| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is 86751395
Identifier: 86751395
GI number: 86751395
Start: 4878217
End: 4878522
Strand: Reverse
Name: 86751395
Synonym: RPB_4293
Alternate gene names: NA
Gene position: 4878522-4878217 (Counterclockwise)
Preceding gene: 86751396
Following gene: 86751394
Centisome position: 91.5
GC content: 70.92
Gene sequence:
>306_bases ATGAGCCTGGTGATGCTGACGCTGGTCGCGCCGATGGCGCTGAAAGAAGACCTGGTCGCCGCGATGCTGGCGCACGGACC GACCGCGCAGGCCGGCTTTGTTGCGCGCGAGGTCGAAGGCTGTGGCGACCGCGTCGCCTACGACAGCTCGATCGAGCGGG TCCGCGGCCACAGGCTCGCCGTCGAGATCGTGGTGACCGCGCCGGAGCACGACATCCGCAGCCTGCTCGACGCGCTTCGC GCCGGGATGGCGGGGCGTGACGTCACATGGCGGATCGCCGCCGTGACGGCGGCCGGGACCCTTTAG
Upstream 100 bases:
>100_bases CGATCGTGGTGATCGGCGGGCTGGTGTCGTCGACGCTGCTGACGCTGGTGATCCTGCCGGTGCTGTATCGCCGTTTCGGC ATCGTGGCGGAGAAGGCGGC
Downstream 100 bases:
>100_bases TCCAGCGCCGACATCACGCGATCGACGGCGGCGCCGCCGGGATGCTTCACAATAACATATAGACGAATTCGTATTTCTCG ATTAGAGCGCCGCGAGACAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 101; Mature: 100
Protein sequence:
>101_residues MSLVMLTLVAPMALKEDLVAAMLAHGPTAQAGFVAREVEGCGDRVAYDSSIERVRGHRLAVEIVVTAPEHDIRSLLDALR AGMAGRDVTWRIAAVTAAGTL
Sequences:
>Translated_101_residues MSLVMLTLVAPMALKEDLVAAMLAHGPTAQAGFVAREVEGCGDRVAYDSSIERVRGHRLAVEIVVTAPEHDIRSLLDALR AGMAGRDVTWRIAAVTAAGTL >Mature_100_residues SLVMLTLVAPMALKEDLVAAMLAHGPTAQAGFVAREVEGCGDRVAYDSSIERVRGHRLAVEIVVTAPEHDIRSLLDALRA GMAGRDVTWRIAAVTAAGTL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10682; Mature: 10550
Theoretical pI: Translated: 6.24; Mature: 6.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 5.0 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLVMLTLVAPMALKEDLVAAMLAHGPTAQAGFVAREVEGCGDRVAYDSSIERVRGHRLA CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHCCCEEE VEIVVTAPEHDIRSLLDALRAGMAGRDVTWRIAAVTAAGTL EEEEEECCCHHHHHHHHHHHCCCCCCCCEEEEEEEEECCCC >Mature Secondary Structure SLVMLTLVAPMALKEDLVAAMLAHGPTAQAGFVAREVEGCGDRVAYDSSIERVRGHRLA HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHCCCEEE VEIVVTAPEHDIRSLLDALRAGMAGRDVTWRIAAVTAAGTL EEEEEECCCHHHHHHHHHHHCCCCCCCCEEEEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA