| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is 86751459
Identifier: 86751459
GI number: 86751459
Start: 4940782
End: 4941228
Strand: Direct
Name: 86751459
Synonym: RPB_4357
Alternate gene names: NA
Gene position: 4940782-4941228 (Clockwise)
Preceding gene: 86751456
Following gene: 86751462
Centisome position: 92.67
GC content: 63.98
Gene sequence:
>447_bases ATGCCCATTCAAACATATGCGCTGGCGGCAGCGCCGCAACGGACGATCGCAGGCTGGCACCAGGCGCTTCCGACCGGCGA CGTGGACACTTTGCGGAATCTGCTCGCCGAACAGGTGACGTTTCATTCGCCCGCCGTCCAGACGCCGGTCCGGGGCCGTG ATGCCTCGTTGCTGGTGTTGGCCACGGTCGTCGATGTGCTTGAAAACATGTGCTATCGGCGGACCTTCGTCGCCGGACCA TGCGAGGCCGCGCTCGAATTCAGCGCGGATATCGGCCAATTTCATCTCACCGGCATCGATCTGATGCGTTTCCGCGACGA CGGGCTGATCGTCGAATTCGAGGTGATGATGCGGCCGCTGCGAGCCCTGTCGGCGGTCGCCGAATCGGTCGGCCGCCGGA TCGGGCCGCGGCTGCTGGACATGAAACTCAAACCGGACCCGGGCTAA
Upstream 100 bases:
>100_bases TCGTTCATGGCGTGCTTTGCTGACGACCTTCGGCGATCGTCGCCTTCATTATTTTGCGATCGCTGTGCTGCATTTGAATC ATCGATTTTGGAGAGACGGA
Downstream 100 bases:
>100_bases AGTCGCATCGCGGCCCGAGCCCGGCGTTCTGCCGGCATCCCTTTGTTATCCATTGCGCTTTGCAGACCGGCGCGTTCGGG ACGCCGGGCGCATTTTCACC
Product: hypothetical protein
Products: NA
Alternate protein names: NADH Flavin Oxidoreductase/NADH Oxidase
Number of amino acids: Translated: 148; Mature: 147
Protein sequence:
>148_residues MPIQTYALAAAPQRTIAGWHQALPTGDVDTLRNLLAEQVTFHSPAVQTPVRGRDASLLVLATVVDVLENMCYRRTFVAGP CEAALEFSADIGQFHLTGIDLMRFRDDGLIVEFEVMMRPLRALSAVAESVGRRIGPRLLDMKLKPDPG
Sequences:
>Translated_148_residues MPIQTYALAAAPQRTIAGWHQALPTGDVDTLRNLLAEQVTFHSPAVQTPVRGRDASLLVLATVVDVLENMCYRRTFVAGP CEAALEFSADIGQFHLTGIDLMRFRDDGLIVEFEVMMRPLRALSAVAESVGRRIGPRLLDMKLKPDPG >Mature_147_residues PIQTYALAAAPQRTIAGWHQALPTGDVDTLRNLLAEQVTFHSPAVQTPVRGRDASLLVLATVVDVLENMCYRRTFVAGPC EAALEFSADIGQFHLTGIDLMRFRDDGLIVEFEVMMRPLRALSAVAESVGRRIGPRLLDMKLKPDPG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16257; Mature: 16126
Theoretical pI: Translated: 6.25; Mature: 6.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPIQTYALAAAPQRTIAGWHQALPTGDVDTLRNLLAEQVTFHSPAVQTPVRGRDASLLVL CCCCHHHHHCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHH ATVVDVLENMCYRRTFVAGPCEAALEFSADIGQFHLTGIDLMRFRDDGLIVEFEVMMRPL HHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCEEEECCEEEEEECCCCEEEEHHHHHHHH RALSAVAESVGRRIGPRLLDMKLKPDPG HHHHHHHHHHHHHCCCHHEEEECCCCCC >Mature Secondary Structure PIQTYALAAAPQRTIAGWHQALPTGDVDTLRNLLAEQVTFHSPAVQTPVRGRDASLLVL CCCHHHHHCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHH ATVVDVLENMCYRRTFVAGPCEAALEFSADIGQFHLTGIDLMRFRDDGLIVEFEVMMRPL HHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCEEEECCEEEEEECCCCEEEEHHHHHHHH RALSAVAESVGRRIGPRLLDMKLKPDPG HHHHHHHHHHHHHCCCHHEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA