| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is 86751407
Identifier: 86751407
GI number: 86751407
Start: 4891057
End: 4891455
Strand: Reverse
Name: 86751407
Synonym: RPB_4305
Alternate gene names: NA
Gene position: 4891455-4891057 (Counterclockwise)
Preceding gene: 86751408
Following gene: 86751406
Centisome position: 91.74
GC content: 69.67
Gene sequence:
>399_bases ATGCTGATCGCCGTCGCCAGCCAGAATTTCCGCACCGTCACCGGCCATGCCGGCAAGTCCCGCCGCTTCATGGTGTTCGA TGCGGCGCCCGGCCGCGCCCCGCAGGAGGTCGATCGCCTCGACCTGCCGAAGGAGATGTCGATTCACGAATTCACCGAGC AGGGCCCGCATCCGCTCGACGCCGTCGATGTGGTGATCGCCGGCAGCGCCGGTGCCGGCTTCATCAGCCGGATGGCCGCG CGCGATGTCATCGCGATCACCACCGCCGAAACCGACCCGGTCGTCGCGGTGCAGACCTATCTCGCCGGCACGCTCGCCCC CGCCGCGCCGCACGATCACGACGACGAGGCGGAAGAAGAAGGCGGCTGCGACTGCCATTGCGGCCAGGCGGCGGGCTGA
Upstream 100 bases:
>100_bases GTCGACCTGCGCCGACCGTCCGGCACCGTCCGCTGTTCAGCGCGCGGCCGATCAACGGCGCGCGCCCGGACTCCACTCCA ACCACCGAAAGACCAGAGCC
Downstream 100 bases:
>100_bases ATTCTCTTCTCACGGATCGCGCATGCATCAATCAACACCACCTCATACTGAGAGGCTGACTCAAAATGAGCGCAACAAGA TCAGGCACTTGAGTTCGTCA
Product: nitrogen fixation-related protein
Products: NA
Alternate protein names: Dinitrogenase Iron-Molybdenum Cofactor Biosynthesis Protein; Nitrogen Fixation-Like Protein; Dinitrogenase Iron-Molybdenum Cofactor Biosynthesis; Nitrogenase Accessory Factor; Dinitrogenase Iron-Molybdenum Cofactor; Nitrogen Fixation Related Protein
Number of amino acids: Translated: 132; Mature: 132
Protein sequence:
>132_residues MLIAVASQNFRTVTGHAGKSRRFMVFDAAPGRAPQEVDRLDLPKEMSIHEFTEQGPHPLDAVDVVIAGSAGAGFISRMAA RDVIAITTAETDPVVAVQTYLAGTLAPAAPHDHDDEAEEEGGCDCHCGQAAG
Sequences:
>Translated_132_residues MLIAVASQNFRTVTGHAGKSRRFMVFDAAPGRAPQEVDRLDLPKEMSIHEFTEQGPHPLDAVDVVIAGSAGAGFISRMAA RDVIAITTAETDPVVAVQTYLAGTLAPAAPHDHDDEAEEEGGCDCHCGQAAG >Mature_132_residues MLIAVASQNFRTVTGHAGKSRRFMVFDAAPGRAPQEVDRLDLPKEMSIHEFTEQGPHPLDAVDVVIAGSAGAGFISRMAA RDVIAITTAETDPVVAVQTYLAGTLAPAAPHDHDDEAEEEGGCDCHCGQAAG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13825; Mature: 13825
Theoretical pI: Translated: 4.48; Mature: 4.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLIAVASQNFRTVTGHAGKSRRFMVFDAAPGRAPQEVDRLDLPKEMSIHEFTEQGPHPLD CEEEEECCCCEEEECCCCCCCEEEEEECCCCCCCCHHHHCCCCCCCCHHHHHHCCCCCCC AVDVVIAGSAGAGFISRMAARDVIAITTAETDPVVAVQTYLAGTLAPAAPHDHDDEAEEE EEEEEEECCCCCHHHHHHHHCCEEEEEECCCCCEEEEHHHHHHHCCCCCCCCCCCCCHHC GGCDCHCGQAAG CCCCCCCCCCCC >Mature Secondary Structure MLIAVASQNFRTVTGHAGKSRRFMVFDAAPGRAPQEVDRLDLPKEMSIHEFTEQGPHPLD CEEEEECCCCEEEECCCCCCCEEEEEECCCCCCCCHHHHCCCCCCCCHHHHHHCCCCCCC AVDVVIAGSAGAGFISRMAARDVIAITTAETDPVVAVQTYLAGTLAPAAPHDHDDEAEEE EEEEEEECCCCCHHHHHHHHCCEEEEEECCCCCEEEEHHHHHHHCCCCCCCCCCCCCHHC GGCDCHCGQAAG CCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA