| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is cutS [H]
Identifier: 86751514
GI number: 86751514
Start: 4999997
End: 5000464
Strand: Reverse
Name: cutS [H]
Synonym: RPB_4413
Alternate gene names: 86751514
Gene position: 5000464-4999997 (Counterclockwise)
Preceding gene: 86751515
Following gene: 86751513
Centisome position: 93.79
GC content: 64.53
Gene sequence:
>468_bases ATGGCCGATATCGCTTCGCTCGACATTTCCTTCACGCTCAACGGCGCGCCGCAGACTCGGTCGGTGGCGCCGTTCGAACT GCTGATCGACTTCCTGCGCGACGATCTTGGACTGAAAGGCACCAAGCGCTCCTGCGACGTGCAGGTGTGCGGCGCCTGCA CCGTGCTGGTCGACGGTCTCCCGGTGAGTAGCTGCACGTCGCTCGCCGCCGACATCGACGGCAGATCGGTGGTGACGATC GAAGGGCTGGCGCAGCGCGGCGAACTCAGCCCGGTGCAGCAGGCGTTCGTCGACCACGCAGCGATGCAGTGCGGATTCTG CACGCCCGGCATGGTGCTGGCGACCACGGCTTTGCTGGAGCACCATCCGCATCCGACCGAGCAGGAGATCCGGCATTATC TGCGCGGCAACATCTGCCGCTGCACCGGCTACATCAAGATCCTCGAAGCGGTGAAGAGCCTTGTCTGA
Upstream 100 bases:
>100_bases GACGACATCTACGGCAGCGCCGACTACAAGCGGCATCTCGCCGCCGTGTTCATCGGACGCGCAGTGCTGGACAGCGCCGG CGTGGCAGGAGGGCGCTGAC
Downstream 100 bases:
>100_bases ACTCTCGATCTCCAGCGACGGCAGAGACGAACCGGCCGTGTTTCGCGACAAGGTCGCGGCCGGCGAAGCCGGTGGCGCCG ACACGATCTGGATCGCCAAC
Product: (2Fe-2S)-binding protein
Products: NA
Alternate protein names: CO dehydrogenase subunit S; CO-DH S [H]
Number of amino acids: Translated: 155; Mature: 154
Protein sequence:
>155_residues MADIASLDISFTLNGAPQTRSVAPFELLIDFLRDDLGLKGTKRSCDVQVCGACTVLVDGLPVSSCTSLAADIDGRSVVTI EGLAQRGELSPVQQAFVDHAAMQCGFCTPGMVLATTALLEHHPHPTEQEIRHYLRGNICRCTGYIKILEAVKSLV
Sequences:
>Translated_155_residues MADIASLDISFTLNGAPQTRSVAPFELLIDFLRDDLGLKGTKRSCDVQVCGACTVLVDGLPVSSCTSLAADIDGRSVVTI EGLAQRGELSPVQQAFVDHAAMQCGFCTPGMVLATTALLEHHPHPTEQEIRHYLRGNICRCTGYIKILEAVKSLV >Mature_154_residues ADIASLDISFTLNGAPQTRSVAPFELLIDFLRDDLGLKGTKRSCDVQVCGACTVLVDGLPVSSCTSLAADIDGRSVVTIE GLAQRGELSPVQQAFVDHAAMQCGFCTPGMVLATTALLEHHPHPTEQEIRHYLRGNICRCTGYIKILEAVKSLV
Specific function: Catalyzes the oxidation of carbon monoxide to carbon dioxide [H]
COG id: COG2080
COG function: function code C; Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 2Fe-2S ferredoxin-type domain [H]
Homologues:
Organism=Homo sapiens, GI91823271, Length=156, Percent_Identity=35.8974358974359, Blast_Score=89, Evalue=2e-18, Organism=Homo sapiens, GI71773480, Length=159, Percent_Identity=36.4779874213836, Blast_Score=82, Evalue=2e-16, Organism=Escherichia coli, GI1789232, Length=156, Percent_Identity=46.7948717948718, Blast_Score=129, Evalue=7e-32, Organism=Escherichia coli, GI1786480, Length=161, Percent_Identity=37.888198757764, Blast_Score=115, Evalue=1e-27, Organism=Escherichia coli, GI1789246, Length=145, Percent_Identity=33.1034482758621, Blast_Score=75, Evalue=2e-15, Organism=Caenorhabditis elegans, GI17539860, Length=157, Percent_Identity=40.1273885350318, Blast_Score=121, Evalue=1e-28, Organism=Caenorhabditis elegans, GI32566215, Length=157, Percent_Identity=38.2165605095541, Blast_Score=117, Evalue=3e-27, Organism=Caenorhabditis elegans, GI17540638, Length=168, Percent_Identity=38.0952380952381, Blast_Score=114, Evalue=2e-26, Organism=Drosophila melanogaster, GI17737937, Length=156, Percent_Identity=38.4615384615385, Blast_Score=99, Evalue=9e-22, Organism=Drosophila melanogaster, GI24647199, Length=157, Percent_Identity=36.9426751592357, Blast_Score=91, Evalue=3e-19, Organism=Drosophila melanogaster, GI24647201, Length=157, Percent_Identity=36.9426751592357, Blast_Score=88, Evalue=2e-18, Organism=Drosophila melanogaster, GI24647195, Length=163, Percent_Identity=34.3558282208589, Blast_Score=86, Evalue=1e-17, Organism=Drosophila melanogaster, GI24647197, Length=163, Percent_Identity=34.3558282208589, Blast_Score=86, Evalue=1e-17, Organism=Drosophila melanogaster, GI24647193, Length=158, Percent_Identity=34.8101265822785, Blast_Score=81, Evalue=2e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002888 - InterPro: IPR012675 - InterPro: IPR001041 [H]
Pfam domain/function: PF00111 Fer2; PF01799 Fer2_2 [H]
EC number: =1.2.99.2 [H]
Molecular weight: Translated: 16613; Mature: 16482
Theoretical pI: Translated: 5.53; Mature: 5.53
Prosite motif: PS51085 2FE2S_FER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.2 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 7.1 %Cys+Met (Translated Protein) 5.2 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 6.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADIASLDISFTLNGAPQTRSVAPFELLIDFLRDDLGLKGTKRSCDVQVCGACTVLVDGL CCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCEEEHHHEEEHCCCC PVSSCTSLAADIDGRSVVTIEGLAQRGELSPVQQAFVDHAAMQCGFCTPGMVLATTALLE CHHHHHHHHHCCCCCEEEEEECHHCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH HHPHPTEQEIRHYLRGNICRCTGYIKILEAVKSLV CCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCC >Mature Secondary Structure ADIASLDISFTLNGAPQTRSVAPFELLIDFLRDDLGLKGTKRSCDVQVCGACTVLVDGL CCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCEEEHHHEEEHCCCC PVSSCTSLAADIDGRSVVTIEGLAQRGELSPVQQAFVDHAAMQCGFCTPGMVLATTALLE CHHHHHHHHHCCCCCEEEEEECHHCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH HHPHPTEQEIRHYLRGNICRCTGYIKILEAVKSLV CCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10482497; 2818128; 10966817; 11076018 [H]