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The map label for this gene is 86751105

Identifier: 86751105

GI number: 86751105

Start: 4563958

End: 4564155

Strand: Reverse

Name: 86751105

Synonym: RPB_3997

Alternate gene names: NA

Gene position: 4564155-4563958 (Counterclockwise)

Preceding gene: 86751106

Following gene: 86751104

Centisome position: 85.6

GC content: 55.56

Gene sequence:

>198_bases
ATGAGTGACGGTTCCATCTCGGGACTTTCCGAAGCGGAAGCCAAGGAATTCCACTCGATCTTCGTGACGAGCTTCTTCCT
TTTCATCGTCGTCGCTGTGGTTGCTCACATCCTCGCCTGGATGTGGCGTCCGTGGCTGCCGAAAGCCACCGGCTATGCGA
TGGACAGCGTTCATCAACTGACTTCGGTCCTGTGCTAA

Upstream 100 bases:

>100_bases
GTAACTCGCTGTCGTTTCGGAAACGATACGGCAATCGTTGGCCGCCCGCGATCTTGGGCGGCGTGTCGGCCGATAAGGCC
ATCACTAGGAGGTGTACCAA

Downstream 100 bases:

>100_bases
GGGGAGACTACTATGTGGCGAATTTGGCTTCTGTTTGATCCGCGTCGCGCGCTGGTCCTGCTGTTCGTGTTCCTGTTCGG
CCTGGCCATCATCATCCACT

Product: antenna complex, alpha/beta subunit

Products: NA

Alternate protein names: Antenna pigment protein beta chain [H]

Number of amino acids: Translated: 65; Mature: 64

Protein sequence:

>65_residues
MSDGSISGLSEAEAKEFHSIFVTSFFLFIVVAVVAHILAWMWRPWLPKATGYAMDSVHQLTSVLC

Sequences:

>Translated_65_residues
MSDGSISGLSEAEAKEFHSIFVTSFFLFIVVAVVAHILAWMWRPWLPKATGYAMDSVHQLTSVLC
>Mature_64_residues
SDGSISGLSEAEAKEFHSIFVTSFFLFIVVAVVAHILAWMWRPWLPKATGYAMDSVHQLTSVLC

Specific function: Antenna complexes are light-harvesting systems, which transfer the excitation energy to the reaction centers [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Single-pass type II membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the antena complex beta subunit family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000066
- InterPro:   IPR002362 [H]

Pfam domain/function: PF00556 LHC [H]

EC number: NA

Molecular weight: Translated: 7230; Mature: 7099

Theoretical pI: Translated: 6.22; Mature: 6.22

Prosite motif: PS00969 ANTENNA_COMP_BETA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDGSISGLSEAEAKEFHSIFVTSFFLFIVVAVVAHILAWMWRPWLPKATGYAMDSVHQL
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH
TSVLC
HHHHC
>Mature Secondary Structure 
SDGSISGLSEAEAKEFHSIFVTSFFLFIVVAVVAHILAWMWRPWLPKATGYAMDSVHQL
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH
TSVLC
HHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 2669779 [H]