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The map label for this gene is yebA [C]

Identifier: 86751348

GI number: 86751348

Start: 4826867

End: 4828909

Strand: Direct

Name: yebA [C]

Synonym: RPB_4245

Alternate gene names: 86751348

Gene position: 4826867-4828909 (Clockwise)

Preceding gene: 86751341

Following gene: 86751349

Centisome position: 90.53

GC content: 67.99

Gene sequence:

>2043_bases
TTGTCACGGGGACGCAGCCACGGGCGCGAGGTCGGTTTCATCGACCTCGGCCACGAGCCCCCGCTTTCCGTCGATGGCAC
TGAAGCCGCGGTGATCGATCGCCGTCGCGTCTCGGTCCAATGGTTCAGCGGCACGATTCTGACCGGCCTGTGCGGCGCAG
CCTTGATCGGCGGCGCCGTTTTCGCGTCGCTCGACGGCGAAATGACCTTCGCCAAGGCGCCCGAGCGGGTCGAGGCCGCG
CTGCGCGGCGCCTTCGGCGCCGACAAGAACGCCGCCCTGCACAAGAGCGACCGCCTGCCCCCGCCCAGCGAATCGCAGGC
CGCGCGCAACGTGATCCGGGTCTCCTCGGTCTCGCGCGTCGGCAATCGCGACGTCGTCCGGGTGCGGCCCTACATCAAGA
TCGCCGGCAATCTGTCGCTGTCGACCACCGAACTGTCGGCCAAGATCCCGCCGTTCAACGCCCAGCGGATGCTCAGCGAC
GTCGGCGCCGCGGCGCCGGCGGCGGAAGACGCGCAGAATCCCGACGCCGTCGAGCCCGACGCCGAAGTCTCGTTCATCAC
CCGCGATCTCGGCCAGGTGCTGCCGCGGGCGAAGATCGCAGGCTTCATCCCGCCCGACGAAATCCTGATGCGGGTGCGCG
ACGCGGCGAACTGGAAGGGCAATAGCGGCGTGCGCTACGCCAGCGCCACCGCCGGGGATATCGGCGGCGGCGGCGGCGAT
ATGCGGCTCGGCTACGCGCCCGAAGGCGCCTCCGCCGACCCCTATGCGGGTTTCGAGACCCGCATCGTGCCGGAAAACGT
CACGCTGCTGCCGAAGACCAAGGAGCAGGTGACCGGCGGCAATGCCTCCGGCGAGCGCGTCCACATCGTCAAGAAGGGCG
ACACCGTCGTTTCGGTGCTGCGCGACCAGGGCGCCAGCGAGCTGGACGCCAATGCGGTGGCCCAAGCGCTCGGCGCGCGC
GGCCGCAACGGCGGGCTGAAGGAAGGCCAGAAGCTGCGGATCCTGATGGAGCCCTCCGGCGCCGCCAAGCAGCCGCAGCC
GTTCCGGGTGATCATCGCCAACGATTCGGCGGTCGAAGCGGTGGCGGCCTTGTCCGATCTCGGCCGCTACGTCGCGGTCG
ACGTCCAGGCCCTCAACACCGTCAGCGACACCGCCGACAACAGCGACGAGGACGAGGACGACGGCACCGGCGTGCGGCTG
TATCAGTCGATCTACGAGACCGCGATGCGCAACAAGGTGCCGCAGGCGATCATCGACGACATGATCAAGATCTACTCCTA
CGACGTCGATTTCCAGCGCAAGGTGCAGGCCGGCGACTCGTTCGAGGTGTTCTACGCCGGCGACGACGAGACCACCACAA
CGGTCGAGAAGAACGACGTGCTGTTCGCCGCGCTCACCGTCGGCGGCGAAACCAAGAAATACTACCGCTTCCAGACCCCC
GACGATTCGGTGGTGGATTTCTACGACGAGAGCGGCAAGAGCGCGAAGAAGTTCCTGGTGCGCAAGCCGGTCAACAACGC
GATCATGCGCTCCGGCTTCGGCGGCCGCCGCCATCCGATCCTCGGCTACGTCAAGATGCACACCGGCGTCGACTGGTCGA
CGCCCTACGGCACCCCGATTTTTGCCTCCGGCAACGGCGTGATCGAAAAGGCCGGCTGGGAAGGCGGCTACGGCAAATAC
ATCCGGATCAAGCACAACAACGGCTACGAGACCGCCTACGGCCACATGTCGGCCTTCGCCAAGGGCATGGAGCCCGGCAA
GCGGGTCCGCCAGGGCCAGGTGATCGGCTTCGTCGGCTCCACCGGCCTCTCCACCGGCGCGCATGTGCATTACGAAATTC
TCGTCAACGGCCGCTTCGTCGACCCGATGCGGGTGAAACTGCCGCGCGGCCGCTCGCTCGAAGGCCCGCTGCTGGCGTCC
TTCGAGAAAGAGCGCGACCGCCTCGACGCCATGCTGACCGGCCGCGGCGCCGGCCGCTTCGCCGAAGACCTCACCGCAGC
CACCCCGGTGCGCAGCGTCAACGCGGCGGCGGCGCGGAAGTAA

Upstream 100 bases:

>100_bases
CGATCGATCGCGCGACGCCTCCATCGGGTCAGGGACACTTGCCGGCCGGCGACGTCAGCGGGCGGGCGGGATTTTGGGGG
ACTGCGGATTGAGCCAGAGG

Downstream 100 bases:

>100_bases
GCACGGCGCGCAGCGTCGCGCGAGCGCGCCGGCGATTCAGTGCCGCACAAAGCGCTTCGCGGCGTGATGCGCGGCTGATC
CGCGGGCCCGGAGTTCTGCG

Product: peptidase M23B

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 680; Mature: 679

Protein sequence:

>680_residues
MSRGRSHGREVGFIDLGHEPPLSVDGTEAAVIDRRRVSVQWFSGTILTGLCGAALIGGAVFASLDGEMTFAKAPERVEAA
LRGAFGADKNAALHKSDRLPPPSESQAARNVIRVSSVSRVGNRDVVRVRPYIKIAGNLSLSTTELSAKIPPFNAQRMLSD
VGAAAPAAEDAQNPDAVEPDAEVSFITRDLGQVLPRAKIAGFIPPDEILMRVRDAANWKGNSGVRYASATAGDIGGGGGD
MRLGYAPEGASADPYAGFETRIVPENVTLLPKTKEQVTGGNASGERVHIVKKGDTVVSVLRDQGASELDANAVAQALGAR
GRNGGLKEGQKLRILMEPSGAAKQPQPFRVIIANDSAVEAVAALSDLGRYVAVDVQALNTVSDTADNSDEDEDDGTGVRL
YQSIYETAMRNKVPQAIIDDMIKIYSYDVDFQRKVQAGDSFEVFYAGDDETTTTVEKNDVLFAALTVGGETKKYYRFQTP
DDSVVDFYDESGKSAKKFLVRKPVNNAIMRSGFGGRRHPILGYVKMHTGVDWSTPYGTPIFASGNGVIEKAGWEGGYGKY
IRIKHNNGYETAYGHMSAFAKGMEPGKRVRQGQVIGFVGSTGLSTGAHVHYEILVNGRFVDPMRVKLPRGRSLEGPLLAS
FEKERDRLDAMLTGRGAGRFAEDLTAATPVRSVNAAAARK

Sequences:

>Translated_680_residues
MSRGRSHGREVGFIDLGHEPPLSVDGTEAAVIDRRRVSVQWFSGTILTGLCGAALIGGAVFASLDGEMTFAKAPERVEAA
LRGAFGADKNAALHKSDRLPPPSESQAARNVIRVSSVSRVGNRDVVRVRPYIKIAGNLSLSTTELSAKIPPFNAQRMLSD
VGAAAPAAEDAQNPDAVEPDAEVSFITRDLGQVLPRAKIAGFIPPDEILMRVRDAANWKGNSGVRYASATAGDIGGGGGD
MRLGYAPEGASADPYAGFETRIVPENVTLLPKTKEQVTGGNASGERVHIVKKGDTVVSVLRDQGASELDANAVAQALGAR
GRNGGLKEGQKLRILMEPSGAAKQPQPFRVIIANDSAVEAVAALSDLGRYVAVDVQALNTVSDTADNSDEDEDDGTGVRL
YQSIYETAMRNKVPQAIIDDMIKIYSYDVDFQRKVQAGDSFEVFYAGDDETTTTVEKNDVLFAALTVGGETKKYYRFQTP
DDSVVDFYDESGKSAKKFLVRKPVNNAIMRSGFGGRRHPILGYVKMHTGVDWSTPYGTPIFASGNGVIEKAGWEGGYGKY
IRIKHNNGYETAYGHMSAFAKGMEPGKRVRQGQVIGFVGSTGLSTGAHVHYEILVNGRFVDPMRVKLPRGRSLEGPLLAS
FEKERDRLDAMLTGRGAGRFAEDLTAATPVRSVNAAAARK
>Mature_679_residues
SRGRSHGREVGFIDLGHEPPLSVDGTEAAVIDRRRVSVQWFSGTILTGLCGAALIGGAVFASLDGEMTFAKAPERVEAAL
RGAFGADKNAALHKSDRLPPPSESQAARNVIRVSSVSRVGNRDVVRVRPYIKIAGNLSLSTTELSAKIPPFNAQRMLSDV
GAAAPAAEDAQNPDAVEPDAEVSFITRDLGQVLPRAKIAGFIPPDEILMRVRDAANWKGNSGVRYASATAGDIGGGGGDM
RLGYAPEGASADPYAGFETRIVPENVTLLPKTKEQVTGGNASGERVHIVKKGDTVVSVLRDQGASELDANAVAQALGARG
RNGGLKEGQKLRILMEPSGAAKQPQPFRVIIANDSAVEAVAALSDLGRYVAVDVQALNTVSDTADNSDEDEDDGTGVRLY
QSIYETAMRNKVPQAIIDDMIKIYSYDVDFQRKVQAGDSFEVFYAGDDETTTTVEKNDVLFAALTVGGETKKYYRFQTPD
DSVVDFYDESGKSAKKFLVRKPVNNAIMRSGFGGRRHPILGYVKMHTGVDWSTPYGTPIFASGNGVIEKAGWEGGYGKYI
RIKHNNGYETAYGHMSAFAKGMEPGKRVRQGQVIGFVGSTGLSTGAHVHYEILVNGRFVDPMRVKLPRGRSLEGPLLASF
EKERDRLDAMLTGRGAGRFAEDLTAATPVRSVNAAAARK

Specific function: Could Be Involved In Cell Wall Degradation Or Formation. [C]

COG id: COG0739

COG function: function code M; Membrane proteins related to metalloendopeptidases

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M23B family [H]

Homologues:

Organism=Escherichia coli, GI87081989, Length=222, Percent_Identity=34.2342342342342, Blast_Score=122, Evalue=5e-29,
Organism=Escherichia coli, GI87082174, Length=103, Percent_Identity=37.8640776699029, Blast_Score=64, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011055
- InterPro:   IPR007340
- InterPro:   IPR016047
- InterPro:   IPR002886 [H]

Pfam domain/function: PF04225 OapA; PF01551 Peptidase_M23 [H]

EC number: 3.4.24.- [C]

Molecular weight: Translated: 72828; Mature: 72697

Theoretical pI: Translated: 7.83; Mature: 7.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.1 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRGRSHGREVGFIDLGHEPPLSVDGTEAAVIDRRRVSVQWFSGTILTGLCGAALIGGAV
CCCCCCCCCEEEEEECCCCCCCCCCCCCEEEEECEEEEEEEECCHHHHHHHHHHHHHHHH
FASLDGEMTFAKAPERVEAALRGAFGADKNAALHKSDRLPPPSESQAARNVIRVSSVSRV
EEECCCCEEECCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHC
GNRDVVRVRPYIKIAGNLSLSTTELSAKIPPFNAQRMLSDVGAAAPAAEDAQNPDAVEPD
CCCCEEEEECEEEEECCCEEEEEECEECCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCC
AEVSFITRDLGQVLPRAKIAGFIPPDEILMRVRDAANWKGNSGVRYASATAGDIGGGGGD
CHHHHHHHHHHHHCCHHHHCCCCCHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCCC
MRLGYAPEGASADPYAGFETRIVPENVTLLPKTKEQVTGGNASGERVHIVKKGDTVVSVL
CEEEECCCCCCCCCCCCCEEEECCCCEEECCCCHHHHCCCCCCCCEEEEEECCCHHHHHH
RDQGASELDANAVAQALGARGRNGGLKEGQKLRILMEPSGAAKQPQPFRVIIANDSAVEA
HHCCCCCCCHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCCCCCEEEEEECCHHHHH
VAALSDLGRYVAVDVQALNTVSDTADNSDEDEDDGTGVRLYQSIYETAMRNKVPQAIIDD
HHHHHHCCCEEEEEHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHH
MIKIYSYDVDFQRKVQAGDSFEVFYAGDDETTTTVEKNDVLFAALTVGGETKKYYRFQTP
HHHHHCCCCCHHHHHCCCCCEEEEECCCCCCEEEEECCCEEEEEEEECCCCCEEEEECCC
DDSVVDFYDESGKSAKKFLVRKPVNNAIMRSGFGGRRHPILGYVKMHTGVDWSTPYGTPI
CCCHHHHHHCCCCHHHHHHHHCCCCHHHHHCCCCCCCCCEEEEEEEECCCCCCCCCCCEE
FASGNGVIEKAGWEGGYGKYIRIKHNNGYETAYGHMSAFAKGMEPGKRVRQGQVIGFVGS
EECCCCEEEECCCCCCCCCEEEEEECCCCCCHHHHHHHHHHCCCHHHHHCCCCEEEEECC
TGLSTGAHVHYEILVNGRFVDPMRVKLPRGRSLEGPLLASFEKERDRLDAMLTGRGAGRF
CCCCCCCEEEEEEEECCEEECCCEEECCCCCCCCCCHHHHHHHHHHHHHHHEECCCCCHH
AEDLTAATPVRSVNAAAARK
HHHHHHHCCCHHCCHHHCCC
>Mature Secondary Structure 
SRGRSHGREVGFIDLGHEPPLSVDGTEAAVIDRRRVSVQWFSGTILTGLCGAALIGGAV
CCCCCCCCEEEEEECCCCCCCCCCCCCEEEEECEEEEEEEECCHHHHHHHHHHHHHHHH
FASLDGEMTFAKAPERVEAALRGAFGADKNAALHKSDRLPPPSESQAARNVIRVSSVSRV
EEECCCCEEECCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHC
GNRDVVRVRPYIKIAGNLSLSTTELSAKIPPFNAQRMLSDVGAAAPAAEDAQNPDAVEPD
CCCCEEEEECEEEEECCCEEEEEECEECCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCC
AEVSFITRDLGQVLPRAKIAGFIPPDEILMRVRDAANWKGNSGVRYASATAGDIGGGGGD
CHHHHHHHHHHHHCCHHHHCCCCCHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCCC
MRLGYAPEGASADPYAGFETRIVPENVTLLPKTKEQVTGGNASGERVHIVKKGDTVVSVL
CEEEECCCCCCCCCCCCCEEEECCCCEEECCCCHHHHCCCCCCCCEEEEEECCCHHHHHH
RDQGASELDANAVAQALGARGRNGGLKEGQKLRILMEPSGAAKQPQPFRVIIANDSAVEA
HHCCCCCCCHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCCCCCEEEEEECCHHHHH
VAALSDLGRYVAVDVQALNTVSDTADNSDEDEDDGTGVRLYQSIYETAMRNKVPQAIIDD
HHHHHHCCCEEEEEHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHH
MIKIYSYDVDFQRKVQAGDSFEVFYAGDDETTTTVEKNDVLFAALTVGGETKKYYRFQTP
HHHHHCCCCCHHHHHCCCCCEEEEECCCCCCEEEEECCCEEEEEEEECCCCCEEEEECCC
DDSVVDFYDESGKSAKKFLVRKPVNNAIMRSGFGGRRHPILGYVKMHTGVDWSTPYGTPI
CCCHHHHHHCCCCHHHHHHHHCCCCHHHHHCCCCCCCCCEEEEEEEECCCCCCCCCCCEE
FASGNGVIEKAGWEGGYGKYIRIKHNNGYETAYGHMSAFAKGMEPGKRVRQGQVIGFVGS
EECCCCEEEECCCCCCCCCEEEEEECCCCCCHHHHHHHHHHCCCHHHHHCCCCEEEEECC
TGLSTGAHVHYEILVNGRFVDPMRVKLPRGRSLEGPLLASFEKERDRLDAMLTGRGAGRF
CCCCCCCEEEEEEEECCEEECCCEEECCCCCCCCCCHHHHHHHHHHHHHHHEECCCCCHH
AEDLTAATPVRSVNAAAARK
HHHHHHHCCCHHCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]