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The map label for this gene is ysgA [C]

Identifier: 86751270

GI number: 86751270

Start: 4734851

End: 4735591

Strand: Direct

Name: ysgA [C]

Synonym: RPB_4163

Alternate gene names: 86751270

Gene position: 4734851-4735591 (Clockwise)

Preceding gene: 86751265

Following gene: 86751271

Centisome position: 88.81

GC content: 66.94

Gene sequence:

>741_bases
ATGATCGAGCAGCAGATCGAGATCCCGACCCTCGACGGCCGCGTCAGCACCTTCATCACCCATCCCGAACGCAACGGCCC
GCATCCGGTGGTGCTGCTGTTCATGGACGCGCCCGGCATCCGCGAGGAACTGCGCGACATGGCACGGCGGCTCGGAACCT
GCGGCTATTATGTGATGCTGCCGAGCCTGTATTACCGATCCGACGTGTTCGAACTCGGCCCGATCCCGGCCGACGACGAA
GCCCCCGAACGCAAGCGGATGTACGAATTGATGGGCTCGCTCAGCATCGCGATGGTGATGCAGGACGCCAAGGCGCTGCT
CGATTTCTCCGCGATGCAGCCCGCCGCCAGCAAGGGCCCGGCCGGCGCGGTCGGCTATTGCATGAGCGGACGTTACGCGA
TCAGCGCCGCCACGCACTTCCCCGACCGGGTCAAGGCCGCGGCGTCGATCTACGGCACCCATCTGGTGACCGACGCCGCC
GACAGCCCGCACCGCACCGCGCGGAAGGCGAGCGGCGAACTGTATTTCGCCTGCGCCGAGACCGACCGCTGGGCGCCGCC
GGAGATGATCGCAACGCTGCGCGAGTCGCTCGCCGCCGACGGCGTCGACGCCGAGGTGGAAATCTATCCCGGCACCCAGC
ACGCCTTCGCTTTTCCGCAGCGGCCGGTCTACAACCGCGAAGCCGCCGAACGGCATTGGGAACGACTTCTGGCGTTGTAC
CGGCGCAGGCTTCAGGGTTAA

Upstream 100 bases:

>100_bases
GCGCCCGCGACGGCGTCTCCGCCGCCTTGTCAGCGCCGGCATTCCTTGCGATGTTCCCGTCGGCATCGCAAGGCCCCATT
CGAGAGGACCGGTCGTCCGC

Downstream 100 bases:

>100_bases
GCGAACCGACAATGCCATTTTTCGCCATCGCCTTCCCCGTGTTCGATCCGGTCGCCGTCGCTGTCGGCCCGTTCGAAATC
CGCTGGTATGCGCTGGCCTA

Product: dienelactone hydrolase

Products: NA

Alternate protein names: Dienelactone hydrolase; DLH [H]

Number of amino acids: Translated: 246; Mature: 246

Protein sequence:

>246_residues
MIEQQIEIPTLDGRVSTFITHPERNGPHPVVLLFMDAPGIREELRDMARRLGTCGYYVMLPSLYYRSDVFELGPIPADDE
APERKRMYELMGSLSIAMVMQDAKALLDFSAMQPAASKGPAGAVGYCMSGRYAISAATHFPDRVKAAASIYGTHLVTDAA
DSPHRTARKASGELYFACAETDRWAPPEMIATLRESLAADGVDAEVEIYPGTQHAFAFPQRPVYNREAAERHWERLLALY
RRRLQG

Sequences:

>Translated_246_residues
MIEQQIEIPTLDGRVSTFITHPERNGPHPVVLLFMDAPGIREELRDMARRLGTCGYYVMLPSLYYRSDVFELGPIPADDE
APERKRMYELMGSLSIAMVMQDAKALLDFSAMQPAASKGPAGAVGYCMSGRYAISAATHFPDRVKAAASIYGTHLVTDAA
DSPHRTARKASGELYFACAETDRWAPPEMIATLRESLAADGVDAEVEIYPGTQHAFAFPQRPVYNREAAERHWERLLALY
RRRLQG
>Mature_246_residues
MIEQQIEIPTLDGRVSTFITHPERNGPHPVVLLFMDAPGIREELRDMARRLGTCGYYVMLPSLYYRSDVFELGPIPADDE
APERKRMYELMGSLSIAMVMQDAKALLDFSAMQPAASKGPAGAVGYCMSGRYAISAATHFPDRVKAAASIYGTHLVTDAA
DSPHRTARKASGELYFACAETDRWAPPEMIATLRESLAADGVDAEVEIYPGTQHAFAFPQRPVYNREAAERHWERLLALY
RRRLQG

Specific function: Unknown

COG id: COG0412

COG function: function code Q; Dienelactone hydrolase and related enzymes

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dienelactone hydrolase family [H]

Homologues:

Organism=Escherichia coli, GI48994982, Length=246, Percent_Identity=28.4552845528455, Blast_Score=92, Evalue=3e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002925
- InterPro:   IPR006311 [H]

Pfam domain/function: PF01738 DLH [H]

EC number: =3.1.1.45 [H]

Molecular weight: Translated: 27396; Mature: 27396

Theoretical pI: Translated: 6.17; Mature: 6.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIEQQIEIPTLDGRVSTFITHPERNGPHPVVLLFMDAPGIREELRDMARRLGTCGYYVML
CCCCCCCCCCCCCCEEEEEECCCCCCCCCEEEEEECCCCHHHHHHHHHHHHCCCCHHHHH
PSLYYRSDVFELGPIPADDEAPERKRMYELMGSLSIAMVMQDAKALLDFSAMQPAASKGP
HHHHHHCCCHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
AGAVGYCMSGRYAISAATHFPDRVKAAASIYGTHLVTDAADSPHRTARKASGELYFACAE
CCCHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHEECCCCCCHHHHHHCCCCEEEEEEC
TDRWAPPEMIATLRESLAADGVDAEVEIYPGTQHAFAFPQRPVYNREAAERHWERLLALY
CCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
RRRLQG
HHHHCC
>Mature Secondary Structure
MIEQQIEIPTLDGRVSTFITHPERNGPHPVVLLFMDAPGIREELRDMARRLGTCGYYVML
CCCCCCCCCCCCCCEEEEEECCCCCCCCCEEEEEECCCCHHHHHHHHHHHHCCCCHHHHH
PSLYYRSDVFELGPIPADDEAPERKRMYELMGSLSIAMVMQDAKALLDFSAMQPAASKGP
HHHHHHCCCHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
AGAVGYCMSGRYAISAATHFPDRVKAAASIYGTHLVTDAADSPHRTARKASGELYFACAE
CCCHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHEECCCCCCHHHHHHCCCCEEEEEEC
TDRWAPPEMIATLRESLAADGVDAEVEIYPGTQHAFAFPQRPVYNREAAERHWERLLALY
CCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
RRRLQG
HHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9168622 [H]