Definition Rhodopseudomonas palustris HaA2, complete genome.
Accession NC_007778
Length 5,331,656

Click here to switch to the map view.

The map label for this gene is 86751022

Identifier: 86751022

GI number: 86751022

Start: 4466433

End: 4466810

Strand: Direct

Name: 86751022

Synonym: RPB_3914

Alternate gene names: NA

Gene position: 4466433-4466810 (Clockwise)

Preceding gene: 86751021

Following gene: 86751023

Centisome position: 83.77

GC content: 67.46

Gene sequence:

>378_bases
ATGTCCGCAGACGGCTCGGACGAGTTCGGCAAGCGCCGCCCCCCGCCTCCAACGCCGGCCGTGCCGCCCCTCAAGCGATC
GCAAAAGGTGGTGCTGTTGGTGATGGGCACGATCGCGGTGGGCGCCACTGCCAATGCCCTGATGCCGAAGCAAAAGAGTA
ACGCCGAGGCGTCGGCGCACACCGCGACAAGCGAGGATCGCGGCACCTCATCCGCCTGGCAGAGCGGATCCGGAGGTGAT
TGGGCGCAATCGATCTTGGGCGACACGCGGCGCTCGTCCGGGGGTGGCTGGACGCAATCGATCGTGGGCGAGACCGACCG
CGGCGGATTCGGCTCGTTCGGGAACGCGTTCACTACGCATTTCTCGGGCGGCGGATAG

Upstream 100 bases:

>100_bases
CGCAGCGGATCGCCCAGGGCGAACTCGCGCCGGCGATCTGGCTCGGTTGTGCATCGCTTGCCGCCGGCGTCCTCAACGCT
GCGTCGATGGTGATCTGACT

Downstream 100 bases:

>100_bases
TCCAGCCGATGCGCCGGATCGCCTGCGCAGAACGCGACGACTGGGAAGCCACGGCCGCCGGCTGCGGATTCAATTTCCAT
AGCGCCTCCGGCCAGCGCTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 125; Mature: 124

Protein sequence:

>125_residues
MSADGSDEFGKRRPPPPTPAVPPLKRSQKVVLLVMGTIAVGATANALMPKQKSNAEASAHTATSEDRGTSSAWQSGSGGD
WAQSILGDTRRSSGGGWTQSIVGETDRGGFGSFGNAFTTHFSGGG

Sequences:

>Translated_125_residues
MSADGSDEFGKRRPPPPTPAVPPLKRSQKVVLLVMGTIAVGATANALMPKQKSNAEASAHTATSEDRGTSSAWQSGSGGD
WAQSILGDTRRSSGGGWTQSIVGETDRGGFGSFGNAFTTHFSGGG
>Mature_124_residues
SADGSDEFGKRRPPPPTPAVPPLKRSQKVVLLVMGTIAVGATANALMPKQKSNAEASAHTATSEDRGTSSAWQSGSGGDW
AQSILGDTRRSSGGGWTQSIVGETDRGGFGSFGNAFTTHFSGGG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12752; Mature: 12621

Theoretical pI: Translated: 10.19; Mature: 10.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSADGSDEFGKRRPPPPTPAVPPLKRSQKVVLLVMGTIAVGATANALMPKQKSNAEASAH
CCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCHHHCCCCCCCCCCCCCCCCCCCC
TATSEDRGTSSAWQSGSGGDWAQSILGDTRRSSGGGWTQSIVGETDRGGFGSFGNAFTTH
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHCCCCCCCCCCCCCCCEECC
FSGGG
CCCCC
>Mature Secondary Structure 
SADGSDEFGKRRPPPPTPAVPPLKRSQKVVLLVMGTIAVGATANALMPKQKSNAEASAH
CCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCHHHCCCCCCCCCCCCCCCCCCCC
TATSEDRGTSSAWQSGSGGDWAQSILGDTRRSSGGGWTQSIVGETDRGGFGSFGNAFTTH
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHCCCCCCCCCCCCCCCEECC
FSGGG
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA