Definition Rhodopseudomonas palustris HaA2, complete genome.
Accession NC_007778
Length 5,331,656

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The map label for this gene is bcsP31 [H]

Identifier: 86751433

GI number: 86751433

Start: 4915232

End: 4916179

Strand: Reverse

Name: bcsP31 [H]

Synonym: RPB_4331

Alternate gene names: 86751433

Gene position: 4916179-4915232 (Counterclockwise)

Preceding gene: 86751438

Following gene: 86751432

Centisome position: 92.21

GC content: 64.24

Gene sequence:

>948_bases
ATGAAGGCCAGATTTTTGGGTTTCGCCGCGGCTGCGGCCGTGCTCGTTTCGGCGCCGCAGGCTCACGCCCAGCAGTTCGT
CAACGTGCTGACCGGCGGCACGTCCGGCGTGTATTATCCGCTCGGCGTCGCGATCGCGAAGATCTACGGCGACAAGATTC
CGAACGTGAAGTCGCAGGTGCAGGCCACCAAGGCGTCGGTCGAGAACCTCAATTTGCTGCAGCAGGGCCGCGGCGAGATC
GCCTTCACGCTCGGCGACTCGCTGAAAGCGGCGTGGGACGGCGATCCTGAGGCCGGCTTCAAGGCCAAGCTCGACAAGCT
GCGCGTGATCGGCGCGATCTATCCGAACTACATCCAGATCGTCGCCACCGCGGAGTCGGGGATCAAGACGCTCGCCGACC
TCAAGGGCAAGAGCCTGTCGGTCGGCGCGCCGAAATCCGGCACCGAGCTGAATTCCCGCGCCATCCTCAAGGCCGCCGGG
ATGGATTACAAGGACATGGGCAAGATCGAATATCTGCCGTTCGCCGAATCCGTCGACCTGATGAAGAACCGCCAGCTCGC
CGCCACGCTGCAATCCGCAGGCCTCGGCGTCGCCTCGCTCAAGGATCTCAGCAACTCCTCCGAGATCAACGTGGTCTCGG
TGCCGAAGGACGTGGTCGACAAGATCGGCCCGCCGTTCGTCGCCGAAACGATCCCGGCCGGCACCTACAAGGGCCAGGAC
AAGGACGTTCCGACCGCGGCGGTGATCAACTATCTCGTCACTTCGACCGCGGTGTCCGACGATCTCGCCTATCAGATGAC
CAAGCTGGTGTTCGACTCGCTGCCGGACCTCGCCAGCGCCCACGCCGCCGGCAAGGGCATCAAGCTCGAGACCGCCGCGG
CCGGCAGCCCGGTTCCGCTGCACCCCGGCGCGATCAAGTACTTCAAGGAAAAGGGCGTGCTGAAGTAA

Upstream 100 bases:

>100_bases
TGTTCCCCGGGGCGGCGGTCCGCCGCCGATTTGACGGGTTGACCGCGGCGTTCCGGCCGTTCAGTTTCGCTGCCAAACAA
CCTAGGGGAGAAAACTGTTC

Downstream 100 bases:

>100_bases
GCTCGTCGGCGAACATCGCACGACATCGTCATGCGCGGGCTTGACCCGCGCATCCATCATGTTTCGAAAGATGGATGGCC
GGGTCAAGCCCGGCCATGAC

Product: TRAP transporter solute receptor TAXI family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 315; Mature: 315

Protein sequence:

>315_residues
MKARFLGFAAAAAVLVSAPQAHAQQFVNVLTGGTSGVYYPLGVAIAKIYGDKIPNVKSQVQATKASVENLNLLQQGRGEI
AFTLGDSLKAAWDGDPEAGFKAKLDKLRVIGAIYPNYIQIVATAESGIKTLADLKGKSLSVGAPKSGTELNSRAILKAAG
MDYKDMGKIEYLPFAESVDLMKNRQLAATLQSAGLGVASLKDLSNSSEINVVSVPKDVVDKIGPPFVAETIPAGTYKGQD
KDVPTAAVINYLVTSTAVSDDLAYQMTKLVFDSLPDLASAHAAGKGIKLETAAAGSPVPLHPGAIKYFKEKGVLK

Sequences:

>Translated_315_residues
MKARFLGFAAAAAVLVSAPQAHAQQFVNVLTGGTSGVYYPLGVAIAKIYGDKIPNVKSQVQATKASVENLNLLQQGRGEI
AFTLGDSLKAAWDGDPEAGFKAKLDKLRVIGAIYPNYIQIVATAESGIKTLADLKGKSLSVGAPKSGTELNSRAILKAAG
MDYKDMGKIEYLPFAESVDLMKNRQLAATLQSAGLGVASLKDLSNSSEINVVSVPKDVVDKIGPPFVAETIPAGTYKGQD
KDVPTAAVINYLVTSTAVSDDLAYQMTKLVFDSLPDLASAHAAGKGIKLETAAAGSPVPLHPGAIKYFKEKGVLK
>Mature_315_residues
MKARFLGFAAAAAVLVSAPQAHAQQFVNVLTGGTSGVYYPLGVAIAKIYGDKIPNVKSQVQATKASVENLNLLQQGRGEI
AFTLGDSLKAAWDGDPEAGFKAKLDKLRVIGAIYPNYIQIVATAESGIKTLADLKGKSLSVGAPKSGTELNSRAILKAAG
MDYKDMGKIEYLPFAESVDLMKNRQLAATLQSAGLGVASLKDLSNSSEINVVSVPKDVVDKIGPPFVAETIPAGTYKGQD
KDVPTAAVINYLVTSTAVSDDLAYQMTKLVFDSLPDLASAHAAGKGIKLETAAAGSPVPLHPGAIKYFKEKGVLK

Specific function: Unknown

COG id: COG2358

COG function: function code R; TRAP-type uncharacterized transport system, periplasmic component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015168
- InterPro:   IPR011852 [H]

Pfam domain/function: PF09084 NMT1 [H]

EC number: NA

Molecular weight: Translated: 32950; Mature: 32950

Theoretical pI: Translated: 9.57; Mature: 9.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKARFLGFAAAAAVLVSAPQAHAQQFVNVLTGGTSGVYYPLGVAIAKIYGDKIPNVKSQV
CCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHCCCCCHHHHH
QATKASVENLNLLQQGRGEIAFTLGDSLKAAWDGDPEAGFKAKLDKLRVIGAIYPNYIQI
HHHHHHHHHHHHHHCCCCCEEEEECCCCEECCCCCCCCCHHHHHHHHHHHHHHCCCEEEE
VATAESGIKTLADLKGKSLSVGAPKSGTELNSRAILKAAGMDYKDMGKIEYLPFAESVDL
EEECHHHHHHHHHCCCCEEECCCCCCCCCCCCHHHHHHCCCCHHHCCCEEECCCHHHHHH
MKNRQLAATLQSAGLGVASLKDLSNSSEINVVSVPKDVVDKIGPPFVAETIPAGTYKGQD
HHCCHHHHHHHHCCCCHHHHHHCCCCCCEEEEECCHHHHHHCCCCHHHHCCCCCCCCCCC
KDVPTAAVINYLVTSTAVSDDLAYQMTKLVFDSLPDLASAHAAGKGIKLETAAAGSPVPL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCEEEEECCCCCCCCC
HPGAIKYFKEKGVLK
CCHHHHHHHHCCCCC
>Mature Secondary Structure
MKARFLGFAAAAAVLVSAPQAHAQQFVNVLTGGTSGVYYPLGVAIAKIYGDKIPNVKSQV
CCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHCCCCCHHHHH
QATKASVENLNLLQQGRGEIAFTLGDSLKAAWDGDPEAGFKAKLDKLRVIGAIYPNYIQI
HHHHHHHHHHHHHHCCCCCEEEEECCCCEECCCCCCCCCHHHHHHHHHHHHHHCCCEEEE
VATAESGIKTLADLKGKSLSVGAPKSGTELNSRAILKAAGMDYKDMGKIEYLPFAESVDL
EEECHHHHHHHHHCCCCEEECCCCCCCCCCCCHHHHHHCCCCHHHCCCEEECCCHHHHHH
MKNRQLAATLQSAGLGVASLKDLSNSSEINVVSVPKDVVDKIGPPFVAETIPAGTYKGQD
HHCCHHHHHHHHCCCCHHHHHHCCCCCCEEEEECCHHHHHHCCCCHHHHCCCCCCCCCCC
KDVPTAAVINYLVTSTAVSDDLAYQMTKLVFDSLPDLASAHAAGKGIKLETAAAGSPVPL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCEEEEECCCCCCCCC
HPGAIKYFKEKGVLK
CCHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3133283 [H]