLIITGLGKSGHIGRKIAATFASTGTPAFFVHASEASHGDLGMITADDIILAMSWSGEQ
CCEEEEECCCCCCCCHHHHHHHHCCCCCEEEEEECCCCCCCEEEEEECCEEEEEECCCCC
PEMKNLISYAKRFRIALIAMTSDSGSTLAKAADISLTLPKAREACPHNLAPTTSSLMMLA
HHHHHHHHHHHHEEEEEEEEECCCCCCHHEECCEEEECCHHHHCCCCCCCCCHHHHHHHH
LGDAIAIALLESRGFTSTDFSVLHPGGKLGAMLKYARDLMHTGDAVPLKPLGTKMSDALV
HHHHHEEEEHHCCCCCCCCCEEECCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHH
EMSAKGFGCVGIVDASGAVAGIVTDGDLRRHMRPDLMTATVDEVMTKRPKTISPGLLAGE
HHHCCCCCEEEEEECCCCEEEEEECCHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCH
TLELLNSSKITALLVTEGNKPVGIVHLHDLLRAGVA
HHHHHCCCCEEEEEEECCCCCEEEEEHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9537320 [H]