| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is nhaA2 [H]
Identifier: 86751401
GI number: 86751401
Start: 4884964
End: 4885632
Strand: Reverse
Name: nhaA2 [H]
Synonym: RPB_4299
Alternate gene names: 86751401
Gene position: 4885632-4884964 (Counterclockwise)
Preceding gene: 86751402
Following gene: 86751400
Centisome position: 91.63
GC content: 67.41
Gene sequence:
>669_bases ATGGAATTGGAACCGATGATGATCACCCGACGATCGGCGCTGATGACCGCCCTGTCGCTCGCGCCGGCGCTGGCCGCGTC GAAGGCGTGGGCCGCACCGGCCGCGCCGGCGTCGGACGACAACGTGCTGTCGACCGAGGCGGTGCTGCGCGATCCCGACA TTCCGGTCGCCGGCAATCCCGACGGCGACATCACCATCGTCGAGTGGTCGGACTATCGCTGTCCCTACTGCAAGAAGGTT GCGCCCGATCTCAGGCAGGTCGTGAAGGACGACGGCAAGGTTCGTCTGGTGCTGAAGGACTGGCCGATCTTCGGCGGCAT CTCGGTCGATGCGGCCAAGATGGTGCTGGCGTCGAAATATCAGGGCAAGTTCTTCGAGGCGCACGACGCGCTGATCGGCA GCACCGCGAAACTGACGTCGGCCGGCCTCACCGAATTGCTCGGCGCCGGCGGCGTCGACGTCGCGCGCGCGACCAGGGAC CTCGACACCAACGGCGCCGCGATCGAGGCGATCCTGGCGCGGAACGATGCGCAGGCGAAGGCGTTCGGCTTCCAGGGCAC GCCGGCCTTCATCGTCGGCCGGTTCCGGGTGCCGGGCGTGCTCGACGTCGCAATGTTCAAGCAGGCGATCAAGGACGCCC GCGCGGCGGCGGCGCAGCAGAAGAAATAA
Upstream 100 bases:
>100_bases ATCGTGCTGCGCGACAAATCGCCGACTCCGCCCGCCGGTCCGGTGGCAAAGGGATAGCATCGCCGGCCGATCCGGGGCAC AAAGGTCCGATCCCGCCACG
Downstream 100 bases:
>100_bases TCGTCGCCCGAGCGCGGAGCGAACAGGGGCGGCACCGCTGGTCGCGGCTCCGTTGGTTGATCTGAATCATCAAAGCGACG CAGCCGTGCGCTAGGCTGCG
Product: twin-arginine translocation pathway signal
Products: NA
Alternate protein names: Sodium/proton antiporter nhaA 2 [H]
Number of amino acids: Translated: 222; Mature: 222
Protein sequence:
>222_residues MELEPMMITRRSALMTALSLAPALAASKAWAAPAAPASDDNVLSTEAVLRDPDIPVAGNPDGDITIVEWSDYRCPYCKKV APDLRQVVKDDGKVRLVLKDWPIFGGISVDAAKMVLASKYQGKFFEAHDALIGSTAKLTSAGLTELLGAGGVDVARATRD LDTNGAAIEAILARNDAQAKAFGFQGTPAFIVGRFRVPGVLDVAMFKQAIKDARAAAAQQKK
Sequences:
>Translated_222_residues MELEPMMITRRSALMTALSLAPALAASKAWAAPAAPASDDNVLSTEAVLRDPDIPVAGNPDGDITIVEWSDYRCPYCKKV APDLRQVVKDDGKVRLVLKDWPIFGGISVDAAKMVLASKYQGKFFEAHDALIGSTAKLTSAGLTELLGAGGVDVARATRD LDTNGAAIEAILARNDAQAKAFGFQGTPAFIVGRFRVPGVLDVAMFKQAIKDARAAAAQQKK >Mature_222_residues MELEPMMITRRSALMTALSLAPALAASKAWAAPAAPASDDNVLSTEAVLRDPDIPVAGNPDGDITIVEWSDYRCPYCKKV APDLRQVVKDDGKVRLVLKDWPIFGGISVDAAKMVLASKYQGKFFEAHDALIGSTAKLTSAGLTELLGAGGVDVARATRD LDTNGAAIEAILARNDAQAKAFGFQGTPAFIVGRFRVPGVLDVAMFKQAIKDARAAAAQQKK
Specific function: Na(+)/H(+) antiporter that extrudes sodium in exchange for external protons [H]
COG id: COG1651
COG function: function code O; Protein-disulfide isomerase
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 thioredoxin domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001853 - InterPro: IPR023171 - InterPro: IPR004670 - InterPro: IPR017936 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF01323 DSBA; PF06965 Na_H_antiport_1 [H]
EC number: NA
Molecular weight: Translated: 23498; Mature: 23498
Theoretical pI: Translated: 8.20; Mature: 8.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MELEPMMITRRSALMTALSLAPALAASKAWAAPAAPASDDNVLSTEAVLRDPDIPVAGNP CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEHHHHHCCCCCCCCCCC DGDITIVEWSDYRCPYCKKVAPDLRQVVKDDGKVRLVLKDWPIFGGISVDAAKMVLASKY CCCEEEEEECCCCCCHHHHCCHHHHHHHHCCCCEEEEEECCCEECCCCHHHHHHHHHHHC QGKFFEAHDALIGSTAKLTSAGLTELLGAGGVDVARATRDLDTNGAAIEAILARNDAQAK CCCHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCHHHHHHHHCCCCCHH AFGFQGTPAFIVGRFRVPGVLDVAMFKQAIKDARAAAAQQKK CCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MELEPMMITRRSALMTALSLAPALAASKAWAAPAAPASDDNVLSTEAVLRDPDIPVAGNP CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEHHHHHCCCCCCCCCCC DGDITIVEWSDYRCPYCKKVAPDLRQVVKDDGKVRLVLKDWPIFGGISVDAAKMVLASKY CCCEEEEEECCCCCCHHHHCCHHHHHHHHCCCCEEEEEECCCEECCCCHHHHHHHHHHHC QGKFFEAHDALIGSTAKLTSAGLTELLGAGGVDVARATRDLDTNGAAIEAILARNDAQAK CCCHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCHHHHHHHHCCCCCHH AFGFQGTPAFIVGRFRVPGVLDVAMFKQAIKDARAAAAQQKK CCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA