| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is 86751368
Identifier: 86751368
GI number: 86751368
Start: 4849183
End: 4849650
Strand: Reverse
Name: 86751368
Synonym: RPB_4265
Alternate gene names: NA
Gene position: 4849650-4849183 (Counterclockwise)
Preceding gene: 86751369
Following gene: 86751367
Centisome position: 90.96
GC content: 68.16
Gene sequence:
>468_bases ATGTCGCGCCCGCCATTGCCGCCGTTCACCCGCGAGACCGCCGCGCAAAAGGCGCGGATGGCCGAGGATGCCTGGAACTC CCGCGATCCCGTCAAGGTGTCGCTGGCCTATACGCCCGACAGCCGCTGGCGCAATCGCGGCGAGTTCTTTCAGGGCCGCG ACGCGATCGTCGACTTCCTGACCCGGAAATGGGCGAAGGAGCACGACTACCGGCTGGTCAAGGATCTGTGGGCGTTCGAC CGCCATTTCATCGCGGTGCGGTTCCAGTACGAATGGCACGACGATGCCGGGCAATGGCATCGCTCCTACGGCAACGAGCA ATGGGAGTTCGACGACGCCGGCCTGATGCGCCGCCGCGAGGCCAGCATCAACGACGTGGCGATCAAGGAAACCGAGCGCC GCTTCCACTGGCCGGCGCCGGGCCCGCGCCCCGCGGACGTGCCGGGGCTGGCGGCCGAGCCGTACTAG
Upstream 100 bases:
>100_bases GAGGAGGAGGCGAAGCCGGCGGAGACGAAACCGCGCGCTTGACTCGCTGTACCGATCGGTACAATCTTCGCCGCAACTCA TCCGCCGTGAAGATATCGCG
Downstream 100 bases:
>100_bases CGCCGCAATGACCGATCGCGCGGCTCTGCTGCCGCTGCTTGGCGAGGTGTTTCGCGCCCACGGCTACGAGGGCGCGTCGC TGGCGCTGATCTCGCAGGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 155; Mature: 154
Protein sequence:
>155_residues MSRPPLPPFTRETAAQKARMAEDAWNSRDPVKVSLAYTPDSRWRNRGEFFQGRDAIVDFLTRKWAKEHDYRLVKDLWAFD RHFIAVRFQYEWHDDAGQWHRSYGNEQWEFDDAGLMRRREASINDVAIKETERRFHWPAPGPRPADVPGLAAEPY
Sequences:
>Translated_155_residues MSRPPLPPFTRETAAQKARMAEDAWNSRDPVKVSLAYTPDSRWRNRGEFFQGRDAIVDFLTRKWAKEHDYRLVKDLWAFD RHFIAVRFQYEWHDDAGQWHRSYGNEQWEFDDAGLMRRREASINDVAIKETERRFHWPAPGPRPADVPGLAAEPY >Mature_154_residues SRPPLPPFTRETAAQKARMAEDAWNSRDPVKVSLAYTPDSRWRNRGEFFQGRDAIVDFLTRKWAKEHDYRLVKDLWAFDR HFIAVRFQYEWHDDAGQWHRSYGNEQWEFDDAGLMRRREASINDVAIKETERRFHWPAPGPRPADVPGLAAEPY
Specific function: Unknown
COG id: COG3558
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18404; Mature: 18272
Theoretical pI: Translated: 7.88; Mature: 7.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRPPLPPFTRETAAQKARMAEDAWNSRDPVKVSLAYTPDSRWRNRGEFFQGRDAIVDFL CCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEECCCHHHCCCCCCCCCHHHHHHHH TRKWAKEHDYRLVKDLWAFDRHFIAVRFQYEWHDDAGQWHRSYGNEQWEFDDAGLMRRRE HHHHHHHHHHHHHHHHHHHCCEEEEEEEEEEECCCHHHHHHHCCCCCCCCCCHHHHHHHC ASINDVAIKETERRFHWPAPGPRPADVPGLAAEPY CCCCHHHEEHHHHEEECCCCCCCCCCCCCCCCCCC >Mature Secondary Structure SRPPLPPFTRETAAQKARMAEDAWNSRDPVKVSLAYTPDSRWRNRGEFFQGRDAIVDFL CCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEECCCHHHCCCCCCCCCHHHHHHHH TRKWAKEHDYRLVKDLWAFDRHFIAVRFQYEWHDDAGQWHRSYGNEQWEFDDAGLMRRRE HHHHHHHHHHHHHHHHHHHCCEEEEEEEEEEECCCHHHHHHHCCCCCCCCCCHHHHHHHC ASINDVAIKETERRFHWPAPGPRPADVPGLAAEPY CCCCHHHEEHHHHEEECCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA