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The map label for this gene is ynhG [H]

Identifier: 86751464

GI number: 86751464

Start: 4946236

End: 4946889

Strand: Direct

Name: ynhG [H]

Synonym: RPB_4362

Alternate gene names: 86751464

Gene position: 4946236-4946889 (Clockwise)

Preceding gene: 86751463

Following gene: 86751474

Centisome position: 92.77

GC content: 68.35

Gene sequence:

>654_bases
ATGTCCCTCCGGTCGTTGCTCGCCCTCGCCGCCGTCGCCGTCACGCTCGGCGGCTGCGTCACCCAGTCCGAAGCCGAACT
CGATCTCGGCCCGCCGAAGAGCACGGTGGGGCCGGCGATCGCGGCGCGCTATGCGGCGATCGACACCGACAAACACCCGA
TCGCCGGCATCGATCCGGAGGATCTGCAGCCGGCCTATGTACGGCAGTTGGTCGACTACAAGACCGACGAGCCGCCGGGC
ACCGTGGTGGTCGATCCGCACCGGCGCTTTCTCTATCTGGTGATGGAAGGCGGCAAGGCGCTGCGCTACGGCGTCGGCGT
CGGCAAGGCCGGGCTGGCATTCAGCGGCACCGCCCATGTCGGACGCAAGGCCGAATGGCCGCACTGGACCCCGACGAAGA
ACATGATCGCCCGCGAGCCGCAGCGCTACGGCAAATGGGCGAGCGGCATGGACGGCGGCGCCACCAATCCGCTCGGCCCG
CGGGCGCTGTATCTGTTCAAGGACGGCAAGGACACGCTGTACCGCATCCACGGCACCACCGAGCCGGAGACGATCGGCCA
GGCGGTGTCGTCCGGCTGCATCCGGATGCTGAACCAGGACGTCATCGACCTGTACGCGCGCGTGCCGAAGGGCGCCAAGG
TGGTGGTCAAATAG

Upstream 100 bases:

>100_bases
AGGTCGCCGCCGCGCTCGATGCCGCCGCGTTCAAGAAGGTGGTCGATCAGGCGCGCGCGCGCCCGCCCGCGAAGTGAGCG
GCGTGATCGTTCGATTGCCG

Downstream 100 bases:

>100_bases
CGCCGCGCGCGATCGGATCGACGCGCCGCGCTCAGCCGAAGATGTCCGTCGTCATGCCGATGTACCAGCCCGCCGCCTCG
CGCGCCTGCTTGGCGCGCAG

Product: ErfK/YbiS/YcfS/YnhG

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 217; Mature: 216

Protein sequence:

>217_residues
MSLRSLLALAAVAVTLGGCVTQSEAELDLGPPKSTVGPAIAARYAAIDTDKHPIAGIDPEDLQPAYVRQLVDYKTDEPPG
TVVVDPHRRFLYLVMEGGKALRYGVGVGKAGLAFSGTAHVGRKAEWPHWTPTKNMIAREPQRYGKWASGMDGGATNPLGP
RALYLFKDGKDTLYRIHGTTEPETIGQAVSSGCIRMLNQDVIDLYARVPKGAKVVVK

Sequences:

>Translated_217_residues
MSLRSLLALAAVAVTLGGCVTQSEAELDLGPPKSTVGPAIAARYAAIDTDKHPIAGIDPEDLQPAYVRQLVDYKTDEPPG
TVVVDPHRRFLYLVMEGGKALRYGVGVGKAGLAFSGTAHVGRKAEWPHWTPTKNMIAREPQRYGKWASGMDGGATNPLGP
RALYLFKDGKDTLYRIHGTTEPETIGQAVSSGCIRMLNQDVIDLYARVPKGAKVVVK
>Mature_216_residues
SLRSLLALAAVAVTLGGCVTQSEAELDLGPPKSTVGPAIAARYAAIDTDKHPIAGIDPEDLQPAYVRQLVDYKTDEPPGT
VVVDPHRRFLYLVMEGGKALRYGVGVGKAGLAFSGTAHVGRKAEWPHWTPTKNMIAREPQRYGKWASGMDGGATNPLGPR
ALYLFKDGKDTLYRIHGTTEPETIGQAVSSGCIRMLNQDVIDLYARVPKGAKVVVK

Specific function: Responsible, at least in part, for generating a meso- diaminopimelyl-3-a meso-diaminopimelyl-3 cross-link [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 LysM repeat [H]

Homologues:

Organism=Escherichia coli, GI1787968, Length=143, Percent_Identity=35.6643356643357, Blast_Score=70, Evalue=1e-13,
Organism=Escherichia coli, GI1788299, Length=139, Percent_Identity=33.8129496402878, Blast_Score=70, Evalue=1e-13,
Organism=Escherichia coli, GI1787040, Length=137, Percent_Identity=32.8467153284672, Blast_Score=67, Evalue=1e-12,
Organism=Escherichia coli, GI1787356, Length=145, Percent_Identity=32.4137931034483, Blast_Score=65, Evalue=5e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018392
- InterPro:   IPR002482
- InterPro:   IPR005490 [H]

Pfam domain/function: PF01476 LysM; PF03734 YkuD [H]

EC number: NA

Molecular weight: Translated: 23294; Mature: 23163

Theoretical pI: Translated: 9.25; Mature: 9.25

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLRSLLALAAVAVTLGGCVTQSEAELDLGPPKSTVGPAIAARYAAIDTDKHPIAGIDPE
CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHCHHHHHHHHHCCCCCCCCCCCCHH
DLQPAYVRQLVDYKTDEPPGTVVVDPHRRFLYLVMEGGKALRYGVGVGKAGLAFSGTAHV
HCCHHHHHHHHHCCCCCCCCEEEECCCCEEEEEEEECCCEEEEECCCCCCCCEECCCCCC
GRKAEWPHWTPTKNMIAREPQRYGKWASGMDGGATNPLGPRALYLFKDGKDTLYRIHGTT
CCCCCCCCCCCCHHHHHCCHHHHCCCCCCCCCCCCCCCCCEEEEEEECCCCEEEEEECCC
EPETIGQAVSSGCIRMLNQDVIDLYARVPKGAKVVVK
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEC
>Mature Secondary Structure 
SLRSLLALAAVAVTLGGCVTQSEAELDLGPPKSTVGPAIAARYAAIDTDKHPIAGIDPE
CHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHCHHHHHHHHHCCCCCCCCCCCCHH
DLQPAYVRQLVDYKTDEPPGTVVVDPHRRFLYLVMEGGKALRYGVGVGKAGLAFSGTAHV
HCCHHHHHHHHHCCCCCCCCEEEECCCCEEEEEEEECCCEEEEECCCCCCCCEECCCCCC
GRKAEWPHWTPTKNMIAREPQRYGKWASGMDGGATNPLGPRALYLFKDGKDTLYRIHGTT
CCCCCCCCCCCCHHHHHCCHHHHCCCCCCCCCCCCCCCCCEEEEEEECCCCEEEEEECCC
EPETIGQAVSSGCIRMLNQDVIDLYARVPKGAKVVVK
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503; 9097039 [H]