| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is 86751329
Identifier: 86751329
GI number: 86751329
Start: 4798219
End: 4798701
Strand: Reverse
Name: 86751329
Synonym: RPB_4223
Alternate gene names: NA
Gene position: 4798701-4798219 (Counterclockwise)
Preceding gene: 86751330
Following gene: 86751328
Centisome position: 90.0
GC content: 64.6
Gene sequence:
>483_bases ATGTCGAAGATTACGCCGTGCCTTTGGTTCGCCAGCGAAGCCGAGGAGGCGGCGAATTTCTACGTTTCGCTGCTGCCCGA CTCGCGGATCGAAACCGTGCAGCGCAGCGTGGTCGATACGCCCGGCGCCCCGGCGGGGGCGATCCTGCTGGTCGAGTTCA TCCTCGCCGGTCACCGCTACATGGCGCTCAACGGTGGCACGCCGATGAATTTCACCCACGCCGTGTCCTTCATGATCGAT TGCAAAGACCAGACCGAGGTCGACCGGCTGTGGGATGCGCTGCTCGACGGCGGCGTGGCGGATCAGTGTGGCTGGCTGCG GGATCGCTACGGGTTGTCCTGGCAGATCGTCCCGTCGATCCTGCCCAAGCTGTTCAACGGCCCAGACCGCGACGGCGCCC AACGGGCGATGCAGGCGATGATGGAGATGGTGAAGCTCGACGGCGACGCGCTGCAACGAGCCTACGATGGTGCGGCAGTA TAG
Upstream 100 bases:
>100_bases CTGAGGCGGCTTCGCCGGCCCCGGTCCGCGATCGATTCCAGCGGTGTCGGAATCGGCGATGCTCCTTCGTCCTCGGCATG ACGCTTCAAGGAGTCGTGCC
Downstream 100 bases:
>100_bases CGCAGGACCCTCTGAAATCGTGATCACTGACGATTATTGACAATCGTCAGTGATCATTCGACAGTTCCGCCGTCGCTTTT TGAGGGCCTGTCGATGTTTG
Product: 3-demethylubiquinone-9 3-methyltransferase
Products: NA
Alternate protein names: 3-Demethylubiquinone-9 3-Methyltransferase Family Protein; 3-Demethylubiquinone-9 3-Methyltransferase Domain Protein; 3-Demethylubiquinone-9 3-O-Methyltransferase; Methyltransferase; Signal Peptide; 3-Demethylubiquinone-93- Methyltransferase Protein; PhnB Protein; 3-Demethylubiquinone-9 3-Methyltransferase Family
Number of amino acids: Translated: 160; Mature: 159
Protein sequence:
>160_residues MSKITPCLWFASEAEEAANFYVSLLPDSRIETVQRSVVDTPGAPAGAILLVEFILAGHRYMALNGGTPMNFTHAVSFMID CKDQTEVDRLWDALLDGGVADQCGWLRDRYGLSWQIVPSILPKLFNGPDRDGAQRAMQAMMEMVKLDGDALQRAYDGAAV
Sequences:
>Translated_160_residues MSKITPCLWFASEAEEAANFYVSLLPDSRIETVQRSVVDTPGAPAGAILLVEFILAGHRYMALNGGTPMNFTHAVSFMID CKDQTEVDRLWDALLDGGVADQCGWLRDRYGLSWQIVPSILPKLFNGPDRDGAQRAMQAMMEMVKLDGDALQRAYDGAAV >Mature_159_residues SKITPCLWFASEAEEAANFYVSLLPDSRIETVQRSVVDTPGAPAGAILLVEFILAGHRYMALNGGTPMNFTHAVSFMIDC KDQTEVDRLWDALLDGGVADQCGWLRDRYGLSWQIVPSILPKLFNGPDRDGAQRAMQAMMEMVKLDGDALQRAYDGAAV
Specific function: Unknown
COG id: COG3865
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17584; Mature: 17453
Theoretical pI: Translated: 4.38; Mature: 4.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 5.0 %Met (Translated Protein) 6.9 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 6.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKITPCLWFASEAEEAANFYVSLLPDSRIETVQRSVVDTPGAPAGAILLVEFILAGHRY CCCCCHHHHHHHHHHHHHHHHHEECCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCEE MALNGGTPMNFTHAVSFMIDCKDQTEVDRLWDALLDGGVADQCGWLRDRYGLSWQIVPSI EEECCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHCCCCEEEHHHH LPKLFNGPDRDGAQRAMQAMMEMVKLDGDALQRAYDGAAV HHHHCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHCCCCC >Mature Secondary Structure SKITPCLWFASEAEEAANFYVSLLPDSRIETVQRSVVDTPGAPAGAILLVEFILAGHRY CCCCHHHHHHHHHHHHHHHHHEECCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCEE MALNGGTPMNFTHAVSFMIDCKDQTEVDRLWDALLDGGVADQCGWLRDRYGLSWQIVPSI EEECCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHCCCCEEEHHHH LPKLFNGPDRDGAQRAMQAMMEMVKLDGDALQRAYDGAAV HHHHCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA