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The map label for this gene is ybhN [C]

Identifier: 86750941

GI number: 86750941

Start: 4375641

End: 4376702

Strand: Direct

Name: ybhN [C]

Synonym: RPB_3833

Alternate gene names: 86750941

Gene position: 4375641-4376702 (Clockwise)

Preceding gene: 86750939

Following gene: 86750942

Centisome position: 82.07

GC content: 64.97

Gene sequence:

>1062_bases
ATGTATCGACTGCTGAGCGCGCTGGGGCGCGGCTTCAAGACGTATGTCGGGTGGAAACGGCTCGGCATCGTCGCGAGCAT
TCTGATCATCGGCTTTGCGATCACGTCGCTGGTCAACACCCTGAAGGGGGTCGACAGCGCCGTCATCCTGACCGCGCTGA
CGGAGAAGTCCCCAACTCAGATCGGGCTCGCCGCGCTGTTCGTGGTCGGCGCGTTCTGCACGCTGACCTTCTACGATTTC
TTCGCCCTGCGAACGATCGGCAAGCTGCACGTGCCGTACCGGATCGCGGCGCTGTCGGCCTTCACCTCTTATGTCATCGG
GCACAATCTCGGCGCCACGGTGTTCACCGGCGGCGCGATCCGGTTCCGGATCTATTCCGACTACGGCCTCACCGCGATCG
ACGTCGCCAAGATCTGCTTCATCTCCGGCCTGACGTTCTGGCTCGGTAACCTGTTCGTGCTCGGCATCGGCATGATCTGG
CACCCCGCCGCCGCCAGCGCGATGGATCTGTTGCCGGACAGCGTCAACCAGCTGATCGGCGTCGCCTGCCTCACCGGCAT
CGCGGCGTATTTCGTGTGGCTGGCGACCGGCAAGAAGCGCCGCCAGCTCGGCCAGAACGGCTGGAAGGTGGTACTGCCGT
CGGCCAAGCTGACGCTGGTGCAGGTGCTGATCGGCGTGGTCGATCTCGGCTTCTGCGCCATGGCGATGTACATGCTGATG
CCGTCCGAGCCCTATATCGACTTCGTCTCGCTGGCGGTGGTGTTCATCCTCGCCACGCTACTCGGCTTCGCCAGCCATGC
CCCCGGCAGCCTCGGCGTGTTCGACGCCGCGATGCTGGTGGCGCTGCCGATGTTCGCCCGCGAGGACATCATCGCCACGC
TGCTGATCTATCGCGTGTTGTATTTCCTGCTGCCGTTCGGCGTCGCGATCTCGATCCTCGGCATGCGCGAGCTGTGGCTG
AGCGTGATCAAGCCGTGGCAGGAGAAACGCGCCGGCAATGGCCACCCGGTCGCCGCGGCTCCGGTCCGGCAGATCGCGCA
GCGCCCGCGCAAGCAAGGCTGA

Upstream 100 bases:

>100_bases
TTATGCCCTAAGGAATTGCGCGGATGAGTTTGTCGGGTGCCGAGTGCCAGGCCGTGATACGTGCGGCTCCCGTCGCGTTG
CCGCCCCGCCGGGAGGACGA

Downstream 100 bases:

>100_bases
GCGCCGGCGCGGCGTCAAGACGAGGCGAGGCGGGCAGGTCCAGCCGGCCGTCGACGACCCGAACGATCTCCACGGCTTGA
AGCGGTCCCTCGTCGGTGCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 353; Mature: 353

Protein sequence:

>353_residues
MYRLLSALGRGFKTYVGWKRLGIVASILIIGFAITSLVNTLKGVDSAVILTALTEKSPTQIGLAALFVVGAFCTLTFYDF
FALRTIGKLHVPYRIAALSAFTSYVIGHNLGATVFTGGAIRFRIYSDYGLTAIDVAKICFISGLTFWLGNLFVLGIGMIW
HPAAASAMDLLPDSVNQLIGVACLTGIAAYFVWLATGKKRRQLGQNGWKVVLPSAKLTLVQVLIGVVDLGFCAMAMYMLM
PSEPYIDFVSLAVVFILATLLGFASHAPGSLGVFDAAMLVALPMFAREDIIATLLIYRVLYFLLPFGVAISILGMRELWL
SVIKPWQEKRAGNGHPVAAAPVRQIAQRPRKQG

Sequences:

>Translated_353_residues
MYRLLSALGRGFKTYVGWKRLGIVASILIIGFAITSLVNTLKGVDSAVILTALTEKSPTQIGLAALFVVGAFCTLTFYDF
FALRTIGKLHVPYRIAALSAFTSYVIGHNLGATVFTGGAIRFRIYSDYGLTAIDVAKICFISGLTFWLGNLFVLGIGMIW
HPAAASAMDLLPDSVNQLIGVACLTGIAAYFVWLATGKKRRQLGQNGWKVVLPSAKLTLVQVLIGVVDLGFCAMAMYMLM
PSEPYIDFVSLAVVFILATLLGFASHAPGSLGVFDAAMLVALPMFAREDIIATLLIYRVLYFLLPFGVAISILGMRELWL
SVIKPWQEKRAGNGHPVAAAPVRQIAQRPRKQG
>Mature_353_residues
MYRLLSALGRGFKTYVGWKRLGIVASILIIGFAITSLVNTLKGVDSAVILTALTEKSPTQIGLAALFVVGAFCTLTFYDF
FALRTIGKLHVPYRIAALSAFTSYVIGHNLGATVFTGGAIRFRIYSDYGLTAIDVAKICFISGLTFWLGNLFVLGIGMIW
HPAAASAMDLLPDSVNQLIGVACLTGIAAYFVWLATGKKRRQLGQNGWKVVLPSAKLTLVQVLIGVVDLGFCAMAMYMLM
PSEPYIDFVSLAVVFILATLLGFASHAPGSLGVFDAAMLVALPMFAREDIIATLLIYRVLYFLLPFGVAISILGMRELWL
SVIKPWQEKRAGNGHPVAAAPVRQIAQRPRKQG

Specific function: Unknown

COG id: COG0392

COG function: function code S; Predicted integral membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli ybhN [H]

Homologues:

Organism=Escherichia coli, GI1787006, Length=302, Percent_Identity=28.1456953642384, Blast_Score=83, Evalue=3e-17,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022791 [H]

Pfam domain/function: PF03706 UPF0104 [H]

EC number: NA

Molecular weight: Translated: 38230; Mature: 38230

Theoretical pI: Translated: 10.18; Mature: 10.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYRLLSALGRGFKTYVGWKRLGIVASILIIGFAITSLVNTLKGVDSAVILTALTEKSPTQ
CHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHH
IGLAALFVVGAFCTLTFYDFFALRTIGKLHVPYRIAALSAFTSYVIGHNLGATVFTGGAI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCEEECCEE
RFRIYSDYGLTAIDVAKICFISGLTFWLGNLFVLGIGMIWHPAAASAMDLLPDSVNQLIG
EEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCHHHHHHHHH
VACLTGIAAYFVWLATGKKRRQLGQNGWKVVLPSAKLTLVQVLIGVVDLGFCAMAMYMLM
HHHHHHHHHHHHHHHCCHHHHHHCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHC
PSEPYIDFVSLAVVFILATLLGFASHAPGSLGVFDAAMLVALPMFAREDIIATLLIYRVL
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YFLLPFGVAISILGMRELWLSVIKPWQEKRAGNGHPVAAAPVRQIAQRPRKQG
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCHHHHHHHHHCCCCCC
>Mature Secondary Structure
MYRLLSALGRGFKTYVGWKRLGIVASILIIGFAITSLVNTLKGVDSAVILTALTEKSPTQ
CHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHH
IGLAALFVVGAFCTLTFYDFFALRTIGKLHVPYRIAALSAFTSYVIGHNLGATVFTGGAI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCEEECCEE
RFRIYSDYGLTAIDVAKICFISGLTFWLGNLFVLGIGMIWHPAAASAMDLLPDSVNQLIG
EEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCHHHHHHHHH
VACLTGIAAYFVWLATGKKRRQLGQNGWKVVLPSAKLTLVQVLIGVVDLGFCAMAMYMLM
HHHHHHHHHHHHHHHCCHHHHHHCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHC
PSEPYIDFVSLAVVFILATLLGFASHAPGSLGVFDAAMLVALPMFAREDIIATLLIYRVL
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YFLLPFGVAISILGMRELWLSVIKPWQEKRAGNGHPVAAAPVRQIAQRPRKQG
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]