| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is 86751269
Identifier: 86751269
GI number: 86751269
Start: 4734370
End: 4734648
Strand: Reverse
Name: 86751269
Synonym: RPB_4162
Alternate gene names: NA
Gene position: 4734648-4734370 (Counterclockwise)
Preceding gene: 86751276
Following gene: 86751268
Centisome position: 88.8
GC content: 68.46
Gene sequence:
>279_bases ATGACCCAGACCAGCAACCGGATTTTCGACGAGATCGGCCGTCTGATGAACGACGCCGCCGGCGCGGCGCAGGGCGTCAA GCGCGAGGTCGATTCCGTGGTGCGCAGCCAGGCCGAAAAGATCCTGCGCGACCTCGACATCGTCAAGCGCGAGGAGTTCG AGGCGGTCAAGGACATGGCTCGGCTCGCCCGCGAGGAGAACGAAGCCCTCAAGGCGCGGATCGCGGCGCTCGAAGCCAAG CTCGGCGGCGGCTCCGAGCCCCCGACCGCGGTGGCGTGA
Upstream 100 bases:
>100_bases TGAAGTGCGCCGCCGCCATCGCCATTGTTTCGTCCAGGCTGGTTTCGGCCGGCAAGCGTTTCGACTGCAACCTCGCGCCA AGCGACCCGGAGTTCTCGAC
Downstream 100 bases:
>100_bases GCGGGCGCTGCCTGATTCACGGCCCGAGGGGGCAAGGCGCCCCCAGCGTGCACAATCGTCATGCCCGGGCTTGACCCGGG CATCCATCAAACTTCGCGAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 92; Mature: 91
Protein sequence:
>92_residues MTQTSNRIFDEIGRLMNDAAGAAQGVKREVDSVVRSQAEKILRDLDIVKREEFEAVKDMARLAREENEALKARIAALEAK LGGGSEPPTAVA
Sequences:
>Translated_92_residues MTQTSNRIFDEIGRLMNDAAGAAQGVKREVDSVVRSQAEKILRDLDIVKREEFEAVKDMARLAREENEALKARIAALEAK LGGGSEPPTAVA >Mature_91_residues TQTSNRIFDEIGRLMNDAAGAAQGVKREVDSVVRSQAEKILRDLDIVKREEFEAVKDMARLAREENEALKARIAALEAKL GGGSEPPTAVA
Specific function: Unknown
COG id: COG2960
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10025; Mature: 9893
Theoretical pI: Translated: 4.92; Mature: 4.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQTSNRIFDEIGRLMNDAAGAAQGVKREVDSVVRSQAEKILRDLDIVKREEFEAVKDMA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RLAREENEALKARIAALEAKLGGGSEPPTAVA HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure TQTSNRIFDEIGRLMNDAAGAAQGVKREVDSVVRSQAEKILRDLDIVKREEFEAVKDMA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RLAREENEALKARIAALEAKLGGGSEPPTAVA HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA