Definition Rhodopseudomonas palustris HaA2, complete genome.
Accession NC_007778
Length 5,331,656

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The map label for this gene is 86751368

Identifier: 86751368

GI number: 86751368

Start: 4849183

End: 4849650

Strand: Reverse

Name: 86751368

Synonym: RPB_4265

Alternate gene names: NA

Gene position: 4849650-4849183 (Counterclockwise)

Preceding gene: 86751369

Following gene: 86751367

Centisome position: 90.96

GC content: 68.16

Gene sequence:

>468_bases
ATGTCGCGCCCGCCATTGCCGCCGTTCACCCGCGAGACCGCCGCGCAAAAGGCGCGGATGGCCGAGGATGCCTGGAACTC
CCGCGATCCCGTCAAGGTGTCGCTGGCCTATACGCCCGACAGCCGCTGGCGCAATCGCGGCGAGTTCTTTCAGGGCCGCG
ACGCGATCGTCGACTTCCTGACCCGGAAATGGGCGAAGGAGCACGACTACCGGCTGGTCAAGGATCTGTGGGCGTTCGAC
CGCCATTTCATCGCGGTGCGGTTCCAGTACGAATGGCACGACGATGCCGGGCAATGGCATCGCTCCTACGGCAACGAGCA
ATGGGAGTTCGACGACGCCGGCCTGATGCGCCGCCGCGAGGCCAGCATCAACGACGTGGCGATCAAGGAAACCGAGCGCC
GCTTCCACTGGCCGGCGCCGGGCCCGCGCCCCGCGGACGTGCCGGGGCTGGCGGCCGAGCCGTACTAG

Upstream 100 bases:

>100_bases
GAGGAGGAGGCGAAGCCGGCGGAGACGAAACCGCGCGCTTGACTCGCTGTACCGATCGGTACAATCTTCGCCGCAACTCA
TCCGCCGTGAAGATATCGCG

Downstream 100 bases:

>100_bases
CGCCGCAATGACCGATCGCGCGGCTCTGCTGCCGCTGCTTGGCGAGGTGTTTCGCGCCCACGGCTACGAGGGCGCGTCGC
TGGCGCTGATCTCGCAGGCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 155; Mature: 154

Protein sequence:

>155_residues
MSRPPLPPFTRETAAQKARMAEDAWNSRDPVKVSLAYTPDSRWRNRGEFFQGRDAIVDFLTRKWAKEHDYRLVKDLWAFD
RHFIAVRFQYEWHDDAGQWHRSYGNEQWEFDDAGLMRRREASINDVAIKETERRFHWPAPGPRPADVPGLAAEPY

Sequences:

>Translated_155_residues
MSRPPLPPFTRETAAQKARMAEDAWNSRDPVKVSLAYTPDSRWRNRGEFFQGRDAIVDFLTRKWAKEHDYRLVKDLWAFD
RHFIAVRFQYEWHDDAGQWHRSYGNEQWEFDDAGLMRRREASINDVAIKETERRFHWPAPGPRPADVPGLAAEPY
>Mature_154_residues
SRPPLPPFTRETAAQKARMAEDAWNSRDPVKVSLAYTPDSRWRNRGEFFQGRDAIVDFLTRKWAKEHDYRLVKDLWAFDR
HFIAVRFQYEWHDDAGQWHRSYGNEQWEFDDAGLMRRREASINDVAIKETERRFHWPAPGPRPADVPGLAAEPY

Specific function: Unknown

COG id: COG3558

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18404; Mature: 18272

Theoretical pI: Translated: 7.88; Mature: 7.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRPPLPPFTRETAAQKARMAEDAWNSRDPVKVSLAYTPDSRWRNRGEFFQGRDAIVDFL
CCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEECCCHHHCCCCCCCCCHHHHHHHH
TRKWAKEHDYRLVKDLWAFDRHFIAVRFQYEWHDDAGQWHRSYGNEQWEFDDAGLMRRRE
HHHHHHHHHHHHHHHHHHHCCEEEEEEEEEEECCCHHHHHHHCCCCCCCCCCHHHHHHHC
ASINDVAIKETERRFHWPAPGPRPADVPGLAAEPY
CCCCHHHEEHHHHEEECCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SRPPLPPFTRETAAQKARMAEDAWNSRDPVKVSLAYTPDSRWRNRGEFFQGRDAIVDFL
CCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEECCCHHHCCCCCCCCCHHHHHHHH
TRKWAKEHDYRLVKDLWAFDRHFIAVRFQYEWHDDAGQWHRSYGNEQWEFDDAGLMRRRE
HHHHHHHHHHHHHHHHHHHCCEEEEEEEEEEECCCHHHHHHHCCCCCCCCCCHHHHHHHC
ASINDVAIKETERRFHWPAPGPRPADVPGLAAEPY
CCCCHHHEEHHHHEEECCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA