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The map label for this gene is yqjI [H]

Identifier: 86751409

GI number: 86751409

Start: 4892223

End: 4892807

Strand: Reverse

Name: yqjI [H]

Synonym: RPB_4307

Alternate gene names: 86751409

Gene position: 4892807-4892223 (Counterclockwise)

Preceding gene: 86751414

Following gene: 86751408

Centisome position: 91.77

GC content: 69.57

Gene sequence:

>585_bases
ATGGAAGGCATCGACAACGGCTTGCGGCGATGCGGCTCCGGATGCCGCTGGGGCCGCCGTGGCTTCGGCGGGCGTGGCGC
CGGCAACGGCGAGACGACCCGCGCCGGCCGGATGCTGGCGCAGGGCGACCTCAAACTGATCGCGCTGGCGCTGATCGCCG
AGCAGCCGCGCCACGGCTACGACATCATCAAGGTGATCGAGGAGAAGACCGCGGGCTGGTACGCGCCGAGCCCCGGCGTG
GTGTACCCGACGCTGACCTATCTGGAGGAGATGGGCCACGTCGTCGCGCAGCCGGAAGGCGCCAAGAAACTCTACGTCAT
CACCGACGACGGCCGCGATCAGCTCGCGGCGAACCGCGTGCTCGCCGACGCGGTGTTCGAGCGGCTGGCCAGCTTCGGCG
AAATGATGCGCCAGCAGACCGGCAATGGGGGCGGCGCCGAGGGCGGCGATGTTCCGCCGCTGCTGCGCGCCGCGCTCGAC
AATCTGCGCGACGTGGCGATCCGGCAGATCGCCAAGGACGCGGACAATGAAGCCGAGCTGGTCGCGATTCTCGCGCGCGC
GGCGGGTGAACTACGCAAAGTTTAG

Upstream 100 bases:

>100_bases
TTGTGCGGCAGGGGCGCCGCTCTGGCGGGCTGATCGAAGATATATCTTTACAACCCCCGGGCTGGGGCGTACTTACGATA
TATCTTCGTGAGGTTTGGCC

Downstream 100 bases:

>100_bases
CCACGAGAGCGGGGCGGCCCCGCAGGACATTCGGCTGCGCATCGGATCGATCCGGAATGCAGCCGCTACTCAGGAGACCA
AGATGACCGCAATCACATCC

Product: PadR-like family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 194; Mature: 194

Protein sequence:

>194_residues
MEGIDNGLRRCGSGCRWGRRGFGGRGAGNGETTRAGRMLAQGDLKLIALALIAEQPRHGYDIIKVIEEKTAGWYAPSPGV
VYPTLTYLEEMGHVVAQPEGAKKLYVITDDGRDQLAANRVLADAVFERLASFGEMMRQQTGNGGGAEGGDVPPLLRAALD
NLRDVAIRQIAKDADNEAELVAILARAAGELRKV

Sequences:

>Translated_194_residues
MEGIDNGLRRCGSGCRWGRRGFGGRGAGNGETTRAGRMLAQGDLKLIALALIAEQPRHGYDIIKVIEEKTAGWYAPSPGV
VYPTLTYLEEMGHVVAQPEGAKKLYVITDDGRDQLAANRVLADAVFERLASFGEMMRQQTGNGGGAEGGDVPPLLRAALD
NLRDVAIRQIAKDADNEAELVAILARAAGELRKV
>Mature_194_residues
MEGIDNGLRRCGSGCRWGRRGFGGRGAGNGETTRAGRMLAQGDLKLIALALIAEQPRHGYDIIKVIEEKTAGWYAPSPGV
VYPTLTYLEEMGHVVAQPEGAKKLYVITDDGRDQLAANRVLADAVFERLASFGEMMRQQTGNGGGAEGGDVPPLLRAALD
NLRDVAIRQIAKDADNEAELVAILARAAGELRKV

Specific function: Unknown

COG id: COG1695

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789452, Length=160, Percent_Identity=31.25, Blast_Score=84, Evalue=6e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005149
- InterPro:   IPR011991 [H]

Pfam domain/function: PF03551 PadR [H]

EC number: NA

Molecular weight: Translated: 20772; Mature: 20772

Theoretical pI: Translated: 6.54; Mature: 6.54

Prosite motif: PS00211 ABC_TRANSPORTER_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEGIDNGLRRCGSGCRWGRRGFGGRGAGNGETTRAGRMLAQGDLKLIALALIAEQPRHGY
CCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHCCCCCH
DIIKVIEEKTAGWYAPSPGVVYPTLTYLEEMGHVVAQPEGAKKLYVITDDGRDQLAANRV
HHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHH
LADAVFERLASFGEMMRQQTGNGGGAEGGDVPPLLRAALDNLRDVAIRQIAKDADNEAEL
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHH
VAILARAAGELRKV
HHHHHHHHHHHHCC
>Mature Secondary Structure
MEGIDNGLRRCGSGCRWGRRGFGGRGAGNGETTRAGRMLAQGDLKLIALALIAEQPRHGY
CCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHCCCCCH
DIIKVIEEKTAGWYAPSPGVVYPTLTYLEEMGHVVAQPEGAKKLYVITDDGRDQLAANRV
HHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHH
LADAVFERLASFGEMMRQQTGNGGGAEGGDVPPLLRAALDNLRDVAIRQIAKDADNEAEL
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHH
VAILARAAGELRKV
HHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]