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The map label for this gene is flgH [H]

Identifier: 86750898

GI number: 86750898

Start: 4324434

End: 4325192

Strand: Direct

Name: flgH [H]

Synonym: RPB_3789

Alternate gene names: 86750898

Gene position: 4324434-4325192 (Clockwise)

Preceding gene: 86750897

Following gene: 86750899

Centisome position: 81.11

GC content: 65.22

Gene sequence:

>759_bases
ATGTTCAAGTCAGTATCGACCAACCGCATCGTCCTGATCACCGCGCTGCTCGCGACGGGAGGGCTCGCCGGCGGCTGCTC
CTCGATCGACCGCCTCGCCGCGATCGGTGAGAAACCGGCGCTGAGCGCGATCGAAAATCCGACCACGCAGCCCGGCTACA
AGCCGGTGCAGATGCCGATGCCGAAGCCCGAGGTGGCGTCCTACAATGCCAACTCGCTGTGGCGGAACGGCTCGCGCGCG
TTCTTCCGCGATCAGCGCGCCGCCAAGGTCGGCGACATCATGACGGTGACGGTGAACTTCACCGACAAGGCCGCGATCGC
CAACGAGACCAAGCGCAGCCGGAGTGGCAGCGAAGATTCCGGCATCACCGACTTCGCCGGCAGCAAGCTGCTAACCGGCG
ACGCCGCGCAGGTTCTGCCGGGCCGGATCTTGACAACCGACTCATCGTCATCCAGCGGCGGCAAGGGCACCGTCGACCGT
CAGGAAAAACTGCAGACCAGCGTCGCCGCGGTGGTGACGCAGGTGCTGCCGAACGGCAATCTGGTGGTCGAGGGCAAGCA
GGAAATCCGCGTCAATTTCGAAGTCCGCGAACTGATCGTCGCCGGCATCGTCCGCCCGGAAGACATTCAGAGCGACAACA
CCATCGACTCCAGCAAGATCGCGCAGGCCCGCATCGCCTATGGCGGCCGCGGCCAGATCACCGACGTGCAGCAGCCGCGC
TACGGCCAGCAGGTGATGGACGTGCTGCTGCCGTTCTGA

Upstream 100 bases:

>100_bases
TCGCCGTCCCGCGCATCCTCGCCAGCGCCAATCCCGCCGCAGCGCCGAACGCTGTTCCCACCGCCGCGCCCCCCGCCGCC
GCCAGGACCGAGTAAGTTCC

Downstream 100 bases:

>100_bases
TCCGCATGACCTGAACCAACGAGCTCCCACACCCGGCCGCGAACCTAGGCGCGGTCAGGTGTTCCGACGCGGCCTCCTCC
GGCTCTCCCCCGGACGGAGG

Product: flagellar basal body L-ring protein

Products: NA

Alternate protein names: Basal body L-ring protein [H]

Number of amino acids: Translated: 252; Mature: 252

Protein sequence:

>252_residues
MFKSVSTNRIVLITALLATGGLAGGCSSIDRLAAIGEKPALSAIENPTTQPGYKPVQMPMPKPEVASYNANSLWRNGSRA
FFRDQRAAKVGDIMTVTVNFTDKAAIANETKRSRSGSEDSGITDFAGSKLLTGDAAQVLPGRILTTDSSSSSGGKGTVDR
QEKLQTSVAAVVTQVLPNGNLVVEGKQEIRVNFEVRELIVAGIVRPEDIQSDNTIDSSKIAQARIAYGGRGQITDVQQPR
YGQQVMDVLLPF

Sequences:

>Translated_252_residues
MFKSVSTNRIVLITALLATGGLAGGCSSIDRLAAIGEKPALSAIENPTTQPGYKPVQMPMPKPEVASYNANSLWRNGSRA
FFRDQRAAKVGDIMTVTVNFTDKAAIANETKRSRSGSEDSGITDFAGSKLLTGDAAQVLPGRILTTDSSSSSGGKGTVDR
QEKLQTSVAAVVTQVLPNGNLVVEGKQEIRVNFEVRELIVAGIVRPEDIQSDNTIDSSKIAQARIAYGGRGQITDVQQPR
YGQQVMDVLLPF
>Mature_252_residues
MFKSVSTNRIVLITALLATGGLAGGCSSIDRLAAIGEKPALSAIENPTTQPGYKPVQMPMPKPEVASYNANSLWRNGSRA
FFRDQRAAKVGDIMTVTVNFTDKAAIANETKRSRSGSEDSGITDFAGSKLLTGDAAQVLPGRILTTDSSSSSGGKGTVDR
QEKLQTSVAAVVTQVLPNGNLVVEGKQEIRVNFEVRELIVAGIVRPEDIQSDNTIDSSKIAQARIAYGGRGQITDVQQPR
YGQQVMDVLLPF

Specific function: Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation [H]

COG id: COG2063

COG function: function code N; Flagellar basal body L-ring protein

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor (Probable). Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flgH family [H]

Homologues:

Organism=Escherichia coli, GI1787319, Length=204, Percent_Identity=28.4313725490196, Blast_Score=68, Evalue=5e-13,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000527 [H]

Pfam domain/function: PF02107 FlgH [H]

EC number: NA

Molecular weight: Translated: 26840; Mature: 26840

Theoretical pI: Translated: 9.44; Mature: 9.44

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFKSVSTNRIVLITALLATGGLAGGCSSIDRLAAIGEKPALSAIENPTTQPGYKPVQMPM
CCCCCCCCCEEEEEEHHHHCCCCCCHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCCCCCC
PKPEVASYNANSLWRNGSRAFFRDQRAAKVGDIMTVTVNFTDKAAIANETKRSRSGSEDS
CCCCCCCCCCHHHHCCCCHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHCCCCCCC
GITDFAGSKLLTGDAAQVLPGRILTTDSSSSSGGKGTVDRQEKLQTSVAAVVTQVLPNGN
CCCHHCCCEEECCCHHHHCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCC
LVVEGKQEIRVNFEVRELIVAGIVRPEDIQSDNTIDSSKIAQARIAYGGRGQITDVQQPR
EEEECCCEEEEEHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHEEECCCCCCCCCCCCC
YGQQVMDVLLPF
HHHHHHHHHCCC
>Mature Secondary Structure
MFKSVSTNRIVLITALLATGGLAGGCSSIDRLAAIGEKPALSAIENPTTQPGYKPVQMPM
CCCCCCCCCEEEEEEHHHHCCCCCCHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCCCCCC
PKPEVASYNANSLWRNGSRAFFRDQRAAKVGDIMTVTVNFTDKAAIANETKRSRSGSEDS
CCCCCCCCCCHHHHCCCCHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHCCCCCCC
GITDFAGSKLLTGDAAQVLPGRILTTDSSSSSGGKGTVDRQEKLQTSVAAVVTQVLPNGN
CCCHHCCCEEECCCHHHHCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCC
LVVEGKQEIRVNFEVRELIVAGIVRPEDIQSDNTIDSSKIAQARIAYGGRGQITDVQQPR
EEEECCCEEEEEHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHEEECCCCCCCCCCCCC
YGQQVMDVLLPF
HHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA