| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
Click here to switch to the map view.
The map label for this gene is flgI [H]
Identifier: 86750903
GI number: 86750903
Start: 4329776
End: 4330897
Strand: Direct
Name: flgI [H]
Synonym: RPB_3794
Alternate gene names: 86750903
Gene position: 4329776-4330897 (Clockwise)
Preceding gene: 86750900
Following gene: 86750904
Centisome position: 81.21
GC content: 68.0
Gene sequence:
>1122_bases ATGCCGAGCGTTTCCGCCGTGATCCTGAAGCTGGCCGCAGCCGCCCTGTCCGCGCTGCTGCTGTCGGGCGTGGCCGCCAA CGCCACCTCGCGGATCAAGGACCTCGCCAATATCGAGGGCGTGCGGCAGAACCAGTTGATCGGCTACGGCCTCGTGGTCG GCCTCAACGGCACCGGCGACACCCTCAACAACATTCCCTTCACCAAGCAGTCGCTGCAGGCGATGCTGGAGCGGATGGGC GTCAACATCCGCGGCGCCACCATCCGCACCGGCAACGTCGCGGCCGTGATGGTCACCGGCAATCTGCCCGCCTTCGCCAC CCAGGGCACCCGGATGGACGTCACCGTCTCGGCGCTCGGCGACGCCAAGAATCTGCAGGGCGGCACCCTGCTGGTCACGC CGCTGCTCGGCGCCGACGGCAATGTCTACGCGGTGGCCCAGGGCTCGCTCGCGATCGGCGGTTTCCAGGCCGAGGGCGAG GCCGCCAAGATCACCCGCGGCGTGCCGACCGTCGGCCGCATCGCCAACGGCGCGATCATCGAGCGCGAGATCGAATTCGC GCTGAACCGGCTGCCGATGGTGCGGCTGGCGCTGCGCAACGCCGATTTCACCACCGCCAAGCGGATCGCCGCCGCGGTCA ATGATTTCCTCGGCACCAAGAGCGCCGAGCCGATCGACCCCTCGACCGTGCAGCTCACGATCCCGGCGGAATTCAAAGGC AACGCGGTCGCCTTCGTCACCGAGATCGAGCAGTTGCAGGTCGAGCCGGACCAGGCCGCCAAGATCATCATCGACGAGCG CAGCGGCATCATCGTGATGGGCCGCGACGTCCGCGTCGCCACCGTCGCGGTGGCGCAGGGCAACCTCACGGTCTCGATCT CCGAAAGCCCGCAGGTCAGCCAGCCCAATCCGTTGGCGAACGGCCGCACCGTGGTCACGCCGAATTCGCGGATCGGCGTC ACCGAGGACGGCAAGAAGCTGGCGCTGGTCAAGGACGGCGTGTCGCTGCAACAGCTCGTCGATGGCCTCAATGGCCTGGG CATCGGCCCGCGCGACCTGATCGGCATCCTGCAGGCGATCAAGGCCGCCGGCGCCATCGAAGCCGATATCGAGGTGATGT GA
Upstream 100 bases:
>100_bases TCAATCGATTACGCCGCCTCGCCGGACTGGCACGGCTCTCGCAAGGGAAGCTGGCGTGACTGCGCTGCGTGCCGCCGCGT CAGCCGCCGAGGAGACTGGA
Downstream 100 bases:
>100_bases TGTCGATCGTTCCCACCACCTATGCGCGGACCGCCCTCACCCACGACGGCCGGCCCGACATCGACCTGAACGCCGCGCTG ACCAAGGTCTCGCCCAAGGC
Product: flagellar basal body P-ring protein
Products: NA
Alternate protein names: Basal body P-ring protein [H]
Number of amino acids: Translated: 373; Mature: 372
Protein sequence:
>373_residues MPSVSAVILKLAAAALSALLLSGVAANATSRIKDLANIEGVRQNQLIGYGLVVGLNGTGDTLNNIPFTKQSLQAMLERMG VNIRGATIRTGNVAAVMVTGNLPAFATQGTRMDVTVSALGDAKNLQGGTLLVTPLLGADGNVYAVAQGSLAIGGFQAEGE AAKITRGVPTVGRIANGAIIEREIEFALNRLPMVRLALRNADFTTAKRIAAAVNDFLGTKSAEPIDPSTVQLTIPAEFKG NAVAFVTEIEQLQVEPDQAAKIIIDERSGIIVMGRDVRVATVAVAQGNLTVSISESPQVSQPNPLANGRTVVTPNSRIGV TEDGKKLALVKDGVSLQQLVDGLNGLGIGPRDLIGILQAIKAAGAIEADIEVM
Sequences:
>Translated_373_residues MPSVSAVILKLAAAALSALLLSGVAANATSRIKDLANIEGVRQNQLIGYGLVVGLNGTGDTLNNIPFTKQSLQAMLERMG VNIRGATIRTGNVAAVMVTGNLPAFATQGTRMDVTVSALGDAKNLQGGTLLVTPLLGADGNVYAVAQGSLAIGGFQAEGE AAKITRGVPTVGRIANGAIIEREIEFALNRLPMVRLALRNADFTTAKRIAAAVNDFLGTKSAEPIDPSTVQLTIPAEFKG NAVAFVTEIEQLQVEPDQAAKIIIDERSGIIVMGRDVRVATVAVAQGNLTVSISESPQVSQPNPLANGRTVVTPNSRIGV TEDGKKLALVKDGVSLQQLVDGLNGLGIGPRDLIGILQAIKAAGAIEADIEVM >Mature_372_residues PSVSAVILKLAAAALSALLLSGVAANATSRIKDLANIEGVRQNQLIGYGLVVGLNGTGDTLNNIPFTKQSLQAMLERMGV NIRGATIRTGNVAAVMVTGNLPAFATQGTRMDVTVSALGDAKNLQGGTLLVTPLLGADGNVYAVAQGSLAIGGFQAEGEA AKITRGVPTVGRIANGAIIEREIEFALNRLPMVRLALRNADFTTAKRIAAAVNDFLGTKSAEPIDPSTVQLTIPAEFKGN AVAFVTEIEQLQVEPDQAAKIIIDERSGIIVMGRDVRVATVAVAQGNLTVSISESPQVSQPNPLANGRTVVTPNSRIGVT EDGKKLALVKDGVSLQQLVDGLNGLGIGPRDLIGILQAIKAAGAIEADIEVM
Specific function: Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation [H]
COG id: COG1706
COG function: function code N; Flagellar basal-body P-ring protein
Gene ontology:
Cell location: Periplasm. Bacterial flagellum basal body (By similarity) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the flgI family [H]
Homologues:
Organism=Escherichia coli, GI1787320, Length=360, Percent_Identity=44.4444444444444, Blast_Score=263, Evalue=2e-71,
Paralogues:
None
Copy number: 10-20 (rich media) [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001782 [H]
Pfam domain/function: PF02119 FlgI [H]
EC number: NA
Molecular weight: Translated: 38551; Mature: 38420
Theoretical pI: Translated: 5.53; Mature: 5.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSVSAVILKLAAAALSALLLSGVAANATSRIKDLANIEGVRQNQLIGYGLVVGLNGTGD CCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCEEEEEEEEEECCCCC TLNNIPFTKQSLQAMLERMGVNIRGATIRTGNVAAVMVTGNLPAFATQGTRMDVTVSALG CCCCCCCCHHHHHHHHHHHCCCEEEEEEECCCEEEEEEECCCCCEEECCCEEEEEEEECC DAKNLQGGTLLVTPLLGADGNVYAVAQGSLAIGGFQAEGEAAKITRGVPTVGRIANGAII CCCCCCCCEEEEEEEECCCCCEEEEEECCEEEECEECCCCHHEEECCCCCHHHHCCCEEE EREIEFALNRLPMVRLALRNADFTTAKRIAAAVNDFLGTKSAEPIDPSTVQLTIPAEFKG HHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCC NAVAFVTEIEQLQVEPDQAAKIIIDERSGIIVMGRDVRVATVAVAQGNLTVSISESPQVS CEEEEEEEHHHEECCCCCCEEEEEECCCCEEEEECCEEEEEEEEECCCEEEEECCCCCCC QPNPLANGRTVVTPNSRIGVTEDGKKLALVKDGVSLQQLVDGLNGLGIGPRDLIGILQAI CCCCCCCCCEEECCCCEECCCCCCCEEEEEECCCCHHHHHCCCCCCCCCHHHHHHHHHHH KAAGAIEADIEVM HHCCCCCEEEEEC >Mature Secondary Structure PSVSAVILKLAAAALSALLLSGVAANATSRIKDLANIEGVRQNQLIGYGLVVGLNGTGD CCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCEEEEEEEEEECCCCC TLNNIPFTKQSLQAMLERMGVNIRGATIRTGNVAAVMVTGNLPAFATQGTRMDVTVSALG CCCCCCCCHHHHHHHHHHHCCCEEEEEEECCCEEEEEEECCCCCEEECCCEEEEEEEECC DAKNLQGGTLLVTPLLGADGNVYAVAQGSLAIGGFQAEGEAAKITRGVPTVGRIANGAII CCCCCCCCEEEEEEEECCCCCEEEEEECCEEEECEECCCCHHEEECCCCCHHHHCCCEEE EREIEFALNRLPMVRLALRNADFTTAKRIAAAVNDFLGTKSAEPIDPSTVQLTIPAEFKG HHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCC NAVAFVTEIEQLQVEPDQAAKIIIDERSGIIVMGRDVRVATVAVAQGNLTVSISESPQVS CEEEEEEEHHHEECCCCCCEEEEEECCCCEEEEECCEEEEEEEEECCCEEEEECCCCCCC QPNPLANGRTVVTPNSRIGVTEDGKKLALVKDGVSLQQLVDGLNGLGIGPRDLIGILQAI CCCCCCCCCEEECCCCEECCCCCCCEEEEEECCCCHHHHHCCCCCCCCCHHHHHHHHHHH KAAGAIEADIEVM HHCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA