Definition Rhodopseudomonas palustris HaA2, complete genome.
Accession NC_007778
Length 5,331,656

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The map label for this gene is 86751421

Identifier: 86751421

GI number: 86751421

Start: 4903938

End: 4904132

Strand: Direct

Name: 86751421

Synonym: RPB_4319

Alternate gene names: NA

Gene position: 4903938-4904132 (Clockwise)

Preceding gene: 86751418

Following gene: 86751422

Centisome position: 91.98

GC content: 56.92

Gene sequence:

>195_bases
ATGAAGGTTCGGGACGCAATTCTTCTGATCGAAGCAGACGGATGGGTCCACATTGCGACCCGAGGAAGCCATCGGCAGTA
CAAGCATCCGAGGAAGACCGGCCGCGTGACGATCGCAGGCAAGCCTTCTGATGATCTTGCTCCCGGCACGTTTGCCAGTA
TCTTGAAACAAGCAGGTCTGAAGGAGCGGCGCTGA

Upstream 100 bases:

>100_bases
GTCAAGGGGGCGACGGGGCGTACGACCAAAGCAGCAAGGGCACGTACTGTCTTTGACATAGGCTAGATCCGATCCGACCG
AAGGCGGGACGCGCGCTTCA

Downstream 100 bases:

>100_bases
TGCGCTACGCGATCGTCATCGAAAAGACCGAGGGCAACTATTCGGCCTATGTGCCGGACCTGCCCGGCTGTGTCGCGACC
GGCGACAGCGTCGCGGCGGT

Product: YcfA-like

Products: NA

Alternate protein names: YcfA Superfamily Protein; YcfA-Like Protein; YcfA-Like

Number of amino acids: Translated: 64; Mature: 64

Protein sequence:

>64_residues
MKVRDAILLIEADGWVHIATRGSHRQYKHPRKTGRVTIAGKPSDDLAPGTFASILKQAGLKERR

Sequences:

>Translated_64_residues
MKVRDAILLIEADGWVHIATRGSHRQYKHPRKTGRVTIAGKPSDDLAPGTFASILKQAGLKERR
>Mature_64_residues
MKVRDAILLIEADGWVHIATRGSHRQYKHPRKTGRVTIAGKPSDDLAPGTFASILKQAGLKERR

Specific function: Unknown

COG id: COG1724

COG function: function code N; Predicted periplasmic or secreted lipoprotein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 7120; Mature: 7120

Theoretical pI: Translated: 11.33; Mature: 11.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVRDAILLIEADGWVHIATRGSHRQYKHPRKTGRVTIAGKPSDDLAPGTFASILKQAGL
CCCCCEEEEEECCCEEEEEECCCCCCCCCCCCCCCEEECCCCCCCCCCCHHHHHHHHCCC
KERR
CCCC
>Mature Secondary Structure
MKVRDAILLIEADGWVHIATRGSHRQYKHPRKTGRVTIAGKPSDDLAPGTFASILKQAGL
CCCCCEEEEEECCCEEEEEECCCCCCCCCCCCCCCEEECCCCCCCCCCCHHHHHHHHCCC
KERR
CCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA