| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is yeaX [C]
Identifier: 86751399
GI number: 86751399
Start: 4883242
End: 4884507
Strand: Reverse
Name: yeaX [C]
Synonym: RPB_4297
Alternate gene names: 86751399
Gene position: 4884507-4883242 (Counterclockwise)
Preceding gene: 86751400
Following gene: 86751398
Centisome position: 91.61
GC content: 70.38
Gene sequence:
>1266_bases GTGGCATCCCCCGCCGCGGCGCTGCAACGCTGGTCGATCCCGCTGCTCACGCTTTCCGTGCCGCTCGGATTCGTGGCGTG GGCGTTTCCGACAGGCCTCGCGCCGCTGCGCGCGGCCGGCATCGTCACCGGCTGGCTCGGCTGCGGGCTGCTGCTGGTGA GCCTGCTGCTGATGCTGCGCGAGCCGCGGCTCGCCTATTGGCTCGGCGGGCTGGAGCGGATGTATCGCTGGCATCACGTC ACCGGCGTCGTCGCTTATGTGGCGCTGCTGCTGCATCCGCTCGCGCTCGCCGCCGGCAATCTCGCCGCGTCGCCGCGCCT CGCCTGGCAGACGTTGTCGCCGGCGACGGAGAGCTGGCAGGTGTGGTCGGGTTGGCTCGGCCTGCTGCTGTTGATGGTCG GCCTCGCCACCACTTTCACCCCGAGCATCCGCTACGGCCTGTGGCGCTGGCTGCACGCGCTGCTCGGTATCGGCGTGGTG ATCGGTCTCGTGCATCTGATCCTGCTCGGCATCGACGAGCCGGTGCTGCCGATCCTCGCGGCGGCGGCAGGAATCCTCGG CTGGCGGCTGCTGCGCGGCGATCTCGGCCTCGCGGCGCGGCCCTATATCGTCGCGGCGGTGCGCAAGCTGACGCCGCAGT CCGTCGAGATCGAATTGCGCCCGCTGGCCGATCCGGTGACCGTGACCGCCGGGCAATTCGTGCTGGTCGCGTTCGGCAAC GGCCCGCTGTATCGCGGCTGCGGCGAATTCCATCCCTTCACCATCAGCGCGATCGATCGCGACGGCGCGCTGCGCCTGGC GGTGAAGGCGCTCGGCGATTGTACGCGGCGAATGCTGTCGATCGAGCCCGGCGTCGCGGCGCGGGTGATCGGCGGCTTCG GCGGCCTGCTCGGCGACGCCGGCGCATCGCCGCAATTGTGGATCGCCGGCGGCATCGGCGTCACGCCGTTCGTCGCTCTG CTGAACGAGGGCAGGCTGCGCCAGCCGGTGCGGCTGCTGTATCTGTATCGCCGCGAGGCCGATGCGACCTATCTGCCGGA GCTGCGCGCGATCGCGGCATCCGATCCGCAACTGAAATTGCAGGCGGTCGCCACCGGCGACGATCTGCCCGATCTCGATC GCCTGCTGCCCGCTACCAGCGAGTTGTCAGGCGTCGAGTGCTATCTGTGCGGGCCGGCGGGCCTGGTCGCGGCGCTGCAG CGGGCGCTCGGCGCGCGCGGGGTCGCCGCCCAGCACATCCACTTCGAAAACTTCGAGTTCAGATAA
Upstream 100 bases:
>100_bases GTGCAGCGCGCGCGCGAGCGCGGCCTCGATCTGCCGGGCGGCCATTGGGATTTCTGCAGCCGCCTGAAACGCGGCGCGCC GCCGCGGCCGGATTGAGCCG
Downstream 100 bases:
>100_bases TGCGCAGATTGTATTTCGCCGCCACCGCGACGTTCTGGATCGCCGTACTCGGCTTCTGGGCCGGCAGCGCGCTGACGCCG GTCACCCGGCAGCCGGCGGT
Product: oxidoreductase FAD/NAD(P)-binding
Products: NA
Alternate protein names: Ferric Reductase-Like Transmembrane Component-Like; Flavodoxin Oxidoreductase; Ferric Reductase Domain-Containing Protein; Flavocytochrome; Ferric Reductase Like Transmembrane Component Family; Flavocytochrome Subuit Of Oxidoreductase
Number of amino acids: Translated: 421; Mature: 420
Protein sequence:
>421_residues MASPAAALQRWSIPLLTLSVPLGFVAWAFPTGLAPLRAAGIVTGWLGCGLLLVSLLLMLREPRLAYWLGGLERMYRWHHV TGVVAYVALLLHPLALAAGNLAASPRLAWQTLSPATESWQVWSGWLGLLLLMVGLATTFTPSIRYGLWRWLHALLGIGVV IGLVHLILLGIDEPVLPILAAAAGILGWRLLRGDLGLAARPYIVAAVRKLTPQSVEIELRPLADPVTVTAGQFVLVAFGN GPLYRGCGEFHPFTISAIDRDGALRLAVKALGDCTRRMLSIEPGVAARVIGGFGGLLGDAGASPQLWIAGGIGVTPFVAL LNEGRLRQPVRLLYLYRREADATYLPELRAIAASDPQLKLQAVATGDDLPDLDRLLPATSELSGVECYLCGPAGLVAALQ RALGARGVAAQHIHFENFEFR
Sequences:
>Translated_421_residues MASPAAALQRWSIPLLTLSVPLGFVAWAFPTGLAPLRAAGIVTGWLGCGLLLVSLLLMLREPRLAYWLGGLERMYRWHHV TGVVAYVALLLHPLALAAGNLAASPRLAWQTLSPATESWQVWSGWLGLLLLMVGLATTFTPSIRYGLWRWLHALLGIGVV IGLVHLILLGIDEPVLPILAAAAGILGWRLLRGDLGLAARPYIVAAVRKLTPQSVEIELRPLADPVTVTAGQFVLVAFGN GPLYRGCGEFHPFTISAIDRDGALRLAVKALGDCTRRMLSIEPGVAARVIGGFGGLLGDAGASPQLWIAGGIGVTPFVAL LNEGRLRQPVRLLYLYRREADATYLPELRAIAASDPQLKLQAVATGDDLPDLDRLLPATSELSGVECYLCGPAGLVAALQ RALGARGVAAQHIHFENFEFR >Mature_420_residues ASPAAALQRWSIPLLTLSVPLGFVAWAFPTGLAPLRAAGIVTGWLGCGLLLVSLLLMLREPRLAYWLGGLERMYRWHHVT GVVAYVALLLHPLALAAGNLAASPRLAWQTLSPATESWQVWSGWLGLLLLMVGLATTFTPSIRYGLWRWLHALLGIGVVI GLVHLILLGIDEPVLPILAAAAGILGWRLLRGDLGLAARPYIVAAVRKLTPQSVEIELRPLADPVTVTAGQFVLVAFGNG PLYRGCGEFHPFTISAIDRDGALRLAVKALGDCTRRMLSIEPGVAARVIGGFGGLLGDAGASPQLWIAGGIGVTPFVALL NEGRLRQPVRLLYLYRREADATYLPELRAIAASDPQLKLQAVATGDDLPDLDRLLPATSELSGVECYLCGPAGLVAALQR ALGARGVAAQHIHFENFEFR
Specific function: Unknown
COG id: COG4097
COG function: function code P; Predicted ferric reductase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 1.-.-.- [C]
Molecular weight: Translated: 45036; Mature: 44904
Theoretical pI: Translated: 8.94; Mature: 8.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASPAAALQRWSIPLLTLSVPLGFVAWAFPTGLAPLRAAGIVTGWLGCGLLLVSLLLMLR CCCHHHHHHHCCCCEEEEHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC EPRLAYWLGGLERMYRWHHVTGVVAYVALLLHPLALAAGNLAASPRLAWQTLSPATESWQ CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCCCCHH VWSGWLGLLLLMVGLATTFTPSIRYGLWRWLHALLGIGVVIGLVHLILLGIDEPVLPILA HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH AAAGILGWRLLRGDLGLAARPYIVAAVRKLTPQSVEIELRPLADPVTVTAGQFVLVAFGN HHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCEEEEEEECCCCEEEECCCEEEEEECC GPLYRGCGEFHPFTISAIDRDGALRLAVKALGDCTRRMLSIEPGVAARVIGGFGGLLGDA CCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCC GASPQLWIAGGIGVTPFVALLNEGRLRQPVRLLYLYRREADATYLPELRAIAASDPQLKL CCCCCEEEECCCCHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHCCCCCEEE QAVATGDDLPDLDRLLPATSELSGVECYLCGPAGLVAALQRALGARGVAAQHIHFENFEF EEEECCCCCCCHHHHCCCCCCCCCCEEEEECCHHHHHHHHHHHCCCCCEEHEEECCCCCC R C >Mature Secondary Structure ASPAAALQRWSIPLLTLSVPLGFVAWAFPTGLAPLRAAGIVTGWLGCGLLLVSLLLMLR CCHHHHHHHCCCCEEEEHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC EPRLAYWLGGLERMYRWHHVTGVVAYVALLLHPLALAAGNLAASPRLAWQTLSPATESWQ CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCCCCHH VWSGWLGLLLLMVGLATTFTPSIRYGLWRWLHALLGIGVVIGLVHLILLGIDEPVLPILA HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH AAAGILGWRLLRGDLGLAARPYIVAAVRKLTPQSVEIELRPLADPVTVTAGQFVLVAFGN HHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCEEEEEEECCCCEEEECCCEEEEEECC GPLYRGCGEFHPFTISAIDRDGALRLAVKALGDCTRRMLSIEPGVAARVIGGFGGLLGDA CCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCC GASPQLWIAGGIGVTPFVALLNEGRLRQPVRLLYLYRREADATYLPELRAIAASDPQLKL CCCCCEEEECCCCHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHCCCCCEEE QAVATGDDLPDLDRLLPATSELSGVECYLCGPAGLVAALQRALGARGVAAQHIHFENFEF EEEECCCCCCCHHHHCCCCCCCCCCEEEEECCHHHHHHHHHHHCCCCCEEHEEECCCCCC R C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: FMN. [C]
Metal ions: Fe [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA